RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 NOS1P29475 1434 aa19.22■□□□□ 0.67
SIN3B-204ENST00000594372 KCNA6P17658 529 aa19.21■□□□□ 0.67
SIN3B-204ENST00000594372 FAM135BQ49AJ0 1406 aa19.21■□□□□ 0.67
SIN3B-204ENST00000594372 APLP2Q06481 763 aa19.2■□□□□ 0.66
SIN3B-204ENST00000594372 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
SIN3B-204ENST00000594372 TMEM131LA2VDJ0 1609 aa19.17■□□□□ 0.66
SIN3B-204ENST00000594372 NUTM2DQ5VT03 806 aaPredicted RBP19.16■□□□□ 0.66
SIN3B-204ENST00000594372 NKTRP30414 1462 aaKnown RBP19.16■□□□□ 0.66
SIN3B-204ENST00000594372 E9PCH4 1651 aa19.15■□□□□ 0.66
SIN3B-204ENST00000594372 ADGRL2O95490 1459 aa19.15■□□□□ 0.66
SIN3B-204ENST00000594372 ZFYVE9O95405 1425 aa19.14■□□□□ 0.65
SIN3B-204ENST00000594372 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
SIN3B-204ENST00000594372 COL16A1Q07092 1604 aaPredicted RBP19.12■□□□□ 0.65
SIN3B-204ENST00000594372 MSH6P52701 1360 aa19.12■□□□□ 0.65
SIN3B-204ENST00000594372 CHGAP10645 457 aaKnown RBP19.11■□□□□ 0.65
SIN3B-204ENST00000594372 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.11■□□□□ 0.65
SIN3B-204ENST00000594372 UNC13BO14795 1591 aa19.1■□□□□ 0.65
SIN3B-204ENST00000594372 ANKRD50Q9ULJ7 1429 aa19.1■□□□□ 0.65
SIN3B-204ENST00000594372 PPP1R15AO75807 674 aaPredicted RBP19.1■□□□□ 0.65
SIN3B-204ENST00000594372 PLEKHG1Q9ULL1 1385 aa19.08■□□□□ 0.65
SIN3B-204ENST00000594372 LRP6O75581 1613 aa19.08■□□□□ 0.65
SIN3B-204ENST00000594372 SLAIN2Q9P270 581 aa19.08■□□□□ 0.64
SIN3B-204ENST00000594372 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
SIN3B-204ENST00000594372 RPRD2Q5VT52 1461 aaKnown RBP19.07■□□□□ 0.64
SIN3B-204ENST00000594372 C14orf37Q86TY3 774 aa19.05■□□□□ 0.64
SIN3B-204ENST00000594372 ADAMTS13Q76LX8 1427 aa19.04■□□□□ 0.64
SIN3B-204ENST00000594372 JCADQ9P266 1359 aa19.04■□□□□ 0.64
SIN3B-204ENST00000594372 IQGAP3Q86VI3 1631 aa19.03■□□□□ 0.64
SIN3B-204ENST00000594372 SHPRHQ149N8 1683 aa19.01■□□□□ 0.63
SIN3B-204ENST00000594372 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
SIN3B-204ENST00000594372 PTPRUQ92729 1446 aa19■□□□□ 0.63
SIN3B-204ENST00000594372 AHDC1Q5TGY3 1603 aaPredicted RBP18.99■□□□□ 0.63
SIN3B-204ENST00000594372 ITGAEP38570 1179 aa18.98■□□□□ 0.63
SIN3B-204ENST00000594372 TRIM52Q96A61 297 aa18.98■□□□□ 0.63
SIN3B-204ENST00000594372 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
SIN3B-204ENST00000594372 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
SIN3B-204ENST00000594372 MEX3CQ5U5Q3 659 aaKnown RBP18.97■□□□□ 0.63
SIN3B-204ENST00000594372 TBX22Q9Y458 520 aa18.97■□□□□ 0.63
SIN3B-204ENST00000594372 PPARGC1BQ86YN6 1023 aaKnown RBP18.96■□□□□ 0.63
SIN3B-204ENST00000594372 TRPM2O94759 1503 aa18.95■□□□□ 0.62
SIN3B-204ENST00000594372 XRN1Q8IZH2 1706 aaKnown RBP18.95■□□□□ 0.62
SIN3B-204ENST00000594372 NUTM2BA6NNL0 878 aaPredicted RBP18.94■□□□□ 0.62
SIN3B-204ENST00000594372 NUTM2EB1AL46 878 aaPredicted RBP18.94■□□□□ 0.62
SIN3B-204ENST00000594372 NUTM2AQ8IVF1 878 aaPredicted RBP18.94■□□□□ 0.62
SIN3B-204ENST00000594372 ATF3P18847 181 aa18.93■□□□□ 0.62
SIN3B-204ENST00000594372 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
SIN3B-204ENST00000594372 AMOTL2Q9Y2J4 779 aa18.93■□□□□ 0.62
SIN3B-204ENST00000594372 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
SIN3B-204ENST00000594372 NUP155O75694 1391 aa18.92■□□□□ 0.62
SIN3B-204ENST00000594372 NALCNQ8IZF0 1738 aa18.91■□□□□ 0.62
SIN3B-204ENST00000594372 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
SIN3B-204ENST00000594372 NHSL1Q5SYE7 1610 aa18.91■□□□□ 0.62
SIN3B-204ENST00000594372 ASXL1Q8IXJ9 1541 aa18.9■□□□□ 0.62
SIN3B-204ENST00000594372 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
SIN3B-204ENST00000594372 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
SIN3B-204ENST00000594372 CADPS2Q86UW7 1296 aa18.89■□□□□ 0.61
SIN3B-204ENST00000594372 NCOA3Q9Y6Q9 1424 aa18.89■□□□□ 0.61
SIN3B-204ENST00000594372 CLTCL1P53675 1640 aa18.89■□□□□ 0.61
SIN3B-204ENST00000594372 SPATA31A6Q5VVP1 1343 aa18.88■□□□□ 0.61
SIN3B-204ENST00000594372 SETBP1Q9Y6X0 1596 aa18.86■□□□□ 0.61
SIN3B-204ENST00000594372 METP08581 1390 aa18.86■□□□□ 0.61
SIN3B-204ENST00000594372 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
SIN3B-204ENST00000594372 PIK3R4Q99570 1358 aa18.86■□□□□ 0.61
SIN3B-204ENST00000594372 UPF1Q92900 1129 aaKnown RBP eCLIP18.86■□□□□ 0.61
SIN3B-204ENST00000594372 KIF1BO60333 1816 aa18.86■□□□□ 0.61
SIN3B-204ENST00000594372 MST1RQ04912 1400 aa18.85■□□□□ 0.61
SIN3B-204ENST00000594372 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
SIN3B-204ENST00000594372 ZNF772Q68DY9 489 aaPredicted RBP18.84■□□□□ 0.61
SIN3B-204ENST00000594372 AFF2P51816 1311 aa18.83■□□□□ 0.61
SIN3B-204ENST00000594372 NEXMIFQ5QGS0 1516 aa18.83■□□□□ 0.6
SIN3B-204ENST00000594372 RXRBP28702 533 aa18.8■□□□□ 0.6
SIN3B-204ENST00000594372 DCCP43146 1447 aa18.79■□□□□ 0.6
SIN3B-204ENST00000594372 C8orf37Q96NL8 207 aa18.78■□□□□ 0.6
SIN3B-204ENST00000594372 RGS12O14924 1447 aa18.77■□□□□ 0.6
SIN3B-204ENST00000594372 SETD5Q9C0A6 1442 aa18.77■□□□□ 0.6
SIN3B-204ENST00000594372 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
SIN3B-204ENST00000594372 PNPLA6Q8IY17 1366 aa18.77■□□□□ 0.6
SIN3B-204ENST00000594372 ADAMTS2O95450 1211 aa18.75■□□□□ 0.59
SIN3B-204ENST00000594372 PPLO60437 1756 aa18.72■□□□□ 0.59
SIN3B-204ENST00000594372 C1orf167Q5SNV9 1468 aa18.71■□□□□ 0.59
SIN3B-204ENST00000594372 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
SIN3B-204ENST00000594372 ROBO2Q9HCK4 1378 aa18.7■□□□□ 0.58
SIN3B-204ENST00000594372 LRRC59Q96AG4 307 aaKnown RBP18.7■□□□□ 0.58
SIN3B-204ENST00000594372 ORAI2Q96SN7 254 aa18.7■□□□□ 0.58
SIN3B-204ENST00000594372 QTRT2Q9H974 415 aaKnown RBP18.7■□□□□ 0.58
SIN3B-204ENST00000594372 LAMC1P11047 1609 aa18.69■□□□□ 0.58
SIN3B-204ENST00000594372 NGLY1Q96IV0 654 aa18.67■□□□□ 0.58
SIN3B-204ENST00000594372 MARF1Q9Y4F3 1742 aaKnown RBP18.66■□□□□ 0.58
SIN3B-204ENST00000594372 NAIPQ13075 1403 aa18.66■□□□□ 0.58
SIN3B-204ENST00000594372 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
SIN3B-204ENST00000594372 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
SIN3B-204ENST00000594372 SRCAPQ6ZRS2 3230 aa18.64■□□□□ 0.57
SIN3B-204ENST00000594372 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
SIN3B-204ENST00000594372 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
SIN3B-204ENST00000594372 EP400Q96L91 3159 aa18.62■□□□□ 0.57
SIN3B-204ENST00000594372 RGPD8O14715 1765 aaPredicted RBP18.61■□□□□ 0.57
SIN3B-204ENST00000594372 FOXD1Q16676 465 aa18.61■□□□□ 0.57
SIN3B-204ENST00000594372 SOS2Q07890 1332 aaPredicted RBP18.6■□□□□ 0.57
SIN3B-204ENST00000594372 NUTM2FA1L443 756 aa18.6■□□□□ 0.57
SIN3B-204ENST00000594372 USP21Q9UK80 565 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms