RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 HRCP23327 699 aa23.94■■□□□ 1.42
USHBP1-204ENST00000594190 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
USHBP1-204ENST00000594190 ACIN1Q9UKV3 1341 aaKnown RBP23.92■■□□□ 1.42
USHBP1-204ENST00000594190 HFM1A2PYH4 1435 aa23.92■■□□□ 1.42
USHBP1-204ENST00000594190 SLC52A1Q9NWF4 448 aa23.91■■□□□ 1.42
USHBP1-204ENST00000594190 ZFYVE9O95405 1425 aa23.91■■□□□ 1.42
USHBP1-204ENST00000594190 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
USHBP1-204ENST00000594190 EID1Q9Y6B2 187 aa23.88■■□□□ 1.41
USHBP1-204ENST00000594190 NWD1Q149M9 1564 aa23.87■■□□□ 1.41
USHBP1-204ENST00000594190 CHD2O14647 1828 aaKnown RBP23.83■■□□□ 1.41
USHBP1-204ENST00000594190 RAB3GAP2Q9H2M9 1393 aa23.82■■□□□ 1.4
USHBP1-204ENST00000594190 STAG3Q9UJ98 1225 aa23.82■■□□□ 1.4
USHBP1-204ENST00000594190 NAIPQ13075 1403 aa23.82■■□□□ 1.4
USHBP1-204ENST00000594190 ZEB1P37275 1124 aaPredicted RBP23.8■■□□□ 1.4
USHBP1-204ENST00000594190 SENP3Q9H4L4 574 aaPredicted RBP23.8■■□□□ 1.4
USHBP1-204ENST00000594190 CCER1Q8TC90 406 aaPredicted RBP23.79■■□□□ 1.4
USHBP1-204ENST00000594190 SPHKAPQ2M3C7 1700 aa23.79■■□□□ 1.4
USHBP1-204ENST00000594190 PLEKHG1Q9ULL1 1385 aa23.78■■□□□ 1.4
USHBP1-204ENST00000594190 RIMS2Q9UQ26 1411 aa23.77■■□□□ 1.4
USHBP1-204ENST00000594190 KCNA6P17658 529 aa23.77■■□□□ 1.4
USHBP1-204ENST00000594190 NUP155O75694 1391 aa23.77■■□□□ 1.4
USHBP1-204ENST00000594190 NKTRP30414 1462 aaKnown RBP23.76■■□□□ 1.39
USHBP1-204ENST00000594190 SLC26A8Q96RN1 970 aa23.75■■□□□ 1.39
USHBP1-204ENST00000594190 CLSPNQ9HAW4 1339 aa23.75■■□□□ 1.39
USHBP1-204ENST00000594190 TMEM94Q12767 1356 aa23.73■■□□□ 1.39
USHBP1-204ENST00000594190 ADAMTS13Q76LX8 1427 aa23.72■■□□□ 1.39
USHBP1-204ENST00000594190 DIP2AQ14689 1571 aa23.7■■□□□ 1.38
USHBP1-204ENST00000594190 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
USHBP1-204ENST00000594190 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
USHBP1-204ENST00000594190 DHX57Q6P158 1386 aaKnown RBP23.67■■□□□ 1.38
USHBP1-204ENST00000594190 TBX22Q9Y458 520 aa23.66■■□□□ 1.38
USHBP1-204ENST00000594190 CLTCL1P53675 1640 aa23.66■■□□□ 1.38
USHBP1-204ENST00000594190 ROBO1Q9Y6N7 1651 aa23.65■■□□□ 1.38
USHBP1-204ENST00000594190 TRPM2O94759 1503 aa23.64■■□□□ 1.37
USHBP1-204ENST00000594190 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.63■■□□□ 1.37
USHBP1-204ENST00000594190 SETBP1Q9Y6X0 1596 aa23.62■■□□□ 1.37
USHBP1-204ENST00000594190 HDGFP51858 240 aaKnown RBP23.62■■□□□ 1.37
USHBP1-204ENST00000594190 PROSER2Q86WR7 435 aaPredicted RBP23.61■■□□□ 1.37
USHBP1-204ENST00000594190 RBM33Q96EV2 1170 aaKnown RBP23.61■■□□□ 1.37
USHBP1-204ENST00000594190 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
USHBP1-204ENST00000594190 NCOA3Q9Y6Q9 1424 aa23.59■■□□□ 1.37
USHBP1-204ENST00000594190 XRN1Q8IZH2 1706 aaKnown RBP23.59■■□□□ 1.37
USHBP1-204ENST00000594190 KIF1BO60333 1816 aa23.59■■□□□ 1.37
USHBP1-204ENST00000594190 NEXMIFQ5QGS0 1516 aa23.59■■□□□ 1.37
USHBP1-204ENST00000594190 PTPRUQ92729 1446 aa23.59■■□□□ 1.37
USHBP1-204ENST00000594190 PPP1R15AO75807 674 aaPredicted RBP23.58■■□□□ 1.37
USHBP1-204ENST00000594190 CHGAP10645 457 aaKnown RBP23.58■■□□□ 1.37
USHBP1-204ENST00000594190 NUTM2DQ5VT03 806 aaPredicted RBP23.58■■□□□ 1.37
USHBP1-204ENST00000594190 RGS17Q9UGC6 210 aaPredicted RBP23.58■■□□□ 1.37
USHBP1-204ENST00000594190 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.57■■□□□ 1.36
USHBP1-204ENST00000594190 BCANQ96GW7 911 aa23.54■■□□□ 1.36
USHBP1-204ENST00000594190 MSH6P52701 1360 aa23.53■■□□□ 1.36
USHBP1-204ENST00000594190 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
USHBP1-204ENST00000594190 TRIM52Q96A61 297 aa23.5■■□□□ 1.35
USHBP1-204ENST00000594190 PHLPP1O60346 1717 aa23.5■■□□□ 1.35
USHBP1-204ENST00000594190 COL16A1Q07092 1604 aaPredicted RBP23.48■■□□□ 1.35
USHBP1-204ENST00000594190 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
USHBP1-204ENST00000594190 PPLO60437 1756 aa23.47■■□□□ 1.35
USHBP1-204ENST00000594190 METP08581 1390 aa23.46■■□□□ 1.35
USHBP1-204ENST00000594190 AMOTL2Q9Y2J4 779 aa23.45■■□□□ 1.34
USHBP1-204ENST00000594190 POTEAQ6S8J7 498 aa23.44■■□□□ 1.34
USHBP1-204ENST00000594190 AHDC1Q5TGY3 1603 aaPredicted RBP23.43■■□□□ 1.34
USHBP1-204ENST00000594190 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
USHBP1-204ENST00000594190 C19orf44Q9H6X5 657 aa23.42■■□□□ 1.34
USHBP1-204ENST00000594190 DCCP43146 1447 aa23.42■■□□□ 1.34
USHBP1-204ENST00000594190 NALCNQ8IZF0 1738 aa23.41■■□□□ 1.34
USHBP1-204ENST00000594190 IFT172Q9UG01 1749 aa23.39■■□□□ 1.34
USHBP1-204ENST00000594190 ZNF326Q5BKZ1 582 aaKnown RBP23.39■■□□□ 1.33
USHBP1-204ENST00000594190 PRAG1Q86YV5 1406 aa23.39■■□□□ 1.33
USHBP1-204ENST00000594190 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
USHBP1-204ENST00000594190 CADPS2Q86UW7 1296 aa23.37■■□□□ 1.33
USHBP1-204ENST00000594190 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
USHBP1-204ENST00000594190 SHPRHQ149N8 1683 aa23.36■■□□□ 1.33
USHBP1-204ENST00000594190 NHSL1Q5SYE7 1610 aa23.35■■□□□ 1.33
USHBP1-204ENST00000594190 MST1RQ04912 1400 aa23.34■■□□□ 1.33
USHBP1-204ENST00000594190 SPATA31E1Q6ZUB1 1445 aa23.33■■□□□ 1.32
USHBP1-204ENST00000594190 ADGRL3Q9HAR2 1447 aa23.33■■□□□ 1.32
USHBP1-204ENST00000594190 RPGRIP1LQ68CZ1 1315 aa23.33■■□□□ 1.32
USHBP1-204ENST00000594190 JCADQ9P266 1359 aa23.32■■□□□ 1.32
USHBP1-204ENST00000594190 PTCH1Q13635 1447 aa23.32■■□□□ 1.32
USHBP1-204ENST00000594190 ASXL1Q8IXJ9 1541 aa23.31■■□□□ 1.32
USHBP1-204ENST00000594190 ATF3P18847 181 aa23.3■■□□□ 1.32
USHBP1-204ENST00000594190 FOXD1Q16676 465 aa23.3■■□□□ 1.32
USHBP1-204ENST00000594190 BRINP3Q76B58 766 aa23.3■■□□□ 1.32
USHBP1-204ENST00000594190 LAMC1P11047 1609 aa23.3■■□□□ 1.32
USHBP1-204ENST00000594190 VGFO15240 615 aaPredicted RBP23.29■■□□□ 1.32
USHBP1-204ENST00000594190 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
USHBP1-204ENST00000594190 LRP6O75581 1613 aa23.29■■□□□ 1.32
USHBP1-204ENST00000594190 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.31
USHBP1-204ENST00000594190 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
USHBP1-204ENST00000594190 CCDC144AA2RUR9 1427 aa23.25■■□□□ 1.31
USHBP1-204ENST00000594190 KNDC1Q76NI1 1749 aa23.22■■□□□ 1.31
USHBP1-204ENST00000594190 MEX3CQ5U5Q3 659 aaKnown RBP23.21■■□□□ 1.31
USHBP1-204ENST00000594190 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
USHBP1-204ENST00000594190 ADGRF5Q8IZF2 1346 aa23.21■■□□□ 1.31
USHBP1-204ENST00000594190 C1orf167Q5SNV9 1468 aa23.19■■□□□ 1.3
USHBP1-204ENST00000594190 TECPR2O15040 1411 aa23.18■■□□□ 1.3
USHBP1-204ENST00000594190 PIK3C2GO75747 1445 aa23.18■■□□□ 1.3
USHBP1-204ENST00000594190 ZNF772Q68DY9 489 aaPredicted RBP23.18■■□□□ 1.3
USHBP1-204ENST00000594190 SIN3AQ96ST3 1273 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms