RNA–Protein interactions for RNA: ENST00000593361.5

DDX49-202, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-202ENST00000593361 RIMS2Q9UQ26 1411 aa18.8■□□□□ 0.6
DDX49-202ENST00000593361 NEUROD1Q13562 356 aa18.79■□□□□ 0.6
DDX49-202ENST00000593361 SCAF11Q99590 1463 aaKnown RBP18.78■□□□□ 0.6
DDX49-202ENST00000593361 RGL3Q3MIN7 710 aa18.78■□□□□ 0.6
DDX49-202ENST00000593361 STRCQ7RTU9 1775 aa18.77■□□□□ 0.6
DDX49-202ENST00000593361 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
DDX49-202ENST00000593361 EID1Q9Y6B2 187 aa18.74■□□□□ 0.59
DDX49-202ENST00000593361 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
DDX49-202ENST00000593361 LTKP29376 864 aa18.73■□□□□ 0.59
DDX49-202ENST00000593361 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
DDX49-202ENST00000593361 TXNDC2Q86VQ3 553 aa18.73■□□□□ 0.59
DDX49-202ENST00000593361 ANKLE2Q86XL3 938 aa18.73■□□□□ 0.59
DDX49-202ENST00000593361 IQGAP1P46940 1657 aa18.73■□□□□ 0.59
DDX49-202ENST00000593361 MYOM2P54296 1465 aa18.72■□□□□ 0.59
DDX49-202ENST00000593361 TONSLQ96HA7 1378 aa18.72■□□□□ 0.59
DDX49-202ENST00000593361 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.72■□□□□ 0.59
DDX49-202ENST00000593361 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
DDX49-202ENST00000593361 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
DDX49-202ENST00000593361 MED14O60244 1454 aa18.71■□□□□ 0.59
DDX49-202ENST00000593361 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
DDX49-202ENST00000593361 PLEKHG1Q9ULL1 1385 aa18.69■□□□□ 0.58
DDX49-202ENST00000593361 NPHP4O75161 1426 aaPredicted RBP18.69■□□□□ 0.58
DDX49-202ENST00000593361 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
DDX49-202ENST00000593361 NRXN3Q9Y4C0 1643 aa18.68■□□□□ 0.58
DDX49-202ENST00000593361 DCAF11Q8TEB1 546 aa18.68■□□□□ 0.58
DDX49-202ENST00000593361 L3MBTL2Q969R5 705 aa18.68■□□□□ 0.58
DDX49-202ENST00000593361 NRXN1Q9ULB1 1477 aa18.67■□□□□ 0.58
DDX49-202ENST00000593361 VGFO15240 615 aaPredicted RBP18.67■□□□□ 0.58
DDX49-202ENST00000593361 ADGRF5Q8IZF2 1346 aa18.66■□□□□ 0.58
DDX49-202ENST00000593361 PIK3C2GO75747 1445 aa18.66■□□□□ 0.58
DDX49-202ENST00000593361 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
DDX49-202ENST00000593361 KDM2AQ9Y2K7 1162 aa18.65■□□□□ 0.58
DDX49-202ENST00000593361 DIP2AQ14689 1571 aa18.64■□□□□ 0.58
DDX49-202ENST00000593361 LAMC1P11047 1609 aa18.63■□□□□ 0.57
DDX49-202ENST00000593361 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
DDX49-202ENST00000593361 BCANQ96GW7 911 aa18.63■□□□□ 0.57
DDX49-202ENST00000593361 STAC3Q96MF2 364 aa18.63■□□□□ 0.57
DDX49-202ENST00000593361 ADAMTS13Q76LX8 1427 aa18.62■□□□□ 0.57
DDX49-202ENST00000593361 PRAG1Q86YV5 1406 aa18.62■□□□□ 0.57
DDX49-202ENST00000593361 ALKQ9UM73 1620 aa18.61■□□□□ 0.57
DDX49-202ENST00000593361 TIMELESSQ9UNS1 1208 aa18.6■□□□□ 0.57
DDX49-202ENST00000593361 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
DDX49-202ENST00000593361 KIAA1210Q9ULL0 1709 aa18.58■□□□□ 0.57
DDX49-202ENST00000593361 SLC26A8Q96RN1 970 aa18.58■□□□□ 0.56
DDX49-202ENST00000593361 TRPM1Q7Z4N2 1603 aa18.57■□□□□ 0.56
DDX49-202ENST00000593361 ASXL1Q8IXJ9 1541 aa18.56■□□□□ 0.56
DDX49-202ENST00000593361 TBX22Q9Y458 520 aa18.54■□□□□ 0.56
DDX49-202ENST00000593361 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
DDX49-202ENST00000593361 CFAP70Q5T0N1 1121 aa18.53■□□□□ 0.56
DDX49-202ENST00000593361 METP08581 1390 aa18.53■□□□□ 0.56
DDX49-202ENST00000593361 ADGRB1O14514 1584 aa18.52■□□□□ 0.56
DDX49-202ENST00000593361 NWD1Q149M9 1564 aa18.52■□□□□ 0.56
DDX49-202ENST00000593361 NBPF8Q3BBV2 869 aa18.52■□□□□ 0.56
DDX49-202ENST00000593361 C14orf93Q9H972 538 aaKnown RBP18.52■□□□□ 0.56
DDX49-202ENST00000593361 RALGAPBQ86X10 1494 aa18.52■□□□□ 0.55
DDX49-202ENST00000593361 XRN1Q8IZH2 1706 aaKnown RBP18.52■□□□□ 0.55
DDX49-202ENST00000593361 STRCP1A6NGW2 1772 aa18.51■□□□□ 0.55
DDX49-202ENST00000593361 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
DDX49-202ENST00000593361 KNDC1Q76NI1 1749 aa18.49■□□□□ 0.55
DDX49-202ENST00000593361 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
DDX49-202ENST00000593361 ZNF335Q9H4Z2 1342 aaPredicted RBP18.48■□□□□ 0.55
DDX49-202ENST00000593361 ROCK2O75116 1388 aaKnown RBP18.47■□□□□ 0.55
DDX49-202ENST00000593361 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
DDX49-202ENST00000593361 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
DDX49-202ENST00000593361 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
DDX49-202ENST00000593361 LRPPRCP42704 1394 aaKnown RBP18.45■□□□□ 0.54
DDX49-202ENST00000593361 NBPF1Q3BBV0 1214 aa18.45■□□□□ 0.54
DDX49-202ENST00000593361 CPS1P31327 1500 aa18.44■□□□□ 0.54
DDX49-202ENST00000593361 KCNA6P17658 529 aa18.44■□□□□ 0.54
DDX49-202ENST00000593361 GPRASP1Q5JY77 1395 aa18.43■□□□□ 0.54
DDX49-202ENST00000593361 ARHGEF28Q8N1W1 1705 aaKnown RBP18.43■□□□□ 0.54
DDX49-202ENST00000593361 TECPR2O15040 1411 aa18.43■□□□□ 0.54
DDX49-202ENST00000593361 PTCH1Q13635 1447 aa18.43■□□□□ 0.54
DDX49-202ENST00000593361 LTBP4Q8N2S1 1624 aa18.43■□□□□ 0.54
DDX49-202ENST00000593361 AMOTL2Q9Y2J4 779 aa18.43■□□□□ 0.54
DDX49-202ENST00000593361 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
DDX49-202ENST00000593361 STK26Q9P289 416 aa18.41■□□□□ 0.54
DDX49-202ENST00000593361 ABCC11Q96J66 1382 aa18.41■□□□□ 0.54
DDX49-202ENST00000593361 ROBO2Q9HCK4 1378 aa18.4■□□□□ 0.54
DDX49-202ENST00000593361 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.53
DDX49-202ENST00000593361 TRAK1Q9UPV9 953 aa18.38■□□□□ 0.53
DDX49-202ENST00000593361 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
DDX49-202ENST00000593361 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
DDX49-202ENST00000593361 FAM135BQ49AJ0 1406 aa18.36■□□□□ 0.53
DDX49-202ENST00000593361 NALCNQ8IZF0 1738 aa18.35■□□□□ 0.53
DDX49-202ENST00000593361 TMEM94Q12767 1356 aa18.34■□□□□ 0.53
DDX49-202ENST00000593361 EIF3AQ14152 1382 aaKnown RBP18.34■□□□□ 0.53
DDX49-202ENST00000593361 PLEKHH1Q9ULM0 1364 aa18.34■□□□□ 0.53
DDX49-202ENST00000593361 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
DDX49-202ENST00000593361 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
DDX49-202ENST00000593361 USP47Q96K76 1375 aa18.32■□□□□ 0.52
DDX49-202ENST00000593361 RBM33Q96EV2 1170 aaKnown RBP18.32■□□□□ 0.52
DDX49-202ENST00000593361 PRAM1Q96QH2 718 aa18.32■□□□□ 0.52
DDX49-202ENST00000593361 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.32■□□□□ 0.52
DDX49-202ENST00000593361 WAPLQ7Z5K2 1190 aa18.31■□□□□ 0.52
DDX49-202ENST00000593361 SIRT1Q96EB6 747 aa18.31■□□□□ 0.52
DDX49-202ENST00000593361 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
DDX49-202ENST00000593361 POGKQ9P215 609 aa18.3■□□□□ 0.52
DDX49-202ENST00000593361 ADGRL3Q9HAR2 1447 aa18.3■□□□□ 0.52
DDX49-202ENST00000593361 CENPJQ9HC77 1338 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms