RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 SETD1AO15047 1707 aaKnown RBP15.99■□□□□ 0.15
SMCO4P1-201ENST00000592909 PHLPP1O60346 1717 aa15.99■□□□□ 0.15
SMCO4P1-201ENST00000592909 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
SMCO4P1-201ENST00000592909 HDGFP51858 240 aaKnown RBP15.98■□□□□ 0.15
SMCO4P1-201ENST00000592909 TBX22Q9Y458 520 aa15.98■□□□□ 0.15
SMCO4P1-201ENST00000592909 ADGRB3O60242 1522 aa15.98■□□□□ 0.15
SMCO4P1-201ENST00000592909 LRP6O75581 1613 aa15.97■□□□□ 0.15
SMCO4P1-201ENST00000592909 DAPK1P53355 1430 aa15.97■□□□□ 0.15
SMCO4P1-201ENST00000592909 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
SMCO4P1-201ENST00000592909 TRIM52Q96A61 297 aa15.97■□□□□ 0.15
SMCO4P1-201ENST00000592909 ANKRD30AQ9BXX3 1397 aa15.97■□□□□ 0.15
SMCO4P1-201ENST00000592909 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
SMCO4P1-201ENST00000592909 ZFYVE9O95405 1425 aa15.96■□□□□ 0.15
SMCO4P1-201ENST00000592909 CADPS2Q86UW7 1296 aa15.96■□□□□ 0.15
SMCO4P1-201ENST00000592909 RXRBP28702 533 aa15.95■□□□□ 0.14
SMCO4P1-201ENST00000592909 PPP1R15AO75807 674 aaPredicted RBP15.94■□□□□ 0.14
SMCO4P1-201ENST00000592909 C19orf44Q9H6X5 657 aa15.94■□□□□ 0.14
SMCO4P1-201ENST00000592909 CHIC2Q9UKJ5 165 aa15.93■□□□□ 0.14
SMCO4P1-201ENST00000592909 RIMS2Q9UQ26 1411 aa15.93■□□□□ 0.14
SMCO4P1-201ENST00000592909 RPRD2Q5VT52 1461 aaKnown RBP15.92■□□□□ 0.14
SMCO4P1-201ENST00000592909 ATF3P18847 181 aa15.92■□□□□ 0.14
SMCO4P1-201ENST00000592909 C14orf37Q86TY3 774 aa15.92■□□□□ 0.14
SMCO4P1-201ENST00000592909 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
SMCO4P1-201ENST00000592909 CROCC2H7BZ55 1655 aa15.92■□□□□ 0.14
SMCO4P1-201ENST00000592909 CDK12Q9NYV4 1490 aaPredicted RBP15.91■□□□□ 0.14
SMCO4P1-201ENST00000592909 AHDC1Q5TGY3 1603 aaPredicted RBP15.91■□□□□ 0.14
SMCO4P1-201ENST00000592909 PTPN23Q9H3S7 1636 aa15.91■□□□□ 0.14
SMCO4P1-201ENST00000592909 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
SMCO4P1-201ENST00000592909 CHD2O14647 1828 aaKnown RBP15.9■□□□□ 0.14
SMCO4P1-201ENST00000592909 ADAMTS13Q76LX8 1427 aa15.88■□□□□ 0.13
SMCO4P1-201ENST00000592909 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
SMCO4P1-201ENST00000592909 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
SMCO4P1-201ENST00000592909 NUTM2BA6NNL0 878 aaPredicted RBP15.86■□□□□ 0.13
SMCO4P1-201ENST00000592909 NUTM2EB1AL46 878 aaPredicted RBP15.86■□□□□ 0.13
SMCO4P1-201ENST00000592909 NUTM2AQ8IVF1 878 aaPredicted RBP15.86■□□□□ 0.13
SMCO4P1-201ENST00000592909 AFF2P51816 1311 aa15.86■□□□□ 0.13
SMCO4P1-201ENST00000592909 LOC105371045A0A1W2PR82 267 aa15.85■□□□□ 0.13
SMCO4P1-201ENST00000592909 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
SMCO4P1-201ENST00000592909 ADGRL2O95490 1459 aa15.84■□□□□ 0.13
SMCO4P1-201ENST00000592909 TMEM131LA2VDJ0 1609 aa15.84■□□□□ 0.13
SMCO4P1-201ENST00000592909 CHGAP10645 457 aaKnown RBP15.84■□□□□ 0.13
SMCO4P1-201ENST00000592909 APLP2Q06481 763 aa15.84■□□□□ 0.13
SMCO4P1-201ENST00000592909 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
SMCO4P1-201ENST00000592909 ANKRD50Q9ULJ7 1429 aa15.84■□□□□ 0.13
SMCO4P1-201ENST00000592909 DIP2AQ14689 1571 aa15.83■□□□□ 0.13
SMCO4P1-201ENST00000592909 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.83■□□□□ 0.13
SMCO4P1-201ENST00000592909 RBM6P78332 1123 aaKnown RBP15.82■□□□□ 0.12
SMCO4P1-201ENST00000592909 NUTM2DQ5VT03 806 aaPredicted RBP15.82■□□□□ 0.12
SMCO4P1-201ENST00000592909 LRRC59Q96AG4 307 aaKnown RBP15.82■□□□□ 0.12
SMCO4P1-201ENST00000592909 DCCP43146 1447 aa15.82■□□□□ 0.12
SMCO4P1-201ENST00000592909 QTRT2Q9H974 415 aaKnown RBP15.81■□□□□ 0.12
SMCO4P1-201ENST00000592909 PTPRUQ92729 1446 aa15.8■□□□□ 0.12
SMCO4P1-201ENST00000592909 RGS12O14924 1447 aa15.78■□□□□ 0.12
SMCO4P1-201ENST00000592909 C8orf37Q96NL8 207 aa15.78■□□□□ 0.12
SMCO4P1-201ENST00000592909 GCC2Q8IWJ2 1684 aa15.78■□□□□ 0.12
SMCO4P1-201ENST00000592909 ASXL1Q8IXJ9 1541 aa15.78■□□□□ 0.12
SMCO4P1-201ENST00000592909 MST1RQ04912 1400 aa15.77■□□□□ 0.12
SMCO4P1-201ENST00000592909 TRPM2O94759 1503 aa15.77■□□□□ 0.11
SMCO4P1-201ENST00000592909 MYO5BQ9ULV0 1848 aa15.77■□□□□ 0.11
SMCO4P1-201ENST00000592909 PNPLA6Q8IY17 1366 aa15.75■□□□□ 0.11
SMCO4P1-201ENST00000592909 NGLY1Q96IV0 654 aa15.75■□□□□ 0.11
SMCO4P1-201ENST00000592909 FAM50AQ14320 339 aaKnown RBP15.74■□□□□ 0.11
SMCO4P1-201ENST00000592909 DDX17Q92841 729 aaKnown RBP15.72■□□□□ 0.11
SMCO4P1-201ENST00000592909 ATAD2Q6PL18 1390 aa15.72■□□□□ 0.11
SMCO4P1-201ENST00000592909 FOXD1Q16676 465 aa15.71■□□□□ 0.11
SMCO4P1-201ENST00000592909 NHSL1Q5SYE7 1610 aa15.71■□□□□ 0.11
SMCO4P1-201ENST00000592909 ADAMTS2O95450 1211 aa15.7■□□□□ 0.1
SMCO4P1-201ENST00000592909 METP08581 1390 aa15.7■□□□□ 0.1
SMCO4P1-201ENST00000592909 UNC13BO14795 1591 aa15.7■□□□□ 0.1
SMCO4P1-201ENST00000592909 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
SMCO4P1-201ENST00000592909 ADGRL3Q9HAR2 1447 aa15.69■□□□□ 0.1
SMCO4P1-201ENST00000592909 XRN1Q8IZH2 1706 aaKnown RBP15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 E9PCH4 1651 aa15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 SETBP1Q9Y6X0 1596 aa15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 ZRANB1Q9UGI0 708 aa15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 USP21Q9UK80 565 aa15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
SMCO4P1-201ENST00000592909 SOS2Q07890 1332 aaPredicted RBP15.67■□□□□ 0.1
SMCO4P1-201ENST00000592909 NUP155O75694 1391 aa15.66■□□□□ 0.1
SMCO4P1-201ENST00000592909 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
SMCO4P1-201ENST00000592909 C1orf167Q5SNV9 1468 aa15.65■□□□□ 0.1
SMCO4P1-201ENST00000592909 NRXN3Q9Y4C0 1643 aa15.65■□□□□ 0.1
SMCO4P1-201ENST00000592909 CCDC125Q86Z20 511 aa15.65■□□□□ 0.1
SMCO4P1-201ENST00000592909 PTCH1Q13635 1447 aa15.64■□□□□ 0.09
SMCO4P1-201ENST00000592909 ZNF326Q5BKZ1 582 aaKnown RBP15.64■□□□□ 0.09
SMCO4P1-201ENST00000592909 IQGAP3Q86VI3 1631 aa15.64■□□□□ 0.09
SMCO4P1-201ENST00000592909 ATRNO75882 1429 aa15.62■□□□□ 0.09
SMCO4P1-201ENST00000592909 ORAI2Q96SN7 254 aa15.62■□□□□ 0.09
SMCO4P1-201ENST00000592909 LAMC1P11047 1609 aa15.6■□□□□ 0.09
SMCO4P1-201ENST00000592909 BCL9LQ86UU0 1499 aa15.57■□□□□ 0.08
SMCO4P1-201ENST00000592909 GJD4Q96KN9 370 aaPredicted RBP15.56■□□□□ 0.08
SMCO4P1-201ENST00000592909 ROBO2Q9HCK4 1378 aa15.56■□□□□ 0.08
SMCO4P1-201ENST00000592909 NALCNQ8IZF0 1738 aa15.56■□□□□ 0.08
SMCO4P1-201ENST00000592909 MYOM2P54296 1465 aa15.55■□□□□ 0.08
SMCO4P1-201ENST00000592909 NEXMIFQ5QGS0 1516 aa15.54■□□□□ 0.08
SMCO4P1-201ENST00000592909 PRAG1Q86YV5 1406 aa15.54■□□□□ 0.08
SMCO4P1-201ENST00000592909 VGFO15240 615 aaPredicted RBP15.54■□□□□ 0.08
SMCO4P1-201ENST00000592909 NPHP3Q7Z494 1330 aa15.53■□□□□ 0.08
SMCO4P1-201ENST00000592909 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms