RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 TIAM1Q13009 1591 aa15.84■□□□□ 0.13
DNMT1-228ENST00000592705 GSE1Q14687 1217 aa15.84■□□□□ 0.13
DNMT1-228ENST00000592705 HMMRO75330 724 aa15.84■□□□□ 0.13
DNMT1-228ENST00000592705 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
DNMT1-228ENST00000592705 ZNF644Q9H582 1327 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-228ENST00000592705 SYAP1Q96A49 352 aaPredicted RBP15.83■□□□□ 0.12
DNMT1-228ENST00000592705 RRP7AQ9Y3A4 280 aaKnown RBP15.83■□□□□ 0.12
DNMT1-228ENST00000592705 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
DNMT1-228ENST00000592705 ANKRD50Q9ULJ7 1429 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 ZKSCAN2Q63HK3 967 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 TAOK2Q9UL54 1235 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 ESCO1Q5FWF5 840 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 STAC3Q96MF2 364 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
DNMT1-228ENST00000592705 DDX11L8A8MPP1 907 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 NLRP2Q9NX02 1062 aa15.82■□□□□ 0.12
DNMT1-228ENST00000592705 APAF1O14727 1248 aa15.81■□□□□ 0.12
DNMT1-228ENST00000592705 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
DNMT1-228ENST00000592705 EHBP1L1Q8N3D4 1523 aa15.81■□□□□ 0.12
DNMT1-228ENST00000592705 ARHGAP5Q13017 1502 aa15.8■□□□□ 0.12
DNMT1-228ENST00000592705 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
DNMT1-228ENST00000592705 SLC4A3P48751 1232 aa15.8■□□□□ 0.12
DNMT1-228ENST00000592705 COG6Q9Y2V7 657 aa15.79■□□□□ 0.12
DNMT1-228ENST00000592705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.79■□□□□ 0.129e-8■□□□□ 9.9
DNMT1-228ENST00000592705 PPP1R1BQ9UD71 204 aaPredicted RBP15.78■□□□□ 0.12
DNMT1-228ENST00000592705 HMGXB3Q12766 1538 aa15.78■□□□□ 0.12
DNMT1-228ENST00000592705 KIAA2012Q0VF49 1180 aa15.78■□□□□ 0.12
DNMT1-228ENST00000592705 DRC7Q8IY82 874 aa15.77■□□□□ 0.11
DNMT1-228ENST00000592705 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
DNMT1-228ENST00000592705 TOPBP1Q92547 1522 aa15.76■□□□□ 0.11
DNMT1-228ENST00000592705 ST18O60284 1047 aa15.76■□□□□ 0.11
DNMT1-228ENST00000592705 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
DNMT1-228ENST00000592705 AAMPQ13685 434 aa15.75■□□□□ 0.11
DNMT1-228ENST00000592705 WDR97A6NE52 1622 aa15.75■□□□□ 0.11
DNMT1-228ENST00000592705 NLRP6P59044 892 aa15.74■□□□□ 0.11
DNMT1-228ENST00000592705 STRN4Q9NRL3 753 aa15.74■□□□□ 0.11
DNMT1-228ENST00000592705 SCAPERQ9BY12 1400 aa15.74■□□□□ 0.11
DNMT1-228ENST00000592705 DDX19BQ9UMR2 479 aa15.74■□□□□ 0.11
DNMT1-228ENST00000592705 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
DNMT1-228ENST00000592705 SKOR2Q2VWA4 1001 aaPredicted RBP15.74■□□□□ 0.11
DNMT1-228ENST00000592705 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
DNMT1-228ENST00000592705 TRIM6-TRIM34B2RNG4 842 aa15.73■□□□□ 0.11
DNMT1-228ENST00000592705 RUNDC1Q96C34 613 aa15.73■□□□□ 0.11
DNMT1-228ENST00000592705 FOXD4L1Q9NU39 408 aa15.72■□□□□ 0.11
DNMT1-228ENST00000592705 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
DNMT1-228ENST00000592705 CLSTN1O94985 981 aa15.72■□□□□ 0.11
DNMT1-228ENST00000592705 GPATCH3Q96I76 525 aa15.72■□□□□ 0.11
DNMT1-228ENST00000592705 ANKRD45Q5TZF3 282 aa15.71■□□□□ 0.11
DNMT1-228ENST00000592705 CSPP1Q1MSJ5 1256 aa15.71■□□□□ 0.11
DNMT1-228ENST00000592705 SLC4A10Q6U841 1118 aa15.71■□□□□ 0.11
DNMT1-228ENST00000592705 DZIP1LQ8IYY4 767 aaKnown RBP15.71■□□□□ 0.11
DNMT1-228ENST00000592705 PLEKHH2Q8IVE3 1493 aa15.71■□□□□ 0.11
DNMT1-228ENST00000592705 CD109Q6YHK3 1445 aa15.71■□□□□ 0.1
DNMT1-228ENST00000592705 RSPH6AQ9H0K4 717 aa15.71■□□□□ 0.1
DNMT1-228ENST00000592705 KIAA1107Q9UPP5 1409 aa15.7■□□□□ 0.1
DNMT1-228ENST00000592705 ABTB2Q8N961 1025 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 NEXNQ0ZGT2 675 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 NBPF8Q3BBV2 869 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 SLC26A8Q96RN1 970 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 PHF14O94880 888 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 SMG6Q86US8 1419 aaKnown RBP15.69■□□□□ 0.1
DNMT1-228ENST00000592705 PRDM11Q9NQV5 511 aa15.69■□□□□ 0.1
DNMT1-228ENST00000592705 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
DNMT1-228ENST00000592705 NUTM2GQ5VZR2 741 aa15.68■□□□□ 0.1
DNMT1-228ENST00000592705 ADAMTS8Q9UP79 889 aa15.68■□□□□ 0.1
DNMT1-228ENST00000592705 TOM1O60784 492 aa15.68■□□□□ 0.1
DNMT1-228ENST00000592705 HECW1Q76N89 1606 aa15.67■□□□□ 0.1
DNMT1-228ENST00000592705 SUPT6HQ7KZ85 1726 aaKnown RBP15.67■□□□□ 0.1
DNMT1-228ENST00000592705 NOL10Q9BSC4 688 aaKnown RBP15.67■□□□□ 0.1
DNMT1-228ENST00000592705 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
DNMT1-228ENST00000592705 CHMP5Q9NZZ3 219 aa15.67■□□□□ 0.1
DNMT1-228ENST00000592705 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
DNMT1-228ENST00000592705 UBAP1LF5GYI3 381 aa15.66■□□□□ 0.1
DNMT1-228ENST00000592705 MAP3K1Q13233 1512 aa15.66■□□□□ 0.1
DNMT1-228ENST00000592705 CWC22Q9HCG8 908 aaKnown RBP15.65■□□□□ 0.1
DNMT1-228ENST00000592705 PNISRQ8TF01 805 aaKnown RBP15.65■□□□□ 0.1
DNMT1-228ENST00000592705 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
DNMT1-228ENST00000592705 DDX49Q9Y6V7 483 aaKnown RBP15.65■□□□□ 0.1
DNMT1-228ENST00000592705 RBM33Q96EV2 1170 aaKnown RBP15.65■□□□□ 0.1
DNMT1-228ENST00000592705 ELL2O00472 640 aaPredicted RBP15.64■□□□□ 0.09
DNMT1-228ENST00000592705 TOM1L2Q6ZVM7 507 aa15.64■□□□□ 0.09
DNMT1-228ENST00000592705 CDCA7LQ96GN5 454 aa15.64■□□□□ 0.09
DNMT1-228ENST00000592705 AKNAQ7Z591 1439 aa15.64■□□□□ 0.09
DNMT1-228ENST00000592705 KIF16BQ96L93 1317 aa15.64■□□□□ 0.09
DNMT1-228ENST00000592705 NAIPQ13075 1403 aa15.64■□□□□ 0.09
DNMT1-228ENST00000592705 RIPK4P57078 832 aa15.64■□□□□ 0.09
DNMT1-228ENST00000592705 NFKBIBQ15653 356 aa15.63■□□□□ 0.09
DNMT1-228ENST00000592705 API5Q9BZZ5 524 aaKnown RBP15.63■□□□□ 0.09
DNMT1-228ENST00000592705 PPP2R1AP30153 589 aa15.63■□□□□ 0.09
DNMT1-228ENST00000592705 GNL2Q13823 731 aaKnown RBP15.63■□□□□ 0.09
DNMT1-228ENST00000592705 CTDP1Q9Y5B0 961 aaPredicted RBP15.63■□□□□ 0.09
DNMT1-228ENST00000592705 FBXW7Q969H0 707 aa15.63■□□□□ 0.09
DNMT1-228ENST00000592705 DAPK1P53355 1430 aa15.63■□□□□ 0.09
DNMT1-228ENST00000592705 NOL8Q76FK4 1167 aaKnown RBP15.62■□□□□ 0.09
DNMT1-228ENST00000592705 NGLY1Q96IV0 654 aa15.62■□□□□ 0.09
DNMT1-228ENST00000592705 DDX58O95786 925 aaKnown RBP15.61■□□□□ 0.09
DNMT1-228ENST00000592705 C9orf84Q5VXU9 1444 aa15.61■□□□□ 0.09
DNMT1-228ENST00000592705 ROCK1Q13464 1354 aa15.61■□□□□ 0.09
DNMT1-228ENST00000592705 REC8O95072 547 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms