RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 ANKLE2Q86XL3 938 aa25.79■■□□□ 1.72
RDH13-221ENST00000592573 SLIT1O75093 1534 aa25.78■■□□□ 1.72
RDH13-221ENST00000592573 ZFYVE9O95405 1425 aa25.78■■□□□ 1.72
RDH13-221ENST00000592573 PPP1R15AO75807 674 aaPredicted RBP25.77■■□□□ 1.72
RDH13-221ENST00000592573 EID1Q9Y6B2 187 aa25.77■■□□□ 1.72
RDH13-221ENST00000592573 KDM2AQ9Y2K7 1162 aa25.75■■□□□ 1.71
RDH13-221ENST00000592573 NEXMIFQ5QGS0 1516 aa25.74■■□□□ 1.71
RDH13-221ENST00000592573 SCAF11Q99590 1463 aaKnown RBP25.74■■□□□ 1.71
RDH13-221ENST00000592573 DCAF11Q8TEB1 546 aa25.72■■□□□ 1.71
RDH13-221ENST00000592573 BCANQ96GW7 911 aa25.72■■□□□ 1.71
RDH13-221ENST00000592573 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
RDH13-221ENST00000592573 L3MBTL2Q969R5 705 aa25.71■■□□□ 1.71
RDH13-221ENST00000592573 STRCQ7RTU9 1775 aa25.71■■□□□ 1.71
RDH13-221ENST00000592573 RPGRIP1LQ68CZ1 1315 aa25.7■■□□□ 1.71
RDH13-221ENST00000592573 ADGRF5Q8IZF2 1346 aa25.7■■□□□ 1.71
RDH13-221ENST00000592573 NEURL4Q96JN8 1562 aa25.7■■□□□ 1.7
RDH13-221ENST00000592573 CLSPNQ9HAW4 1339 aa25.69■■□□□ 1.7
RDH13-221ENST00000592573 HDGFP51858 240 aaKnown RBP25.68■■□□□ 1.7
RDH13-221ENST00000592573 NPHP4O75161 1426 aaPredicted RBP25.67■■□□□ 1.7
RDH13-221ENST00000592573 TONSLQ96HA7 1378 aa25.66■■□□□ 1.7
RDH13-221ENST00000592573 VGFO15240 615 aaPredicted RBP25.66■■□□□ 1.7
RDH13-221ENST00000592573 SLC26A8Q96RN1 970 aa25.66■■□□□ 1.7
RDH13-221ENST00000592573 POLR1AO95602 1720 aaPredicted RBP25.65■■□□□ 1.7
RDH13-221ENST00000592573 PPLO60437 1756 aa25.65■■□□□ 1.7
RDH13-221ENST00000592573 PLEKHG1Q9ULL1 1385 aa25.63■■□□□ 1.69
RDH13-221ENST00000592573 IFT172Q9UG01 1749 aa25.62■■□□□ 1.69
RDH13-221ENST00000592573 MED14O60244 1454 aa25.61■■□□□ 1.69
RDH13-221ENST00000592573 IQGAP1P46940 1657 aa25.59■■□□□ 1.69
RDH13-221ENST00000592573 MYOM2P54296 1465 aa25.58■■□□□ 1.68
RDH13-221ENST00000592573 ADAMTS13Q76LX8 1427 aa25.56■■□□□ 1.68
RDH13-221ENST00000592573 DMRT2Q9Y5R5 561 aa25.55■■□□□ 1.68
RDH13-221ENST00000592573 NRXN3Q9Y4C0 1643 aa25.55■■□□□ 1.68
RDH13-221ENST00000592573 CFAP70Q5T0N1 1121 aa25.54■■□□□ 1.68
RDH13-221ENST00000592573 PIK3C2GO75747 1445 aa25.54■■□□□ 1.68
RDH13-221ENST00000592573 NRXN1Q9ULB1 1477 aa25.53■■□□□ 1.68
RDH13-221ENST00000592573 SETBP1Q9Y6X0 1596 aa25.53■■□□□ 1.68
RDH13-221ENST00000592573 NBPF8Q3BBV2 869 aa25.52■■□□□ 1.68
RDH13-221ENST00000592573 PRAG1Q86YV5 1406 aa25.51■■□□□ 1.67
RDH13-221ENST00000592573 METP08581 1390 aa25.51■■□□□ 1.67
RDH13-221ENST00000592573 TMEM132EQ6IEE7 984 aa25.5■■□□□ 1.67
RDH13-221ENST00000592573 ALKQ9UM73 1620 aa25.49■■□□□ 1.67
RDH13-221ENST00000592573 ZNF335Q9H4Z2 1342 aaPredicted RBP25.49■■□□□ 1.67
RDH13-221ENST00000592573 TBX22Q9Y458 520 aa25.49■■□□□ 1.67
RDH13-221ENST00000592573 C14orf93Q9H972 538 aaKnown RBP25.47■■□□□ 1.67
RDH13-221ENST00000592573 STAC3Q96MF2 364 aa25.47■■□□□ 1.67
RDH13-221ENST00000592573 NBPF1Q3BBV0 1214 aa25.45■■□□□ 1.66
RDH13-221ENST00000592573 PTPRUQ92729 1446 aa25.44■■□□□ 1.66
RDH13-221ENST00000592573 STK26Q9P289 416 aa25.43■■□□□ 1.66
RDH13-221ENST00000592573 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
RDH13-221ENST00000592573 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
RDH13-221ENST00000592573 TIMELESSQ9UNS1 1208 aa25.42■■□□□ 1.66
RDH13-221ENST00000592573 SETD1AO15047 1707 aaKnown RBP25.42■■□□□ 1.66
RDH13-221ENST00000592573 AMOTL2Q9Y2J4 779 aa25.4■■□□□ 1.66
RDH13-221ENST00000592573 RBM33Q96EV2 1170 aaKnown RBP25.39■■□□□ 1.65
RDH13-221ENST00000592573 KCNA6P17658 529 aa25.38■■□□□ 1.65
RDH13-221ENST00000592573 STRCP1A6NGW2 1772 aa25.35■■□□□ 1.65
RDH13-221ENST00000592573 ADGRB1O14514 1584 aa25.35■■□□□ 1.65
RDH13-221ENST00000592573 LAMC1P11047 1609 aa25.34■■□□□ 1.65
RDH13-221ENST00000592573 ROCK2O75116 1388 aaKnown RBP25.34■■□□□ 1.65
RDH13-221ENST00000592573 PIK3R4Q99570 1358 aa25.34■■□□□ 1.65
RDH13-221ENST00000592573 TRPM1Q7Z4N2 1603 aa25.33■■□□□ 1.65
RDH13-221ENST00000592573 YTHDC2Q9H6S0 1430 aaKnown RBP25.33■■□□□ 1.65
RDH13-221ENST00000592573 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
RDH13-221ENST00000592573 LRPPRCP42704 1394 aaKnown RBP25.31■■□□□ 1.64
RDH13-221ENST00000592573 CHD2O14647 1828 aaKnown RBP25.3■■□□□ 1.64
RDH13-221ENST00000592573 ROBO2Q9HCK4 1378 aa25.3■■□□□ 1.64
RDH13-221ENST00000592573 NWD1Q149M9 1564 aa25.3■■□□□ 1.64
RDH13-221ENST00000592573 RALGAPBQ86X10 1494 aa25.29■■□□□ 1.64
RDH13-221ENST00000592573 PROSER2Q86WR7 435 aaPredicted RBP25.29■■□□□ 1.64
RDH13-221ENST00000592573 LTBP4Q8N2S1 1624 aa25.29■■□□□ 1.64
RDH13-221ENST00000592573 XRN1Q8IZH2 1706 aaKnown RBP25.28■■□□□ 1.64
RDH13-221ENST00000592573 KIAA1210Q9ULL0 1709 aa25.28■■□□□ 1.64
RDH13-221ENST00000592573 WAPLQ7Z5K2 1190 aa25.28■■□□□ 1.64
RDH13-221ENST00000592573 SAFB2Q14151 953 aaKnown RBP eCLIP25.27■■□□□ 1.64
RDH13-221ENST00000592573 CARD11Q9BXL7 1154 aa25.27■■□□□ 1.64
RDH13-221ENST00000592573 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
RDH13-221ENST00000592573 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
RDH13-221ENST00000592573 LRRC7Q96NW7 1537 aa25.24■■□□□ 1.63
RDH13-221ENST00000592573 NKTRP30414 1462 aaKnown RBP25.23■■□□□ 1.63
RDH13-221ENST00000592573 TMEM94Q12767 1356 aa25.23■■□□□ 1.63
RDH13-221ENST00000592573 PRAM1Q96QH2 718 aa25.23■■□□□ 1.63
RDH13-221ENST00000592573 GPRASP1Q5JY77 1395 aa25.22■■□□□ 1.63
RDH13-221ENST00000592573 CPS1P31327 1500 aa25.22■■□□□ 1.63
RDH13-221ENST00000592573 C14orf37Q86TY3 774 aa25.21■■□□□ 1.63
RDH13-221ENST00000592573 TECPR2O15040 1411 aa25.21■■□□□ 1.63
RDH13-221ENST00000592573 PTCH1Q13635 1447 aa25.21■■□□□ 1.63
RDH13-221ENST00000592573 POGKQ9P215 609 aa25.2■■□□□ 1.62
RDH13-221ENST00000592573 KNDC1Q76NI1 1749 aa25.17■■□□□ 1.62
RDH13-221ENST00000592573 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
RDH13-221ENST00000592573 DLC1Q96QB1 1528 aa25.15■■□□□ 1.62
RDH13-221ENST00000592573 HIRIP3Q9BW71 556 aaPredicted RBP25.15■■□□□ 1.62
RDH13-221ENST00000592573 MINK1Q8N4C8 1332 aaPredicted RBP25.14■■□□□ 1.61
RDH13-221ENST00000592573 FAM135BQ49AJ0 1406 aa25.14■■□□□ 1.61
RDH13-221ENST00000592573 ARHGEF28Q8N1W1 1705 aaKnown RBP25.13■■□□□ 1.61
RDH13-221ENST00000592573 SIRT1Q96EB6 747 aa25.13■■□□□ 1.61
RDH13-221ENST00000592573 USP47Q96K76 1375 aa25.11■■□□□ 1.61
RDH13-221ENST00000592573 CENPJQ9HC77 1338 aaPredicted RBP25.11■■□□□ 1.61
RDH13-221ENST00000592573 XIRP1Q702N8 1843 aaKnown RBP25.11■■□□□ 1.61
RDH13-221ENST00000592573 ZEB1P37275 1124 aaPredicted RBP25.1■■□□□ 1.61
RDH13-221ENST00000592573 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms