RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 VIRMAQ69YN4 1812 aaKnown RBP23.38■■□□□ 1.33
SPC24-206ENST00000592540 RGS3P49796 1198 aa23.38■■□□□ 1.33
SPC24-206ENST00000592540 SLFN5Q08AF3 891 aa23.38■■□□□ 1.33
SPC24-206ENST00000592540 ATP10AO60312 1499 aa23.37■■□□□ 1.33
SPC24-206ENST00000592540 SYCP2Q9BX26 1530 aa23.37■■□□□ 1.33
SPC24-206ENST00000592540 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.37■■□□□ 1.33
SPC24-206ENST00000592540 AMER1Q5JTC6 1135 aaPredicted RBP23.36■■□□□ 1.33
SPC24-206ENST00000592540 FRAT2O75474 233 aaPredicted RBP23.35■■□□□ 1.33
SPC24-206ENST00000592540 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
SPC24-206ENST00000592540 TRMT2AQ8IZ69 625 aaKnown RBP23.34■■□□□ 1.33
SPC24-206ENST00000592540 SYNMO15061 1565 aa23.33■■□□□ 1.33
SPC24-206ENST00000592540 EIF3AQ14152 1382 aaKnown RBP23.33■■□□□ 1.33
SPC24-206ENST00000592540 PLXNC1O60486 1568 aa23.33■■□□□ 1.33
SPC24-206ENST00000592540 PIK3C2GO75747 1445 aa23.32■■□□□ 1.32
SPC24-206ENST00000592540 ASXL1Q8IXJ9 1541 aa23.31■■□□□ 1.32
SPC24-206ENST00000592540 NKTRP30414 1462 aaKnown RBP23.29■■□□□ 1.32
SPC24-206ENST00000592540 MADDQ8WXG6 1647 aa23.29■■□□□ 1.32
SPC24-206ENST00000592540 ARHGAP5Q13017 1502 aa23.28■■□□□ 1.32
SPC24-206ENST00000592540 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
SPC24-206ENST00000592540 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
SPC24-206ENST00000592540 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
SPC24-206ENST00000592540 MYOM1P52179 1685 aa23.26■■□□□ 1.31
SPC24-206ENST00000592540 TTC37Q6PGP7 1564 aa23.26■■□□□ 1.31
SPC24-206ENST00000592540 BCAR3O75815 825 aa23.26■■□□□ 1.31
SPC24-206ENST00000592540 CDCA8Q53HL2 280 aa23.26■■□□□ 1.31
SPC24-206ENST00000592540 DUOX2Q9NRD8 1548 aa23.25■■□□□ 1.31
SPC24-206ENST00000592540 USP19O94966 1318 aa23.24■■□□□ 1.31
SPC24-206ENST00000592540 NPC1L1Q9UHC9 1359 aa23.24■■□□□ 1.31
SPC24-206ENST00000592540 APAF1O14727 1248 aa23.24■■□□□ 1.31
SPC24-206ENST00000592540 IGHDP01880 384 aa23.23■■□□□ 1.31
SPC24-206ENST00000592540 ERCC6Q03468 1493 aa23.22■■□□□ 1.31
SPC24-206ENST00000592540 E9PSI1 815 aa23.21■■□□□ 1.31
SPC24-206ENST00000592540 SPHKAPQ2M3C7 1700 aa23.21■■□□□ 1.31
SPC24-206ENST00000592540 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
SPC24-206ENST00000592540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.2■■□□□ 1.3
SPC24-206ENST00000592540 CGNL1Q0VF96 1302 aa23.19■■□□□ 1.3
SPC24-206ENST00000592540 KDM5AP29375 1690 aaKnown RBP23.17■■□□□ 1.3
SPC24-206ENST00000592540 PDE3AQ14432 1141 aa23.17■■□□□ 1.3
SPC24-206ENST00000592540 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
SPC24-206ENST00000592540 MAPK8IP3Q9UPT6 1336 aa23.17■■□□□ 1.3
SPC24-206ENST00000592540 CEP152O94986 1710 aa23.16■■□□□ 1.3
SPC24-206ENST00000592540 FAM43AQ8N2R8 423 aa23.16■■□□□ 1.3
SPC24-206ENST00000592540 SEC24BO95487 1268 aa23.15■■□□□ 1.3
SPC24-206ENST00000592540 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
SPC24-206ENST00000592540 NINLQ9Y2I6 1382 aa23.14■■□□□ 1.3
SPC24-206ENST00000592540 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.3
SPC24-206ENST00000592540 BECN1Q14457 450 aa23.14■■□□□ 1.29
SPC24-206ENST00000592540 NGEFQ8N5V2 710 aa23.14■■□□□ 1.29
SPC24-206ENST00000592540 NLRP1Q9C000 1473 aa23.12■■□□□ 1.29
SPC24-206ENST00000592540 CENPJQ9HC77 1338 aaPredicted RBP23.11■■□□□ 1.29
SPC24-206ENST00000592540 TRPM2O94759 1503 aa23.11■■□□□ 1.29
SPC24-206ENST00000592540 POGKQ9P215 609 aa23.11■■□□□ 1.29
SPC24-206ENST00000592540 PANK1Q8TE04 598 aa23.1■■□□□ 1.29
SPC24-206ENST00000592540 STAC3Q96MF2 364 aa23.1■■□□□ 1.29
SPC24-206ENST00000592540 COG6Q9Y2V7 657 aa23.1■■□□□ 1.29
SPC24-206ENST00000592540 CANXP27824 592 aaKnown RBP23.08■■□□□ 1.29
SPC24-206ENST00000592540 CLTCL1P53675 1640 aa23.08■■□□□ 1.29
SPC24-206ENST00000592540 KIAA1210Q9ULL0 1709 aa23.08■■□□□ 1.29
SPC24-206ENST00000592540 SLKQ9H2G2 1235 aaPredicted RBP23.07■■□□□ 1.28
SPC24-206ENST00000592540 EIF5BO60841 1220 aaKnown RBP23.06■■□□□ 1.28
SPC24-206ENST00000592540 WWC1Q8IX03 1113 aa23.05■■□□□ 1.28
SPC24-206ENST00000592540 RSPH6AQ9H0K4 717 aa23.05■■□□□ 1.28
SPC24-206ENST00000592540 ANTXR1Q9H6X2 564 aa23.04■■□□□ 1.28
SPC24-206ENST00000592540 PTPRTO14522 1441 aa23.04■■□□□ 1.28
SPC24-206ENST00000592540 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
SPC24-206ENST00000592540 ERVK-7P63135 1459 aa23.02■■□□□ 1.28
SPC24-206ENST00000592540 PMFBP1Q8TBY8 1022 aa23.02■■□□□ 1.28
SPC24-206ENST00000592540 POLR3AO14802 1390 aaPredicted RBP23.01■■□□□ 1.27
SPC24-206ENST00000592540 ZMYM3Q14202 1370 aa23■■□□□ 1.27
SPC24-206ENST00000592540 AAMPQ13685 434 aa23■■□□□ 1.27
SPC24-206ENST00000592540 L1TD1Q5T7N2 865 aaKnown RBP22.99■■□□□ 1.27
SPC24-206ENST00000592540 UBE2Q2Q8WVN8 375 aa22.99■■□□□ 1.27
SPC24-206ENST00000592540 TBC1D32Q96NH3 1257 aa22.99■■□□□ 1.27
SPC24-206ENST00000592540 UPF2Q9HAU5 1272 aaKnown RBP22.99■■□□□ 1.27
SPC24-206ENST00000592540 SLC24A1O60721 1099 aa22.99■■□□□ 1.27
SPC24-206ENST00000592540 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
SPC24-206ENST00000592540 ABCC1P33527 1531 aa22.98■■□□□ 1.27
SPC24-206ENST00000592540 RARSP54136 660 aaKnown RBP22.98■■□□□ 1.27
SPC24-206ENST00000592540 SHROOM2Q13796 1616 aa22.98■■□□□ 1.27
SPC24-206ENST00000592540 PLCH2O75038 1416 aa22.98■■□□□ 1.27
SPC24-206ENST00000592540 PCDHB15Q9Y5E8 787 aa22.98■■□□□ 1.27
SPC24-206ENST00000592540 TRAPPC8Q9Y2L5 1435 aa22.97■■□□□ 1.27
SPC24-206ENST00000592540 TET3O43151 1660 aa22.96■■□□□ 1.27
SPC24-206ENST00000592540 TBC1D2Q9BYX2 928 aa22.96■■□□□ 1.27
SPC24-206ENST00000592540 PDZRN3Q9UPQ7 1066 aa22.96■■□□□ 1.27
SPC24-206ENST00000592540 DEPDC5O75140 1603 aa22.95■■□□□ 1.26
SPC24-206ENST00000592540 EFCAB2Q5VUJ9 269 aa22.95■■□□□ 1.26
SPC24-206ENST00000592540 ABCA6Q8N139 1617 aa22.95■■□□□ 1.26
SPC24-206ENST00000592540 RLBP1P12271 317 aa22.94■■□□□ 1.26
SPC24-206ENST00000592540 MAP3K4Q9Y6R4 1608 aa22.94■■□□□ 1.26
SPC24-206ENST00000592540 NEUROD2Q15784 382 aa22.93■■□□□ 1.26
SPC24-206ENST00000592540 CFAP70Q5T0N1 1121 aa22.93■■□□□ 1.26
SPC24-206ENST00000592540 TNNQ9UQP3 1299 aa22.93■■□□□ 1.26
SPC24-206ENST00000592540 RUNDC1Q96C34 613 aa22.92■■□□□ 1.26
SPC24-206ENST00000592540 RRAGDQ9NQL2 400 aaPredicted RBP22.92■■□□□ 1.26
SPC24-206ENST00000592540 NEURL4Q96JN8 1562 aa22.92■■□□□ 1.26
SPC24-206ENST00000592540 RRP7AQ9Y3A4 280 aaKnown RBP22.92■■□□□ 1.26
SPC24-206ENST00000592540 IQSEC2Q5JU85 1478 aa22.91■■□□□ 1.26
SPC24-206ENST00000592540 PHF23Q9BUL5 403 aaPredicted RBP22.91■■□□□ 1.26
SPC24-206ENST00000592540 RWDD1Q9H446 243 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms