RNA–Protein interactions for RNA: ENST00000592423.1

RDH13-220, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 2,811 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-220ENST00000592423 ADCY10Q96PN6 1610 aa16.4■□□□□ 0.22
RDH13-220ENST00000592423 MAGI2Q86UL8 1455 aa16.39■□□□□ 0.21
RDH13-220ENST00000592423 ZNF521Q96K83 1311 aa16.39■□□□□ 0.21
RDH13-220ENST00000592423 PLEKHH2Q8IVE3 1493 aa16.38■□□□□ 0.21
RDH13-220ENST00000592423 ABCC10Q5T3U5 1492 aa16.38■□□□□ 0.21
RDH13-220ENST00000592423 SHANK2Q9UPX8 1470 aa16.38■□□□□ 0.21
RDH13-220ENST00000592423 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
RDH13-220ENST00000592423 USP19O94966 1318 aa16.37■□□□□ 0.21
RDH13-220ENST00000592423 AMER1Q5JTC6 1135 aaPredicted RBP16.37■□□□□ 0.21
RDH13-220ENST00000592423 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
RDH13-220ENST00000592423 ATP10BO94823 1461 aa16.36■□□□□ 0.21
RDH13-220ENST00000592423 COG6Q9Y2V7 657 aa16.36■□□□□ 0.21
RDH13-220ENST00000592423 PRDM15P57071 1507 aaPredicted RBP16.35■□□□□ 0.21
RDH13-220ENST00000592423 SPRYD3Q8NCJ5 442 aa16.35■□□□□ 0.21
RDH13-220ENST00000592423 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.21
RDH13-220ENST00000592423 INSRP06213 1382 aa16.33■□□□□ 0.2
RDH13-220ENST00000592423 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
RDH13-220ENST00000592423 WDR7Q9Y4E6 1490 aa16.32■□□□□ 0.2
RDH13-220ENST00000592423 CARMIL2Q6F5E8 1435 aa16.32■□□□□ 0.2
RDH13-220ENST00000592423 MYO5CQ9NQX4 1742 aa16.31■□□□□ 0.2
RDH13-220ENST00000592423 TNNQ9UQP3 1299 aa16.3■□□□□ 0.2
RDH13-220ENST00000592423 FAM43AQ8N2R8 423 aa16.3■□□□□ 0.2
RDH13-220ENST00000592423 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
RDH13-220ENST00000592423 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
RDH13-220ENST00000592423 RRAGDQ9NQL2 400 aaPredicted RBP16.29■□□□□ 0.2
RDH13-220ENST00000592423 TRMT2AQ8IZ69 625 aaKnown RBP16.28■□□□□ 0.2
RDH13-220ENST00000592423 UBE2Q2Q8WVN8 375 aa16.28■□□□□ 0.2
RDH13-220ENST00000592423 BCL2L13Q9BXK5 485 aa16.28■□□□□ 0.2
RDH13-220ENST00000592423 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
RDH13-220ENST00000592423 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
RDH13-220ENST00000592423 SAMD9LQ8IVG5 1584 aa16.28■□□□□ 0.2
RDH13-220ENST00000592423 EIF3AQ14152 1382 aaKnown RBP16.28■□□□□ 0.2
RDH13-220ENST00000592423 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.2
RDH13-220ENST00000592423 ABCA8O94911 1581 aa16.27■□□□□ 0.2
RDH13-220ENST00000592423 CLUAP1Q96AJ1 413 aa16.27■□□□□ 0.2
RDH13-220ENST00000592423 TNNT2P45379 298 aaPredicted RBP16.26■□□□□ 0.19
RDH13-220ENST00000592423 BECN1Q14457 450 aa16.25■□□□□ 0.19
RDH13-220ENST00000592423 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
RDH13-220ENST00000592423 E9PSI1 815 aa16.25■□□□□ 0.19
RDH13-220ENST00000592423 ERCC6L2Q5T890 1561 aa16.25■□□□□ 0.19
RDH13-220ENST00000592423 CENPJQ9HC77 1338 aaPredicted RBP16.25■□□□□ 0.19
RDH13-220ENST00000592423 ARHGEF5Q12774 1597 aa16.24■□□□□ 0.19
RDH13-220ENST00000592423 CDC42BPBQ9Y5S2 1711 aa16.23■□□□□ 0.19
RDH13-220ENST00000592423 RSPH6AQ9H0K4 717 aa16.23■□□□□ 0.19
RDH13-220ENST00000592423 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
RDH13-220ENST00000592423 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
RDH13-220ENST00000592423 RLBP1P12271 317 aa16.22■□□□□ 0.19
RDH13-220ENST00000592423 LAMC1P11047 1609 aa16.22■□□□□ 0.19
RDH13-220ENST00000592423 TBC1D2Q9BYX2 928 aa16.22■□□□□ 0.19
RDH13-220ENST00000592423 ASXL1Q8IXJ9 1541 aa16.21■□□□□ 0.19
RDH13-220ENST00000592423 EIF2AK4Q9P2K8 1649 aaKnown RBP16.21■□□□□ 0.19
RDH13-220ENST00000592423 PANK2Q9BZ23 570 aa16.21■□□□□ 0.19
RDH13-220ENST00000592423 ANTXR1Q9H6X2 564 aa16.21■□□□□ 0.19
RDH13-220ENST00000592423 MAPK8IP3Q9UPT6 1336 aa16.2■□□□□ 0.18
RDH13-220ENST00000592423 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
RDH13-220ENST00000592423 PDZRN3Q9UPQ7 1066 aa16.2■□□□□ 0.18
RDH13-220ENST00000592423 NLRP1Q9C000 1473 aa16.19■□□□□ 0.18
RDH13-220ENST00000592423 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
RDH13-220ENST00000592423 PDE3AQ14432 1141 aa16.19■□□□□ 0.18
RDH13-220ENST00000592423 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
RDH13-220ENST00000592423 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
RDH13-220ENST00000592423 ARHGAP5Q13017 1502 aa16.19■□□□□ 0.18
RDH13-220ENST00000592423 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
RDH13-220ENST00000592423 XRCC6P12956 609 aaKnown RBP eCLIP16.17■□□□□ 0.18
RDH13-220ENST00000592423 RSPH4AQ5TD94 716 aa16.17■□□□□ 0.18
RDH13-220ENST00000592423 UPF2Q9HAU5 1272 aaKnown RBP16.17■□□□□ 0.18
RDH13-220ENST00000592423 UNC13BO14795 1591 aa16.17■□□□□ 0.18
RDH13-220ENST00000592423 TBC1D32Q96NH3 1257 aa16.16■□□□□ 0.18
RDH13-220ENST00000592423 ABCC2Q92887 1545 aa16.16■□□□□ 0.18
RDH13-220ENST00000592423 RNF17Q9BXT8 1623 aaKnown RBP16.15■□□□□ 0.18
RDH13-220ENST00000592423 RARSP54136 660 aaKnown RBP16.15■□□□□ 0.18
RDH13-220ENST00000592423 CFAP70Q5T0N1 1121 aa16.15■□□□□ 0.18
RDH13-220ENST00000592423 L1TD1Q5T7N2 865 aaKnown RBP16.15■□□□□ 0.18
RDH13-220ENST00000592423 PREX2Q70Z35 1606 aa16.14■□□□□ 0.17
RDH13-220ENST00000592423 MFAP1P55081 439 aaKnown RBP16.14■□□□□ 0.17
RDH13-220ENST00000592423 IQGAP3Q86VI3 1631 aa16.14■□□□□ 0.17
RDH13-220ENST00000592423 SYNMO15061 1565 aa16.13■□□□□ 0.17
RDH13-220ENST00000592423 GOLGA6L3A6NEY3 463 aa16.13■□□□□ 0.17
RDH13-220ENST00000592423 NAP1L5Q96NT1 182 aaPredicted RBP16.13■□□□□ 0.17
RDH13-220ENST00000592423 SCAF11Q99590 1463 aaKnown RBP16.13■□□□□ 0.17
RDH13-220ENST00000592423 TTC37Q6PGP7 1564 aa16.12■□□□□ 0.17
RDH13-220ENST00000592423 MYOM1P52179 1685 aa16.12■□□□□ 0.17
RDH13-220ENST00000592423 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
RDH13-220ENST00000592423 IQGAP1P46940 1657 aa16.12■□□□□ 0.17
RDH13-220ENST00000592423 TCP11L2Q8N4U5 519 aa16.12■□□□□ 0.17
RDH13-220ENST00000592423 MCM4P33991 863 aa16.11■□□□□ 0.17
RDH13-220ENST00000592423 PMFBP1Q8TBY8 1022 aa16.11■□□□□ 0.17
RDH13-220ENST00000592423 MAST1Q9Y2H9 1570 aa16.08■□□□□ 0.17
RDH13-220ENST00000592423 MORC1Q86VD1 984 aa16.08■□□□□ 0.16
RDH13-220ENST00000592423 TRAK2O60296 914 aa16.07■□□□□ 0.16
RDH13-220ENST00000592423 C22orf23Q9BZE7 217 aa16.07■□□□□ 0.16
RDH13-220ENST00000592423 ATP10AO60312 1499 aa16.07■□□□□ 0.16
RDH13-220ENST00000592423 RWDD1Q9H446 243 aaPredicted RBP16.07■□□□□ 0.16
RDH13-220ENST00000592423 PNNQ9H307 717 aaKnown RBP16.06■□□□□ 0.16
RDH13-220ENST00000592423 NPC1L1Q9UHC9 1359 aa16.06■□□□□ 0.16
RDH13-220ENST00000592423 ADGRF5Q8IZF2 1346 aa16.06■□□□□ 0.16
RDH13-220ENST00000592423 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.06■□□□□ 0.16
RDH13-220ENST00000592423 AFAP1Q8N556 730 aa16.06■□□□□ 0.16
RDH13-220ENST00000592423 SLC12A5Q9H2X9 1139 aa16.06■□□□□ 0.16
RDH13-220ENST00000592423 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms