RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 EID1Q9Y6B2 187 aa27.66■■■□□ 2.02
TCF3-216ENST00000592395 HRCP23327 699 aa27.65■■■□□ 2.02
TCF3-216ENST00000592395 TXNDC2Q86VQ3 553 aa27.65■■■□□ 2.02
TCF3-216ENST00000592395 CHGAP10645 457 aaKnown RBP27.64■■■□□ 2.02
TCF3-216ENST00000592395 LTKP29376 864 aa27.64■■■□□ 2.02
TCF3-216ENST00000592395 KIF1BO60333 1816 aa27.62■■■□□ 2.01
TCF3-216ENST00000592395 ZFYVE9O95405 1425 aa27.6■■■□□ 2.01
TCF3-216ENST00000592395 RIMS2Q9UQ26 1411 aa27.58■■■□□ 2.01
TCF3-216ENST00000592395 HDGFP51858 240 aaKnown RBP27.57■■■□□ 2
TCF3-216ENST00000592395 LTBP4Q8N2S1 1624 aa27.56■■■□□ 2
TCF3-216ENST00000592395 ZNF335Q9H4Z2 1342 aaPredicted RBP27.53■■■□□ 2
TCF3-216ENST00000592395 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.53■■■□□ 2
TCF3-216ENST00000592395 CCDC144AA2RUR9 1427 aa27.51■■□□□ 1.99
TCF3-216ENST00000592395 TRIM26Q12899 539 aaPredicted RBP27.51■■□□□ 1.99
TCF3-216ENST00000592395 PPP1R15AO75807 674 aaPredicted RBP27.5■■□□□ 1.99
TCF3-216ENST00000592395 PLEKHG1Q9ULL1 1385 aa27.49■■□□□ 1.99
TCF3-216ENST00000592395 ZNF326Q5BKZ1 582 aaKnown RBP27.49■■□□□ 1.99
TCF3-216ENST00000592395 CERKQ8TCT0 537 aa27.49■■□□□ 1.99
TCF3-216ENST00000592395 CNKSR2Q8WXI2 1034 aa27.47■■□□□ 1.99
TCF3-216ENST00000592395 NEXMIFQ5QGS0 1516 aa27.46■■□□□ 1.99
TCF3-216ENST00000592395 CPS1P31327 1500 aa27.45■■□□□ 1.98
TCF3-216ENST00000592395 MAPK8IP2Q13387 824 aaPredicted RBP27.44■■□□□ 1.98
TCF3-216ENST00000592395 NUTM2DQ5VT03 806 aaPredicted RBP27.43■■□□□ 1.98
TCF3-216ENST00000592395 NPM3O75607 178 aaKnown RBP27.42■■□□□ 1.98
TCF3-216ENST00000592395 BCANQ96GW7 911 aa27.42■■□□□ 1.98
TCF3-216ENST00000592395 STRCP1A6NGW2 1772 aa27.42■■□□□ 1.98
TCF3-216ENST00000592395 IQSEC2Q5JU85 1478 aa27.41■■□□□ 1.98
TCF3-216ENST00000592395 SLC26A8Q96RN1 970 aa27.4■■□□□ 1.98
TCF3-216ENST00000592395 DIP2AQ14689 1571 aa27.39■■□□□ 1.98
TCF3-216ENST00000592395 ANKRD30BQ9BXX2 1392 aa27.39■■□□□ 1.98
TCF3-216ENST00000592395 PPLO60437 1756 aa27.39■■□□□ 1.98
TCF3-216ENST00000592395 SPATA31E1Q6ZUB1 1445 aa27.39■■□□□ 1.97
TCF3-216ENST00000592395 RPGRIP1LQ68CZ1 1315 aa27.39■■□□□ 1.97
TCF3-216ENST00000592395 SETBP1Q9Y6X0 1596 aa27.37■■□□□ 1.97
TCF3-216ENST00000592395 ADAMTS13Q76LX8 1427 aa27.36■■□□□ 1.97
TCF3-216ENST00000592395 NRXN3Q9Y4C0 1643 aa27.35■■□□□ 1.97
TCF3-216ENST00000592395 TBX22Q9Y458 520 aa27.34■■□□□ 1.97
TCF3-216ENST00000592395 IFT172Q9UG01 1749 aa27.33■■□□□ 1.97
TCF3-216ENST00000592395 NWD1Q149M9 1564 aa27.33■■□□□ 1.97
TCF3-216ENST00000592395 VGFO15240 615 aaPredicted RBP27.32■■□□□ 1.96
TCF3-216ENST00000592395 RGL3Q3MIN7 710 aa27.31■■□□□ 1.96
TCF3-216ENST00000592395 FBXO41Q8TF61 875 aa27.31■■□□□ 1.96
TCF3-216ENST00000592395 CHD2O14647 1828 aaKnown RBP27.31■■□□□ 1.96
TCF3-216ENST00000592395 KCNA6P17658 529 aa27.3■■□□□ 1.96
TCF3-216ENST00000592395 PIK3R4Q99570 1358 aa27.29■■□□□ 1.96
TCF3-216ENST00000592395 LRRC7Q96NW7 1537 aa27.29■■□□□ 1.96
TCF3-216ENST00000592395 NKTRP30414 1462 aaKnown RBP27.26■■□□□ 1.95
TCF3-216ENST00000592395 ILDR1Q86SU0 546 aaPredicted RBP27.23■■□□□ 1.95
TCF3-216ENST00000592395 SETD1AO15047 1707 aaKnown RBP27.22■■□□□ 1.95
TCF3-216ENST00000592395 XIRP1Q702N8 1843 aaKnown RBP27.22■■□□□ 1.95
TCF3-216ENST00000592395 ALKQ9UM73 1620 aa27.2■■□□□ 1.95
TCF3-216ENST00000592395 MYOM2P54296 1465 aa27.19■■□□□ 1.94
TCF3-216ENST00000592395 ADGRF5Q8IZF2 1346 aa27.18■■□□□ 1.94
TCF3-216ENST00000592395 METP08581 1390 aa27.18■■□□□ 1.94
TCF3-216ENST00000592395 XRN1Q8IZH2 1706 aaKnown RBP27.18■■□□□ 1.94
TCF3-216ENST00000592395 PTPRUQ92729 1446 aa27.17■■□□□ 1.94
TCF3-216ENST00000592395 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
TCF3-216ENST00000592395 PROSER2Q86WR7 435 aaPredicted RBP27.16■■□□□ 1.94
TCF3-216ENST00000592395 PIK3C2GO75747 1445 aa27.16■■□□□ 1.94
TCF3-216ENST00000592395 TMEM94Q12767 1356 aa27.15■■□□□ 1.94
TCF3-216ENST00000592395 NRXN1Q9ULB1 1477 aa27.14■■□□□ 1.94
TCF3-216ENST00000592395 UBAP1LF5GYI3 381 aa27.14■■□□□ 1.94
TCF3-216ENST00000592395 AMOTL2Q9Y2J4 779 aa27.14■■□□□ 1.94
TCF3-216ENST00000592395 TOM1O60784 492 aa27.1■■□□□ 1.93
TCF3-216ENST00000592395 LAMC1P11047 1609 aa27.09■■□□□ 1.93
TCF3-216ENST00000592395 NCOA3Q9Y6Q9 1424 aa27.09■■□□□ 1.93
TCF3-216ENST00000592395 STAC3Q96MF2 364 aa27.08■■□□□ 1.93
TCF3-216ENST00000592395 RBM33Q96EV2 1170 aaKnown RBP27.07■■□□□ 1.92
TCF3-216ENST00000592395 DCAF11Q8TEB1 546 aa27.06■■□□□ 1.92
TCF3-216ENST00000592395 PCGF6Q9BYE7 350 aa27.06■■□□□ 1.92
TCF3-216ENST00000592395 PRAG1Q86YV5 1406 aa27.05■■□□□ 1.92
TCF3-216ENST00000592395 MSH6P52701 1360 aa27.03■■□□□ 1.92
TCF3-216ENST00000592395 PTCH1Q13635 1447 aa27.03■■□□□ 1.92
TCF3-216ENST00000592395 ASXL1Q8IXJ9 1541 aa27.03■■□□□ 1.92
TCF3-216ENST00000592395 KDM2AQ9Y2K7 1162 aa27.03■■□□□ 1.92
TCF3-216ENST00000592395 C14orf93Q9H972 538 aaKnown RBP27.02■■□□□ 1.92
TCF3-216ENST00000592395 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
TCF3-216ENST00000592395 KNDC1Q76NI1 1749 aa26.99■■□□□ 1.91
TCF3-216ENST00000592395 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
TCF3-216ENST00000592395 CFAP70Q5T0N1 1121 aa26.98■■□□□ 1.91
TCF3-216ENST00000592395 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.98■■□□□ 1.91
TCF3-216ENST00000592395 LRPPRCP42704 1394 aaKnown RBP26.97■■□□□ 1.91
TCF3-216ENST00000592395 PIP4K2BP78356 416 aa26.97■■□□□ 1.91
TCF3-216ENST00000592395 TMEM132EQ6IEE7 984 aa26.96■■□□□ 1.91
TCF3-216ENST00000592395 TECPR2O15040 1411 aa26.96■■□□□ 1.91
TCF3-216ENST00000592395 ROBO2Q9HCK4 1378 aa26.96■■□□□ 1.91
TCF3-216ENST00000592395 NEUROD1Q13562 356 aa26.95■■□□□ 1.9
TCF3-216ENST00000592395 YTHDC2Q9H6S0 1430 aaKnown RBP26.95■■□□□ 1.9
TCF3-216ENST00000592395 NALCNQ8IZF0 1738 aa26.94■■□□□ 1.9
TCF3-216ENST00000592395 C19orf44Q9H6X5 657 aa26.94■■□□□ 1.9
TCF3-216ENST00000592395 ABCC11Q96J66 1382 aa26.94■■□□□ 1.9
TCF3-216ENST00000592395 DCCP43146 1447 aa26.92■■□□□ 1.9
TCF3-216ENST00000592395 ADGRL3Q9HAR2 1447 aa26.92■■□□□ 1.9
TCF3-216ENST00000592395 ADGRB1O14514 1584 aa26.92■■□□□ 1.9
TCF3-216ENST00000592395 STK26Q9P289 416 aa26.91■■□□□ 1.9
TCF3-216ENST00000592395 KIAA1210Q9ULL0 1709 aa26.9■■□□□ 1.9
TCF3-216ENST00000592395 CADPS2Q86UW7 1296 aa26.9■■□□□ 1.9
TCF3-216ENST00000592395 L3MBTL2Q969R5 705 aa26.9■■□□□ 1.9
TCF3-216ENST00000592395 ATF3P18847 181 aa26.88■■□□□ 1.89
TCF3-216ENST00000592395 FAM135BQ49AJ0 1406 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms