RNA–Protein interactions for RNA: ENST00000592361.2

MBD3-210, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-210ENST00000592361 SPHKAPQ2M3C7 1700 aa25.97■■□□□ 1.75
MBD3-210ENST00000592361 PPP1R15AO75807 674 aaPredicted RBP25.96■■□□□ 1.75
MBD3-210ENST00000592361 CHD2O14647 1828 aaKnown RBP25.95■■□□□ 1.74
MBD3-210ENST00000592361 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.74
MBD3-210ENST00000592361 NUP155O75694 1391 aa25.95■■□□□ 1.74
MBD3-210ENST00000592361 ZFYVE9O95405 1425 aa25.93■■□□□ 1.74
MBD3-210ENST00000592361 RIMS2Q9UQ26 1411 aa25.93■■□□□ 1.74
MBD3-210ENST00000592361 PLEKHG1Q9ULL1 1385 aa25.92■■□□□ 1.74
MBD3-210ENST00000592361 DIP2AQ14689 1571 aa25.91■■□□□ 1.74
MBD3-210ENST00000592361 KCNA6P17658 529 aa25.91■■□□□ 1.74
MBD3-210ENST00000592361 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
MBD3-210ENST00000592361 SLC26A8Q96RN1 970 aa25.89■■□□□ 1.74
MBD3-210ENST00000592361 RRBP1Q9P2E9 1410 aaKnown RBP25.88■■□□□ 1.73
MBD3-210ENST00000592361 CHGAP10645 457 aaKnown RBP25.88■■□□□ 1.73
MBD3-210ENST00000592361 PPARGC1BQ86YN6 1023 aaKnown RBP25.88■■□□□ 1.73
MBD3-210ENST00000592361 TMEM94Q12767 1356 aa25.87■■□□□ 1.73
MBD3-210ENST00000592361 ILDR2Q71H61 639 aa25.86■■□□□ 1.73
MBD3-210ENST00000592361 SOCS7O14512 581 aa25.85■■□□□ 1.73
MBD3-210ENST00000592361 PROSER2Q86WR7 435 aaPredicted RBP25.84■■□□□ 1.73
MBD3-210ENST00000592361 KIF1BO60333 1816 aa25.84■■□□□ 1.73
MBD3-210ENST00000592361 MSH6P52701 1360 aa25.82■■□□□ 1.72
MBD3-210ENST00000592361 ROBO1Q9Y6N7 1651 aa25.82■■□□□ 1.72
MBD3-210ENST00000592361 TRPM2O94759 1503 aa25.8■■□□□ 1.72
MBD3-210ENST00000592361 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
MBD3-210ENST00000592361 FAM135BQ49AJ0 1406 aa25.79■■□□□ 1.72
MBD3-210ENST00000592361 PIK3R4Q99570 1358 aa25.78■■□□□ 1.72
MBD3-210ENST00000592361 TBX22Q9Y458 520 aa25.77■■□□□ 1.72
MBD3-210ENST00000592361 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
MBD3-210ENST00000592361 NCOA3Q9Y6Q9 1424 aa25.74■■□□□ 1.71
MBD3-210ENST00000592361 NAIPQ13075 1403 aa25.73■■□□□ 1.71
MBD3-210ENST00000592361 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
MBD3-210ENST00000592361 CLTCL1P53675 1640 aa25.71■■□□□ 1.71
MBD3-210ENST00000592361 PHLPP1O60346 1717 aa25.71■■□□□ 1.71
MBD3-210ENST00000592361 HFM1A2PYH4 1435 aa25.71■■□□□ 1.71
MBD3-210ENST00000592361 SETBP1Q9Y6X0 1596 aa25.7■■□□□ 1.71
MBD3-210ENST00000592361 C14orf37Q86TY3 774 aa25.69■■□□□ 1.7
MBD3-210ENST00000592361 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
MBD3-210ENST00000592361 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
MBD3-210ENST00000592361 NUTM2DQ5VT03 806 aaPredicted RBP25.67■■□□□ 1.7
MBD3-210ENST00000592361 NRXN3Q9Y4C0 1643 aa25.66■■□□□ 1.7
MBD3-210ENST00000592361 XRN1Q8IZH2 1706 aaKnown RBP25.66■■□□□ 1.7
MBD3-210ENST00000592361 RBM33Q96EV2 1170 aaKnown RBP25.65■■□□□ 1.7
MBD3-210ENST00000592361 NEXMIFQ5QGS0 1516 aa25.63■■□□□ 1.69
MBD3-210ENST00000592361 TRIM52Q96A61 297 aa25.62■■□□□ 1.69
MBD3-210ENST00000592361 SLAIN2Q9P270 581 aa25.62■■□□□ 1.69
MBD3-210ENST00000592361 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
MBD3-210ENST00000592361 ATF3P18847 181 aa25.59■■□□□ 1.69
MBD3-210ENST00000592361 DCCP43146 1447 aa25.58■■□□□ 1.69
MBD3-210ENST00000592361 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.69
MBD3-210ENST00000592361 AMOTL2Q9Y2J4 779 aa25.57■■□□□ 1.68
MBD3-210ENST00000592361 PPLO60437 1756 aa25.56■■□□□ 1.68
MBD3-210ENST00000592361 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
MBD3-210ENST00000592361 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
MBD3-210ENST00000592361 AHDC1Q5TGY3 1603 aaPredicted RBP25.53■■□□□ 1.68
MBD3-210ENST00000592361 JCADQ9P266 1359 aa25.53■■□□□ 1.68
MBD3-210ENST00000592361 PTPRUQ92729 1446 aa25.52■■□□□ 1.68
MBD3-210ENST00000592361 ACIN1Q9UKV3 1341 aaKnown RBP25.51■■□□□ 1.67
MBD3-210ENST00000592361 SETD1AO15047 1707 aaKnown RBP25.5■■□□□ 1.67
MBD3-210ENST00000592361 VGFO15240 615 aaPredicted RBP25.5■■□□□ 1.67
MBD3-210ENST00000592361 SHPRHQ149N8 1683 aa25.5■■□□□ 1.67
MBD3-210ENST00000592361 RPGRIP1LQ68CZ1 1315 aa25.49■■□□□ 1.67
MBD3-210ENST00000592361 NALCNQ8IZF0 1738 aa25.49■■□□□ 1.67
MBD3-210ENST00000592361 CCDC144AA2RUR9 1427 aa25.45■■□□□ 1.66
MBD3-210ENST00000592361 ADGRL3Q9HAR2 1447 aa25.45■■□□□ 1.66
MBD3-210ENST00000592361 NHSL1Q5SYE7 1610 aa25.45■■□□□ 1.66
MBD3-210ENST00000592361 METP08581 1390 aa25.44■■□□□ 1.66
MBD3-210ENST00000592361 PTCH1Q13635 1447 aa25.43■■□□□ 1.66
MBD3-210ENST00000592361 IFT172Q9UG01 1749 aa25.42■■□□□ 1.66
MBD3-210ENST00000592361 ASXL1Q8IXJ9 1541 aa25.42■■□□□ 1.66
MBD3-210ENST00000592361 SPATA31A6Q5VVP1 1343 aa25.41■■□□□ 1.66
MBD3-210ENST00000592361 MST1RQ04912 1400 aa25.38■■□□□ 1.65
MBD3-210ENST00000592361 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
MBD3-210ENST00000592361 BRINP3Q76B58 766 aa25.36■■□□□ 1.65
MBD3-210ENST00000592361 MEX3CQ5U5Q3 659 aaKnown RBP25.34■■□□□ 1.65
MBD3-210ENST00000592361 RGS17Q9UGC6 210 aaPredicted RBP25.34■■□□□ 1.65
MBD3-210ENST00000592361 ANKRD30BQ9BXX2 1392 aa25.32■■□□□ 1.64
MBD3-210ENST00000592361 KNDC1Q76NI1 1749 aa25.32■■□□□ 1.64
MBD3-210ENST00000592361 MPHOSPH9Q99550 1183 aa25.31■■□□□ 1.64
MBD3-210ENST00000592361 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
MBD3-210ENST00000592361 LAMC1P11047 1609 aa25.29■■□□□ 1.64
MBD3-210ENST00000592361 LRP6O75581 1613 aa25.28■■□□□ 1.64
MBD3-210ENST00000592361 FOXD1Q16676 465 aa25.28■■□□□ 1.64
MBD3-210ENST00000592361 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
MBD3-210ENST00000592361 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
MBD3-210ENST00000592361 LRRC59Q96AG4 307 aaKnown RBP25.26■■□□□ 1.63
MBD3-210ENST00000592361 ROBO2Q9HCK4 1378 aa25.26■■□□□ 1.63
MBD3-210ENST00000592361 ZNF772Q68DY9 489 aaPredicted RBP25.25■■□□□ 1.63
MBD3-210ENST00000592361 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
MBD3-210ENST00000592361 POTEAQ6S8J7 498 aa25.24■■□□□ 1.63
MBD3-210ENST00000592361 RGL3Q3MIN7 710 aa25.22■■□□□ 1.63
MBD3-210ENST00000592361 TECPR2O15040 1411 aa25.2■■□□□ 1.63
MBD3-210ENST00000592361 PIK3C2GO75747 1445 aa25.2■■□□□ 1.63
MBD3-210ENST00000592361 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
MBD3-210ENST00000592361 NUTM2BA6NNL0 878 aaPredicted RBP25.17■■□□□ 1.62
MBD3-210ENST00000592361 NUTM2EB1AL46 878 aaPredicted RBP25.17■■□□□ 1.62
MBD3-210ENST00000592361 NUTM2AQ8IVF1 878 aaPredicted RBP25.17■■□□□ 1.62
MBD3-210ENST00000592361 MYOM2P54296 1465 aa25.16■■□□□ 1.62
MBD3-210ENST00000592361 LRPPRCP42704 1394 aaKnown RBP25.16■■□□□ 1.62
MBD3-210ENST00000592361 RAB3GAP2Q9H2M9 1393 aa25.16■■□□□ 1.62
MBD3-210ENST00000592361 PNPLA6Q8IY17 1366 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms