RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 TBX22Q9Y458 520 aa14.23□□□□□ -0.13
APOC1-207ENST00000592176 CHGAP10645 457 aaKnown RBP14.22□□□□□ -0.13
APOC1-207ENST00000592176 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.22□□□□□ -0.13
APOC1-207ENST00000592176 JCADQ9P266 1359 aa14.22□□□□□ -0.13
APOC1-207ENST00000592176 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
APOC1-207ENST00000592176 PLEKHG1Q9ULL1 1385 aa14.2□□□□□ -0.14
APOC1-207ENST00000592176 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
APOC1-207ENST00000592176 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
APOC1-207ENST00000592176 NKTRP30414 1462 aaKnown RBP14.19□□□□□ -0.14
APOC1-207ENST00000592176 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
APOC1-207ENST00000592176 CROCC2H7BZ55 1655 aa14.18□□□□□ -0.14
APOC1-207ENST00000592176 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
APOC1-207ENST00000592176 C19orf44Q9H6X5 657 aa14.18□□□□□ -0.14
APOC1-207ENST00000592176 ADGRB3O60242 1522 aa14.18□□□□□ -0.14
APOC1-207ENST00000592176 ANKRD50Q9ULJ7 1429 aa14.17□□□□□ -0.14
APOC1-207ENST00000592176 ATF3P18847 181 aa14.17□□□□□ -0.14
APOC1-207ENST00000592176 MEX3CQ5U5Q3 659 aaKnown RBP14.17□□□□□ -0.14
APOC1-207ENST00000592176 CADPS2Q86UW7 1296 aa14.17□□□□□ -0.14
APOC1-207ENST00000592176 ZFYVE9O95405 1425 aa14.16□□□□□ -0.14
APOC1-207ENST00000592176 NCOA3Q9Y6Q9 1424 aa14.16□□□□□ -0.14
APOC1-207ENST00000592176 RPRD2Q5VT52 1461 aaKnown RBP14.16□□□□□ -0.14
APOC1-207ENST00000592176 SPATA31A6Q5VVP1 1343 aa14.15□□□□□ -0.14
APOC1-207ENST00000592176 ADGRL2O95490 1459 aa14.15□□□□□ -0.14
APOC1-207ENST00000592176 ZNF772Q68DY9 489 aaPredicted RBP14.15□□□□□ -0.14
APOC1-207ENST00000592176 NWD1Q149M9 1564 aa14.14□□□□□ -0.15
APOC1-207ENST00000592176 AMOTL2Q9Y2J4 779 aa14.13□□□□□ -0.15
APOC1-207ENST00000592176 TRIM52Q96A61 297 aa14.12□□□□□ -0.15
APOC1-207ENST00000592176 PHLPP1O60346 1717 aa14.11□□□□□ -0.15
APOC1-207ENST00000592176 UPF1Q92900 1129 aaKnown RBP eCLIP14.11□□□□□ -0.15
APOC1-207ENST00000592176 PIK3R4Q99570 1358 aa14.1□□□□□ -0.15
APOC1-207ENST00000592176 NUTM2BA6NNL0 878 aaPredicted RBP14.1□□□□□ -0.15
APOC1-207ENST00000592176 NUTM2EB1AL46 878 aaPredicted RBP14.1□□□□□ -0.15
APOC1-207ENST00000592176 RXRBP28702 533 aa14.1□□□□□ -0.15
APOC1-207ENST00000592176 NUTM2AQ8IVF1 878 aaPredicted RBP14.1□□□□□ -0.15
APOC1-207ENST00000592176 ADAMTS13Q76LX8 1427 aa14.09□□□□□ -0.15
APOC1-207ENST00000592176 BRINP3Q76B58 766 aa14.09□□□□□ -0.15
APOC1-207ENST00000592176 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.15
APOC1-207ENST00000592176 TMEM131LA2VDJ0 1609 aa14.08□□□□□ -0.16
APOC1-207ENST00000592176 NUP155O75694 1391 aa14.07□□□□□ -0.16
APOC1-207ENST00000592176 LRP6O75581 1613 aa14.05□□□□□ -0.16
APOC1-207ENST00000592176 COL16A1Q07092 1604 aaPredicted RBP14.05□□□□□ -0.16
APOC1-207ENST00000592176 ITGAEP38570 1179 aa14.05□□□□□ -0.16
APOC1-207ENST00000592176 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
APOC1-207ENST00000592176 LRRC59Q96AG4 307 aaKnown RBP14.05□□□□□ -0.16
APOC1-207ENST00000592176 ROCK1Q13464 1354 aa14.04□□□□□ -0.16
APOC1-207ENST00000592176 PTPRUQ92729 1446 aa14.04□□□□□ -0.16
APOC1-207ENST00000592176 GCC2Q8IWJ2 1684 aa14.04□□□□□ -0.16
APOC1-207ENST00000592176 AFF2P51816 1311 aa14.02□□□□□ -0.17
APOC1-207ENST00000592176 MYO5BQ9ULV0 1848 aa14.01□□□□□ -0.17
APOC1-207ENST00000592176 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
APOC1-207ENST00000592176 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
APOC1-207ENST00000592176 DIP2AQ14689 1571 aa14.01□□□□□ -0.17
APOC1-207ENST00000592176 QTRT2Q9H974 415 aaKnown RBP14.01□□□□□ -0.17
APOC1-207ENST00000592176 TRPM2O94759 1503 aa14□□□□□ -0.17
APOC1-207ENST00000592176 DDX17Q92841 729 aaKnown RBP14□□□□□ -0.17
APOC1-207ENST00000592176 C8orf37Q96NL8 207 aa14□□□□□ -0.17
APOC1-207ENST00000592176 SETD1AO15047 1707 aaKnown RBP14□□□□□ -0.17
APOC1-207ENST00000592176 UNC13BO14795 1591 aa13.99□□□□□ -0.17
APOC1-207ENST00000592176 DCCP43146 1447 aa13.98□□□□□ -0.17
APOC1-207ENST00000592176 SETD5Q9C0A6 1442 aa13.98□□□□□ -0.17
APOC1-207ENST00000592176 METP08581 1390 aa13.98□□□□□ -0.17
APOC1-207ENST00000592176 E9PCH4 1651 aa13.98□□□□□ -0.17
APOC1-207ENST00000592176 RBM6P78332 1123 aaKnown RBP13.98□□□□□ -0.17
APOC1-207ENST00000592176 NGLY1Q96IV0 654 aa13.97□□□□□ -0.17
APOC1-207ENST00000592176 MST1RQ04912 1400 aa13.97□□□□□ -0.17
APOC1-207ENST00000592176 SHPRHQ149N8 1683 aa13.96□□□□□ -0.17
APOC1-207ENST00000592176 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
APOC1-207ENST00000592176 IQGAP3Q86VI3 1631 aa13.95□□□□□ -0.18
APOC1-207ENST00000592176 ADAMTS2O95450 1211 aa13.95□□□□□ -0.18
APOC1-207ENST00000592176 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
APOC1-207ENST00000592176 PPARGC1BQ86YN6 1023 aaKnown RBP13.94□□□□□ -0.18
APOC1-207ENST00000592176 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
APOC1-207ENST00000592176 VGFO15240 615 aaPredicted RBP13.93□□□□□ -0.18
APOC1-207ENST00000592176 ORAI2Q96SN7 254 aa13.92□□□□□ -0.18
APOC1-207ENST00000592176 SETBP1Q9Y6X0 1596 aa13.92□□□□□ -0.18
APOC1-207ENST00000592176 ADGRL3Q9HAR2 1447 aa13.91□□□□□ -0.18
APOC1-207ENST00000592176 USP21Q9UK80 565 aa13.91□□□□□ -0.18
APOC1-207ENST00000592176 C1orf167Q5SNV9 1468 aa13.89□□□□□ -0.19
APOC1-207ENST00000592176 TRPC5Q9UL62 973 aaPredicted RBP13.89□□□□□ -0.19
APOC1-207ENST00000592176 SOS2Q07890 1332 aaPredicted RBP13.89□□□□□ -0.19
APOC1-207ENST00000592176 XRN1Q8IZH2 1706 aaKnown RBP13.88□□□□□ -0.19
APOC1-207ENST00000592176 NRXN3Q9Y4C0 1643 aa13.88□□□□□ -0.19
APOC1-207ENST00000592176 RGS12O14924 1447 aa13.88□□□□□ -0.19
APOC1-207ENST00000592176 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
APOC1-207ENST00000592176 RPGRIP1LQ68CZ1 1315 aa13.87□□□□□ -0.19
APOC1-207ENST00000592176 FOXD1Q16676 465 aa13.86□□□□□ -0.19
APOC1-207ENST00000592176 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
APOC1-207ENST00000592176 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
APOC1-207ENST00000592176 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
APOC1-207ENST00000592176 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
APOC1-207ENST00000592176 NEXMIFQ5QGS0 1516 aa13.84□□□□□ -0.19
APOC1-207ENST00000592176 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
APOC1-207ENST00000592176 PTCH1Q13635 1447 aa13.82□□□□□ -0.2
APOC1-207ENST00000592176 SPHKAPQ2M3C7 1700 aa13.82□□□□□ -0.2
APOC1-207ENST00000592176 CCDC125Q86Z20 511 aa13.82□□□□□ -0.2
APOC1-207ENST00000592176 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
APOC1-207ENST00000592176 FOXO3O43524 673 aa13.81□□□□□ -0.2
APOC1-207ENST00000592176 NPHP3Q7Z494 1330 aa13.81□□□□□ -0.2
APOC1-207ENST00000592176 HFM1A2PYH4 1435 aa13.81□□□□□ -0.2
APOC1-207ENST00000592176 CLTCL1P53675 1640 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms