RNA–Protein interactions for RNA: ENST00000592078.1

CXXC1-217, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 686 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-217ENST00000592078 BCANQ96GW7 911 aa23.53■■□□□ 1.36
CXXC1-217ENST00000592078 NWD1Q149M9 1564 aa23.52■■□□□ 1.36
CXXC1-217ENST00000592078 ADGRL2O95490 1459 aa23.52■■□□□ 1.36
CXXC1-217ENST00000592078 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
CXXC1-217ENST00000592078 SLAIN2Q9P270 581 aa23.51■■□□□ 1.35
CXXC1-217ENST00000592078 CHIC2Q9UKJ5 165 aa23.51■■□□□ 1.35
CXXC1-217ENST00000592078 ROBO1Q9Y6N7 1651 aa23.5■■□□□ 1.35
CXXC1-217ENST00000592078 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
CXXC1-217ENST00000592078 TBX22Q9Y458 520 aa23.48■■□□□ 1.35
CXXC1-217ENST00000592078 JCADQ9P266 1359 aa23.48■■□□□ 1.35
CXXC1-217ENST00000592078 RRBP1Q9P2E9 1410 aaKnown RBP23.48■■□□□ 1.35
CXXC1-217ENST00000592078 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
CXXC1-217ENST00000592078 ANKRD50Q9ULJ7 1429 aa23.46■■□□□ 1.35
CXXC1-217ENST00000592078 POTEAQ6S8J7 498 aa23.44■■□□□ 1.34
CXXC1-217ENST00000592078 ZFYVE9O95405 1425 aa23.43■■□□□ 1.34
CXXC1-217ENST00000592078 PIK3R4Q99570 1358 aa23.43■■□□□ 1.34
CXXC1-217ENST00000592078 SPATA31A6Q5VVP1 1343 aa23.41■■□□□ 1.34
CXXC1-217ENST00000592078 CADPS2Q86UW7 1296 aa23.41■■□□□ 1.34
CXXC1-217ENST00000592078 RIMS2Q9UQ26 1411 aa23.41■■□□□ 1.34
CXXC1-217ENST00000592078 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
CXXC1-217ENST00000592078 TRIM26Q12899 539 aaPredicted RBP23.38■■□□□ 1.33
CXXC1-217ENST00000592078 C19orf44Q9H6X5 657 aa23.38■■□□□ 1.33
CXXC1-217ENST00000592078 PHLPP1O60346 1717 aa23.38■■□□□ 1.33
CXXC1-217ENST00000592078 DIP2AQ14689 1571 aa23.37■■□□□ 1.33
CXXC1-217ENST00000592078 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
CXXC1-217ENST00000592078 ZNF772Q68DY9 489 aaPredicted RBP23.36■■□□□ 1.33
CXXC1-217ENST00000592078 RBM33Q96EV2 1170 aaKnown RBP23.36■■□□□ 1.33
CXXC1-217ENST00000592078 TMEM131LA2VDJ0 1609 aa23.35■■□□□ 1.33
CXXC1-217ENST00000592078 ATF3P18847 181 aa23.35■■□□□ 1.33
CXXC1-217ENST00000592078 C14orf37Q86TY3 774 aa23.35■■□□□ 1.33
CXXC1-217ENST00000592078 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
CXXC1-217ENST00000592078 ROCK1Q13464 1354 aa23.31■■□□□ 1.32
CXXC1-217ENST00000592078 CHGAP10645 457 aaKnown RBP23.3■■□□□ 1.32
CXXC1-217ENST00000592078 UNC13BO14795 1591 aa23.29■■□□□ 1.32
CXXC1-217ENST00000592078 MEX3CQ5U5Q3 659 aaKnown RBP23.29■■□□□ 1.32
CXXC1-217ENST00000592078 COL16A1Q07092 1604 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-217ENST00000592078 DCCP43146 1447 aa23.27■■□□□ 1.32
CXXC1-217ENST00000592078 ADAMTS13Q76LX8 1427 aa23.27■■□□□ 1.32
CXXC1-217ENST00000592078 AHDC1Q5TGY3 1603 aaPredicted RBP23.27■■□□□ 1.32
CXXC1-217ENST00000592078 TRPM2O94759 1503 aa23.26■■□□□ 1.31
CXXC1-217ENST00000592078 MYO5BQ9ULV0 1848 aa23.24■■□□□ 1.31
CXXC1-217ENST00000592078 AMOTL2Q9Y2J4 779 aa23.23■■□□□ 1.31
CXXC1-217ENST00000592078 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.22■■□□□ 1.31
CXXC1-217ENST00000592078 IQGAP3Q86VI3 1631 aa23.22■■□□□ 1.31
CXXC1-217ENST00000592078 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
CXXC1-217ENST00000592078 E9PCH4 1651 aa23.2■■□□□ 1.3
CXXC1-217ENST00000592078 NUP155O75694 1391 aa23.19■■□□□ 1.3
CXXC1-217ENST00000592078 RXRBP28702 533 aa23.19■■□□□ 1.3
CXXC1-217ENST00000592078 CDK12Q9NYV4 1490 aaPredicted RBP23.18■■□□□ 1.3
CXXC1-217ENST00000592078 BRINP3Q76B58 766 aa23.18■■□□□ 1.3
CXXC1-217ENST00000592078 LRRC59Q96AG4 307 aaKnown RBP23.17■■□□□ 1.3
CXXC1-217ENST00000592078 LRP6O75581 1613 aa23.15■■□□□ 1.3
CXXC1-217ENST00000592078 UPF1Q92900 1129 aaKnown RBP eCLIP23.15■■□□□ 1.3
CXXC1-217ENST00000592078 SETD5Q9C0A6 1442 aa23.15■■□□□ 1.3
CXXC1-217ENST00000592078 NUTM2DQ5VT03 806 aaPredicted RBP23.14■■□□□ 1.29
CXXC1-217ENST00000592078 SETBP1Q9Y6X0 1596 aa23.13■■□□□ 1.29
CXXC1-217ENST00000592078 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
CXXC1-217ENST00000592078 SETD1AO15047 1707 aaKnown RBP23.09■■□□□ 1.29
CXXC1-217ENST00000592078 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
CXXC1-217ENST00000592078 TRIM52Q96A61 297 aa23.09■■□□□ 1.29
CXXC1-217ENST00000592078 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
CXXC1-217ENST00000592078 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.29
CXXC1-217ENST00000592078 ITGAEP38570 1179 aa23.08■■□□□ 1.29
CXXC1-217ENST00000592078 XRN1Q8IZH2 1706 aaKnown RBP23.07■■□□□ 1.28
CXXC1-217ENST00000592078 MST1RQ04912 1400 aa23.07■■□□□ 1.28
CXXC1-217ENST00000592078 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
CXXC1-217ENST00000592078 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
CXXC1-217ENST00000592078 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
CXXC1-217ENST00000592078 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
CXXC1-217ENST00000592078 AFF2P51816 1311 aa23.05■■□□□ 1.28
CXXC1-217ENST00000592078 RBM6P78332 1123 aaKnown RBP23.04■■□□□ 1.28
CXXC1-217ENST00000592078 FOXD1Q16676 465 aa23.03■■□□□ 1.28
CXXC1-217ENST00000592078 NHSL1Q5SYE7 1610 aa23.03■■□□□ 1.28
CXXC1-217ENST00000592078 SPHKAPQ2M3C7 1700 aa23.02■■□□□ 1.28
CXXC1-217ENST00000592078 NGLY1Q96IV0 654 aa23.02■■□□□ 1.28
CXXC1-217ENST00000592078 NRXN3Q9Y4C0 1643 aa23.01■■□□□ 1.27
CXXC1-217ENST00000592078 VGFO15240 615 aaPredicted RBP23.01■■□□□ 1.27
CXXC1-217ENST00000592078 METP08581 1390 aa23.01■■□□□ 1.27
CXXC1-217ENST00000592078 QTRT2Q9H974 415 aaKnown RBP23■■□□□ 1.27
CXXC1-217ENST00000592078 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
CXXC1-217ENST00000592078 HRCP23327 699 aa22.99■■□□□ 1.27
CXXC1-217ENST00000592078 PNPLA6Q8IY17 1366 aa22.98■■□□□ 1.27
CXXC1-217ENST00000592078 NAIPQ13075 1403 aa22.97■■□□□ 1.27
CXXC1-217ENST00000592078 C8orf37Q96NL8 207 aa22.96■■□□□ 1.27
CXXC1-217ENST00000592078 RPGRIP1LQ68CZ1 1315 aa22.96■■□□□ 1.27
CXXC1-217ENST00000592078 PTCH1Q13635 1447 aa22.95■■□□□ 1.26
CXXC1-217ENST00000592078 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
CXXC1-217ENST00000592078 C1orf167Q5SNV9 1468 aa22.93■■□□□ 1.26
CXXC1-217ENST00000592078 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
CXXC1-217ENST00000592078 LAMC1P11047 1609 aa22.93■■□□□ 1.26
CXXC1-217ENST00000592078 SOS2Q07890 1332 aaPredicted RBP22.91■■□□□ 1.26
CXXC1-217ENST00000592078 KIF1BO60333 1816 aa22.9■■□□□ 1.26
CXXC1-217ENST00000592078 TRPC5Q9UL62 973 aaPredicted RBP22.89■■□□□ 1.25
CXXC1-217ENST00000592078 ATAD2Q6PL18 1390 aa22.89■■□□□ 1.25
CXXC1-217ENST00000592078 ACIN1Q9UKV3 1341 aaKnown RBP22.88■■□□□ 1.25
CXXC1-217ENST00000592078 RGS12O14924 1447 aa22.88■■□□□ 1.25
CXXC1-217ENST00000592078 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
CXXC1-217ENST00000592078 FNBP4Q8N3X1 1017 aaPredicted RBP22.87■■□□□ 1.25
CXXC1-217ENST00000592078 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
CXXC1-217ENST00000592078 CCDC125Q86Z20 511 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms