RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 SLC26A8Q96RN1 970 aa29.91■■■□□ 2.38
TNFRSF11A-204ENST00000592013 E9PCH4 1651 aa29.91■■■□□ 2.38
TNFRSF11A-204ENST00000592013 RIMS2Q9UQ26 1411 aa29.9■■■□□ 2.38
TNFRSF11A-204ENST00000592013 TMEM131LA2VDJ0 1609 aa29.9■■■□□ 2.38
TNFRSF11A-204ENST00000592013 NKTRP30414 1462 aaKnown RBP29.9■■■□□ 2.38
TNFRSF11A-204ENST00000592013 ZFYVE9O95405 1425 aa29.89■■■□□ 2.38
TNFRSF11A-204ENST00000592013 RRBP1Q9P2E9 1410 aaKnown RBP29.89■■■□□ 2.38
TNFRSF11A-204ENST00000592013 PROSER2Q86WR7 435 aaPredicted RBP29.88■■■□□ 2.37
TNFRSF11A-204ENST00000592013 ALKQ9UM73 1620 aa29.85■■■□□ 2.37
TNFRSF11A-204ENST00000592013 TMEM94Q12767 1356 aa29.85■■■□□ 2.37
TNFRSF11A-204ENST00000592013 NWD1Q149M9 1564 aa29.82■■■□□ 2.36
TNFRSF11A-204ENST00000592013 TBX22Q9Y458 520 aa29.82■■■□□ 2.36
TNFRSF11A-204ENST00000592013 SOCS7O14512 581 aa29.81■■■□□ 2.36
TNFRSF11A-204ENST00000592013 ILDR2Q71H61 639 aa29.8■■■□□ 2.36
TNFRSF11A-204ENST00000592013 MYO5BQ9ULV0 1848 aa29.8■■■□□ 2.36
TNFRSF11A-204ENST00000592013 MSH6P52701 1360 aa29.79■■■□□ 2.36
TNFRSF11A-204ENST00000592013 DIP2AQ14689 1571 aa29.79■■■□□ 2.36
TNFRSF11A-204ENST00000592013 PIK3R4Q99570 1358 aa29.78■■■□□ 2.36
TNFRSF11A-204ENST00000592013 FAM135BQ49AJ0 1406 aa29.78■■■□□ 2.36
TNFRSF11A-204ENST00000592013 XIRP1Q702N8 1843 aaKnown RBP29.77■■■□□ 2.36
TNFRSF11A-204ENST00000592013 MED1Q15648 1581 aaPredicted RBP29.76■■■□□ 2.35
TNFRSF11A-204ENST00000592013 NCOA3Q9Y6Q9 1424 aa29.75■■■□□ 2.35
TNFRSF11A-204ENST00000592013 PHF23Q9BUL5 403 aaPredicted RBP29.74■■■□□ 2.35
TNFRSF11A-204ENST00000592013 SPHKAPQ2M3C7 1700 aa29.74■■■□□ 2.35
TNFRSF11A-204ENST00000592013 NAIPQ13075 1403 aa29.71■■■□□ 2.35
TNFRSF11A-204ENST00000592013 CHD2O14647 1828 aaKnown RBP29.71■■■□□ 2.35
TNFRSF11A-204ENST00000592013 ZNF326Q5BKZ1 582 aaKnown RBP29.69■■■□□ 2.34
TNFRSF11A-204ENST00000592013 HFM1A2PYH4 1435 aa29.69■■■□□ 2.34
TNFRSF11A-204ENST00000592013 TRPM2O94759 1503 aa29.68■■■□□ 2.34
TNFRSF11A-204ENST00000592013 C14orf37Q86TY3 774 aa29.67■■■□□ 2.34
TNFRSF11A-204ENST00000592013 SENP3Q9H4L4 574 aaPredicted RBP29.67■■■□□ 2.34
TNFRSF11A-204ENST00000592013 ADAMTS13Q76LX8 1427 aa29.65■■■□□ 2.34
TNFRSF11A-204ENST00000592013 TRIM52Q96A61 297 aa29.65■■■□□ 2.34
TNFRSF11A-204ENST00000592013 NUTM2DQ5VT03 806 aaPredicted RBP29.64■■■□□ 2.34
TNFRSF11A-204ENST00000592013 SLAIN2Q9P270 581 aa29.64■■■□□ 2.34
TNFRSF11A-204ENST00000592013 CADPS2Q86UW7 1296 aa29.61■■■□□ 2.33
TNFRSF11A-204ENST00000592013 RBM33Q96EV2 1170 aaKnown RBP29.61■■■□□ 2.33
TNFRSF11A-204ENST00000592013 ACIN1Q9UKV3 1341 aaKnown RBP29.61■■■□□ 2.33
TNFRSF11A-204ENST00000592013 ROBO1Q9Y6N7 1651 aa29.6■■■□□ 2.33
TNFRSF11A-204ENST00000592013 C19orf44Q9H6X5 657 aa29.59■■■□□ 2.33
TNFRSF11A-204ENST00000592013 ATF3P18847 181 aa29.58■■■□□ 2.33
TNFRSF11A-204ENST00000592013 SETBP1Q9Y6X0 1596 aa29.58■■■□□ 2.33
TNFRSF11A-204ENST00000592013 SLC4A1APQ9BWU0 796 aaKnown RBP29.57■■■□□ 2.32
TNFRSF11A-204ENST00000592013 AMOTL2Q9Y2J4 779 aa29.57■■■□□ 2.32
TNFRSF11A-204ENST00000592013 KIF1BO60333 1816 aa29.55■■■□□ 2.32
TNFRSF11A-204ENST00000592013 VGFO15240 615 aaPredicted RBP29.53■■■□□ 2.32
TNFRSF11A-204ENST00000592013 CLTCL1P53675 1640 aa29.53■■■□□ 2.32
TNFRSF11A-204ENST00000592013 RPGRIP1LQ68CZ1 1315 aa29.5■■■□□ 2.31
TNFRSF11A-204ENST00000592013 DCCP43146 1447 aa29.49■■■□□ 2.31
TNFRSF11A-204ENST00000592013 NEXMIFQ5QGS0 1516 aa29.47■■■□□ 2.31
TNFRSF11A-204ENST00000592013 JCADQ9P266 1359 aa29.45■■■□□ 2.31
TNFRSF11A-204ENST00000592013 PHLPP1O60346 1717 aa29.45■■■□□ 2.3
TNFRSF11A-204ENST00000592013 NRXN3Q9Y4C0 1643 aa29.45■■■□□ 2.3
TNFRSF11A-204ENST00000592013 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.44■■■□□ 2.3
TNFRSF11A-204ENST00000592013 XRN1Q8IZH2 1706 aaKnown RBP29.43■■■□□ 2.3
TNFRSF11A-204ENST00000592013 PTPRUQ92729 1446 aa29.43■■■□□ 2.3
TNFRSF11A-204ENST00000592013 METP08581 1390 aa29.39■■■□□ 2.3
TNFRSF11A-204ENST00000592013 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
TNFRSF11A-204ENST00000592013 SPATA31A6Q5VVP1 1343 aa29.36■■■□□ 2.29
TNFRSF11A-204ENST00000592013 AHDC1Q5TGY3 1603 aaPredicted RBP29.34■■■□□ 2.29
TNFRSF11A-204ENST00000592013 ADGRL3Q9HAR2 1447 aa29.32■■■□□ 2.28
TNFRSF11A-204ENST00000592013 MPHOSPH9Q99550 1183 aa29.32■■■□□ 2.28
TNFRSF11A-204ENST00000592013 COL16A1Q07092 1604 aaPredicted RBP29.31■■■□□ 2.28
TNFRSF11A-204ENST00000592013 PTCH1Q13635 1447 aa29.31■■■□□ 2.28
TNFRSF11A-204ENST00000592013 BRINP3Q76B58 766 aa29.29■■■□□ 2.28
TNFRSF11A-204ENST00000592013 ANKRD30BQ9BXX2 1392 aa29.27■■■□□ 2.28
TNFRSF11A-204ENST00000592013 PPLO60437 1756 aa29.27■■■□□ 2.28
TNFRSF11A-204ENST00000592013 PRAG1Q86YV5 1406 aa29.27■■■□□ 2.28
TNFRSF11A-204ENST00000592013 MST1RQ04912 1400 aa29.26■■■□□ 2.27
TNFRSF11A-204ENST00000592013 MEX3CQ5U5Q3 659 aaKnown RBP29.25■■■□□ 2.27
TNFRSF11A-204ENST00000592013 RGS17Q9UGC6 210 aaPredicted RBP29.25■■■□□ 2.27
TNFRSF11A-204ENST00000592013 ASXL1Q8IXJ9 1541 aa29.25■■■□□ 2.27
TNFRSF11A-204ENST00000592013 SETD5Q9C0A6 1442 aa29.24■■■□□ 2.27
TNFRSF11A-204ENST00000592013 SHPRHQ149N8 1683 aa29.22■■■□□ 2.27
TNFRSF11A-204ENST00000592013 FOXD1Q16676 465 aa29.22■■■□□ 2.27
TNFRSF11A-204ENST00000592013 LRRC59Q96AG4 307 aaKnown RBP29.21■■■□□ 2.27
TNFRSF11A-204ENST00000592013 SETD1AO15047 1707 aaKnown RBP29.19■■■□□ 2.26
TNFRSF11A-204ENST00000592013 NALCNQ8IZF0 1738 aa29.19■■■□□ 2.26
TNFRSF11A-204ENST00000592013 RGL3Q3MIN7 710 aa29.18■■■□□ 2.26
TNFRSF11A-204ENST00000592013 ZNF772Q68DY9 489 aaPredicted RBP29.18■■■□□ 2.26
TNFRSF11A-204ENST00000592013 SPATA31E1Q6ZUB1 1445 aa29.18■■■□□ 2.26
TNFRSF11A-204ENST00000592013 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
TNFRSF11A-204ENST00000592013 NHSL1Q5SYE7 1610 aa29.15■■■□□ 2.26
TNFRSF11A-204ENST00000592013 POTEAQ6S8J7 498 aa29.13■■■□□ 2.25
TNFRSF11A-204ENST00000592013 C1orf167Q5SNV9 1468 aa29.12■■■□□ 2.25
TNFRSF11A-204ENST00000592013 ADGRF5Q8IZF2 1346 aa29.11■■■□□ 2.25
TNFRSF11A-204ENST00000592013 IFT172Q9UG01 1749 aa29.08■■■□□ 2.25
TNFRSF11A-204ENST00000592013 LRP6O75581 1613 aa29.07■■■□□ 2.24
TNFRSF11A-204ENST00000592013 LRPPRCP42704 1394 aaKnown RBP29.07■■■□□ 2.24
TNFRSF11A-204ENST00000592013 RAB3GAP2Q9H2M9 1393 aa29.07■■■□□ 2.24
TNFRSF11A-204ENST00000592013 TECPR2O15040 1411 aa29.06■■■□□ 2.24
TNFRSF11A-204ENST00000592013 PIK3C2GO75747 1445 aa29.06■■■□□ 2.24
TNFRSF11A-204ENST00000592013 ABCC11Q96J66 1382 aa29.06■■■□□ 2.24
TNFRSF11A-204ENST00000592013 NUTM2BA6NNL0 878 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF11A-204ENST00000592013 NUTM2EB1AL46 878 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF11A-204ENST00000592013 NUTM2AQ8IVF1 878 aaPredicted RBP29.06■■■□□ 2.24
TNFRSF11A-204ENST00000592013 CDC42BPGQ6DT37 1551 aa29.05■■■□□ 2.24
TNFRSF11A-204ENST00000592013 LAMC1P11047 1609 aa29.03■■■□□ 2.24
TNFRSF11A-204ENST00000592013 HRCP23327 699 aa29.02■■■□□ 2.24
TNFRSF11A-204ENST00000592013 STK26Q9P289 416 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms