RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 LTBP4Q8N2S1 1624 aa23.72■■□□□ 1.39
PRKCSH-213ENST00000591510 NEXMIFQ5QGS0 1516 aa23.71■■□□□ 1.39
PRKCSH-213ENST00000591510 CCDC144AA2RUR9 1427 aa23.7■■□□□ 1.38
PRKCSH-213ENST00000591510 CHGAP10645 457 aaKnown RBP23.68■■□□□ 1.38
PRKCSH-213ENST00000591510 PLEKHG1Q9ULL1 1385 aa23.67■■□□□ 1.38
PRKCSH-213ENST00000591510 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
PRKCSH-213ENST00000591510 PPLO60437 1756 aa23.65■■□□□ 1.38
PRKCSH-213ENST00000591510 NRXN3Q9Y4C0 1643 aa23.64■■□□□ 1.38
PRKCSH-213ENST00000591510 IFT172Q9UG01 1749 aa23.64■■□□□ 1.37
PRKCSH-213ENST00000591510 ZNF335Q9H4Z2 1342 aaPredicted RBP23.63■■□□□ 1.37
PRKCSH-213ENST00000591510 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
PRKCSH-213ENST00000591510 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
PRKCSH-213ENST00000591510 SETBP1Q9Y6X0 1596 aa23.61■■□□□ 1.37
PRKCSH-213ENST00000591510 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
PRKCSH-213ENST00000591510 DHX57Q6P158 1386 aaKnown RBP23.59■■□□□ 1.37
PRKCSH-213ENST00000591510 DIP2AQ14689 1571 aa23.58■■□□□ 1.37
PRKCSH-213ENST00000591510 NUTM2DQ5VT03 806 aaPredicted RBP23.58■■□□□ 1.37
PRKCSH-213ENST00000591510 RPGRIP1LQ68CZ1 1315 aa23.58■■□□□ 1.36
PRKCSH-213ENST00000591510 HDGFP51858 240 aaKnown RBP23.57■■□□□ 1.36
PRKCSH-213ENST00000591510 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
PRKCSH-213ENST00000591510 NWD1Q149M9 1564 aa23.56■■□□□ 1.36
PRKCSH-213ENST00000591510 SETD1AO15047 1707 aaKnown RBP23.55■■□□□ 1.36
PRKCSH-213ENST00000591510 PPP1R15AO75807 674 aaPredicted RBP23.54■■□□□ 1.36
PRKCSH-213ENST00000591510 CPS1P31327 1500 aa23.54■■□□□ 1.36
PRKCSH-213ENST00000591510 SLC26A8Q96RN1 970 aa23.53■■□□□ 1.36
PRKCSH-213ENST00000591510 CHD2O14647 1828 aaKnown RBP23.52■■□□□ 1.36
PRKCSH-213ENST00000591510 TBX22Q9Y458 520 aa23.51■■□□□ 1.35
PRKCSH-213ENST00000591510 IQSEC2Q5JU85 1478 aa23.5■■□□□ 1.35
PRKCSH-213ENST00000591510 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
PRKCSH-213ENST00000591510 CERKQ8TCT0 537 aa23.5■■□□□ 1.35
PRKCSH-213ENST00000591510 MYOM2P54296 1465 aa23.49■■□□□ 1.35
PRKCSH-213ENST00000591510 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
PRKCSH-213ENST00000591510 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
PRKCSH-213ENST00000591510 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
PRKCSH-213ENST00000591510 ADGRF5Q8IZF2 1346 aa23.47■■□□□ 1.35
PRKCSH-213ENST00000591510 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
PRKCSH-213ENST00000591510 LRRC7Q96NW7 1537 aa23.47■■□□□ 1.35
PRKCSH-213ENST00000591510 PIK3C2GO75747 1445 aa23.46■■□□□ 1.35
PRKCSH-213ENST00000591510 XRN1Q8IZH2 1706 aaKnown RBP23.46■■□□□ 1.35
PRKCSH-213ENST00000591510 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
PRKCSH-213ENST00000591510 PCGF6Q9BYE7 350 aa23.46■■□□□ 1.35
PRKCSH-213ENST00000591510 ALKQ9UM73 1620 aa23.46■■□□□ 1.35
PRKCSH-213ENST00000591510 XIRP1Q702N8 1843 aaKnown RBP23.45■■□□□ 1.34
PRKCSH-213ENST00000591510 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.34
PRKCSH-213ENST00000591510 METP08581 1390 aa23.44■■□□□ 1.34
PRKCSH-213ENST00000591510 KCNA6P17658 529 aa23.44■■□□□ 1.34
PRKCSH-213ENST00000591510 ASXL1Q8IXJ9 1541 aa23.42■■□□□ 1.34
PRKCSH-213ENST00000591510 BCANQ96GW7 911 aa23.41■■□□□ 1.34
PRKCSH-213ENST00000591510 PRAG1Q86YV5 1406 aa23.4■■□□□ 1.34
PRKCSH-213ENST00000591510 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
PRKCSH-213ENST00000591510 LAMC1P11047 1609 aa23.35■■□□□ 1.33
PRKCSH-213ENST00000591510 TMEM94Q12767 1356 aa23.33■■□□□ 1.33
PRKCSH-213ENST00000591510 STAC3Q96MF2 364 aa23.32■■□□□ 1.32
PRKCSH-213ENST00000591510 DCAF11Q8TEB1 546 aa23.31■■□□□ 1.32
PRKCSH-213ENST00000591510 C14orf93Q9H972 538 aaKnown RBP23.31■■□□□ 1.32
PRKCSH-213ENST00000591510 AMOTL2Q9Y2J4 779 aa23.31■■□□□ 1.32
PRKCSH-213ENST00000591510 ADGRB1O14514 1584 aa23.31■■□□□ 1.32
PRKCSH-213ENST00000591510 FBXO41Q8TF61 875 aa23.3■■□□□ 1.32
PRKCSH-213ENST00000591510 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
PRKCSH-213ENST00000591510 TECPR2O15040 1411 aa23.29■■□□□ 1.32
PRKCSH-213ENST00000591510 KNDC1Q76NI1 1749 aa23.28■■□□□ 1.32
PRKCSH-213ENST00000591510 NCOA3Q9Y6Q9 1424 aa23.28■■□□□ 1.32
PRKCSH-213ENST00000591510 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
PRKCSH-213ENST00000591510 ROBO2Q9HCK4 1378 aa23.27■■□□□ 1.31
PRKCSH-213ENST00000591510 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
PRKCSH-213ENST00000591510 L3MBTL2Q969R5 705 aa23.26■■□□□ 1.31
PRKCSH-213ENST00000591510 LRPPRCP42704 1394 aaKnown RBP23.26■■□□□ 1.31
PRKCSH-213ENST00000591510 RBM33Q96EV2 1170 aaKnown RBP23.25■■□□□ 1.31
PRKCSH-213ENST00000591510 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
PRKCSH-213ENST00000591510 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
PRKCSH-213ENST00000591510 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
PRKCSH-213ENST00000591510 ABCC11Q96J66 1382 aa23.23■■□□□ 1.31
PRKCSH-213ENST00000591510 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
PRKCSH-213ENST00000591510 TMEM132EQ6IEE7 984 aa23.22■■□□□ 1.31
PRKCSH-213ENST00000591510 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
PRKCSH-213ENST00000591510 ILDR1Q86SU0 546 aaPredicted RBP23.21■■□□□ 1.31
PRKCSH-213ENST00000591510 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.2■■□□□ 1.3
PRKCSH-213ENST00000591510 CLSPNQ9HAW4 1339 aa23.19■■□□□ 1.3
PRKCSH-213ENST00000591510 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
PRKCSH-213ENST00000591510 DLC1Q96QB1 1528 aa23.18■■□□□ 1.3
PRKCSH-213ENST00000591510 UBAP1LF5GYI3 381 aa23.17■■□□□ 1.3
PRKCSH-213ENST00000591510 DCCP43146 1447 aa23.16■■□□□ 1.3
PRKCSH-213ENST00000591510 FAM135BQ49AJ0 1406 aa23.16■■□□□ 1.3
PRKCSH-213ENST00000591510 MSH6P52701 1360 aa23.15■■□□□ 1.3
PRKCSH-213ENST00000591510 TRPM1Q7Z4N2 1603 aa23.15■■□□□ 1.3
PRKCSH-213ENST00000591510 PLEKHH1Q9ULM0 1364 aa23.14■■□□□ 1.29
PRKCSH-213ENST00000591510 SIRT1Q96EB6 747 aa23.13■■□□□ 1.29
PRKCSH-213ENST00000591510 TOM1O60784 492 aa23.12■■□□□ 1.29
PRKCSH-213ENST00000591510 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
PRKCSH-213ENST00000591510 STK26Q9P289 416 aa23.12■■□□□ 1.29
PRKCSH-213ENST00000591510 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
PRKCSH-213ENST00000591510 NBPF8Q3BBV2 869 aa23.1■■□□□ 1.29
PRKCSH-213ENST00000591510 TONSLQ96HA7 1378 aa23.1■■□□□ 1.29
PRKCSH-213ENST00000591510 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
PRKCSH-213ENST00000591510 CDC42BPGQ6DT37 1551 aa23.09■■□□□ 1.29
PRKCSH-213ENST00000591510 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
PRKCSH-213ENST00000591510 MST1RQ04912 1400 aa23.08■■□□□ 1.28
PRKCSH-213ENST00000591510 GPRASP1Q5JY77 1395 aa23.06■■□□□ 1.28
PRKCSH-213ENST00000591510 ROBO1Q9Y6N7 1651 aa23.06■■□□□ 1.28
PRKCSH-213ENST00000591510 ADGRB2O60241 1585 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms