RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 GCC2Q8IWJ2 1684 aa24.19■■□□□ 1.46
CIRBP-230ENST00000591055 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
CIRBP-230ENST00000591055 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
CIRBP-230ENST00000591055 PPP1R15AO75807 674 aaPredicted RBP24.17■■□□□ 1.46
CIRBP-230ENST00000591055 ZFYVE9O95405 1425 aa24.17■■□□□ 1.46
CIRBP-230ENST00000591055 RIMS2Q9UQ26 1411 aa24.17■■□□□ 1.46
CIRBP-230ENST00000591055 CHGAP10645 457 aaKnown RBP24.15■■□□□ 1.46
CIRBP-230ENST00000591055 RBM33Q96EV2 1170 aaKnown RBP24.15■■□□□ 1.46
CIRBP-230ENST00000591055 FAM135BQ49AJ0 1406 aa24.15■■□□□ 1.46
CIRBP-230ENST00000591055 PLEKHG1Q9ULL1 1385 aa24.15■■□□□ 1.46
CIRBP-230ENST00000591055 NKTRP30414 1462 aaKnown RBP24.14■■□□□ 1.46
CIRBP-230ENST00000591055 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.46
CIRBP-230ENST00000591055 ITGAEP38570 1179 aa24.14■■□□□ 1.45
CIRBP-230ENST00000591055 NWD1Q149M9 1564 aa24.14■■□□□ 1.45
CIRBP-230ENST00000591055 E9PCH4 1651 aa24.12■■□□□ 1.45
CIRBP-230ENST00000591055 IQGAP3Q86VI3 1631 aa24.11■■□□□ 1.45
CIRBP-230ENST00000591055 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.11■■□□□ 1.45
CIRBP-230ENST00000591055 PPARGC1BQ86YN6 1023 aaKnown RBP24.1■■□□□ 1.45
CIRBP-230ENST00000591055 NUP155O75694 1391 aa24.1■■□□□ 1.45
CIRBP-230ENST00000591055 MSH6P52701 1360 aa24.08■■□□□ 1.45
CIRBP-230ENST00000591055 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
CIRBP-230ENST00000591055 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
CIRBP-230ENST00000591055 ROBO1Q9Y6N7 1651 aa24.06■■□□□ 1.44
CIRBP-230ENST00000591055 NUTM2DQ5VT03 806 aaPredicted RBP24.06■■□□□ 1.44
CIRBP-230ENST00000591055 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
CIRBP-230ENST00000591055 ADAMTS13Q76LX8 1427 aa24.01■■□□□ 1.43
CIRBP-230ENST00000591055 DIP2AQ14689 1571 aa23.99■■□□□ 1.43
CIRBP-230ENST00000591055 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
CIRBP-230ENST00000591055 RGS17Q9UGC6 210 aaPredicted RBP23.98■■□□□ 1.43
CIRBP-230ENST00000591055 PIK3R4Q99570 1358 aa23.97■■□□□ 1.43
CIRBP-230ENST00000591055 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
CIRBP-230ENST00000591055 TRPM2O94759 1503 aa23.93■■□□□ 1.42
CIRBP-230ENST00000591055 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
CIRBP-230ENST00000591055 SPHKAPQ2M3C7 1700 aa23.93■■□□□ 1.42
CIRBP-230ENST00000591055 C19orf44Q9H6X5 657 aa23.91■■□□□ 1.42
CIRBP-230ENST00000591055 AMOTL2Q9Y2J4 779 aa23.91■■□□□ 1.42
CIRBP-230ENST00000591055 ATF3P18847 181 aa23.9■■□□□ 1.42
CIRBP-230ENST00000591055 ZNF326Q5BKZ1 582 aaKnown RBP23.9■■□□□ 1.42
CIRBP-230ENST00000591055 CADPS2Q86UW7 1296 aa23.9■■□□□ 1.42
CIRBP-230ENST00000591055 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.41
CIRBP-230ENST00000591055 JCADQ9P266 1359 aa23.89■■□□□ 1.41
CIRBP-230ENST00000591055 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-230ENST00000591055 PTPRUQ92729 1446 aa23.88■■□□□ 1.41
CIRBP-230ENST00000591055 POTEAQ6S8J7 498 aa23.85■■□□□ 1.41
CIRBP-230ENST00000591055 SETBP1Q9Y6X0 1596 aa23.84■■□□□ 1.41
CIRBP-230ENST00000591055 COL16A1Q07092 1604 aaPredicted RBP23.84■■□□□ 1.41
CIRBP-230ENST00000591055 NRXN3Q9Y4C0 1643 aa23.84■■□□□ 1.41
CIRBP-230ENST00000591055 NAIPQ13075 1403 aa23.84■■□□□ 1.41
CIRBP-230ENST00000591055 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
CIRBP-230ENST00000591055 XRN1Q8IZH2 1706 aaKnown RBP23.8■■□□□ 1.4
CIRBP-230ENST00000591055 METP08581 1390 aa23.79■■□□□ 1.4
CIRBP-230ENST00000591055 AHDC1Q5TGY3 1603 aaPredicted RBP23.79■■□□□ 1.4
CIRBP-230ENST00000591055 DCCP43146 1447 aa23.78■■□□□ 1.4
CIRBP-230ENST00000591055 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
CIRBP-230ENST00000591055 NEXMIFQ5QGS0 1516 aa23.78■■□□□ 1.4
CIRBP-230ENST00000591055 BRINP3Q76B58 766 aa23.77■■□□□ 1.4
CIRBP-230ENST00000591055 SPATA31A6Q5VVP1 1343 aa23.77■■□□□ 1.4
CIRBP-230ENST00000591055 KIF1BO60333 1816 aa23.77■■□□□ 1.4
CIRBP-230ENST00000591055 HFM1A2PYH4 1435 aa23.74■■□□□ 1.39
CIRBP-230ENST00000591055 MEX3CQ5U5Q3 659 aaKnown RBP23.73■■□□□ 1.39
CIRBP-230ENST00000591055 LRP6O75581 1613 aa23.72■■□□□ 1.39
CIRBP-230ENST00000591055 MST1RQ04912 1400 aa23.71■■□□□ 1.39
CIRBP-230ENST00000591055 SLC4A1APQ9BWU0 796 aaKnown RBP23.71■■□□□ 1.39
CIRBP-230ENST00000591055 SHPRHQ149N8 1683 aa23.7■■□□□ 1.39
CIRBP-230ENST00000591055 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
CIRBP-230ENST00000591055 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
CIRBP-230ENST00000591055 ADGRL3Q9HAR2 1447 aa23.69■■□□□ 1.38
CIRBP-230ENST00000591055 RPGRIP1LQ68CZ1 1315 aa23.66■■□□□ 1.38
CIRBP-230ENST00000591055 ZNF772Q68DY9 489 aaPredicted RBP23.65■■□□□ 1.38
CIRBP-230ENST00000591055 NUTM2BA6NNL0 878 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-230ENST00000591055 NUTM2EB1AL46 878 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-230ENST00000591055 NUTM2AQ8IVF1 878 aaPredicted RBP23.64■■□□□ 1.37
CIRBP-230ENST00000591055 NALCNQ8IZF0 1738 aa23.64■■□□□ 1.37
CIRBP-230ENST00000591055 NHSL1Q5SYE7 1610 aa23.63■■□□□ 1.37
CIRBP-230ENST00000591055 SETD5Q9C0A6 1442 aa23.63■■□□□ 1.37
CIRBP-230ENST00000591055 PTCH1Q13635 1447 aa23.62■■□□□ 1.37
CIRBP-230ENST00000591055 LRRC59Q96AG4 307 aaKnown RBP23.62■■□□□ 1.37
CIRBP-230ENST00000591055 SETD1AO15047 1707 aaKnown RBP23.61■■□□□ 1.37
CIRBP-230ENST00000591055 DDX17Q92841 729 aaKnown RBP23.6■■□□□ 1.37
CIRBP-230ENST00000591055 FOXD1Q16676 465 aa23.59■■□□□ 1.37
CIRBP-230ENST00000591055 ROBO2Q9HCK4 1378 aa23.59■■□□□ 1.37
CIRBP-230ENST00000591055 PPLO60437 1756 aa23.58■■□□□ 1.37
CIRBP-230ENST00000591055 C1orf167Q5SNV9 1468 aa23.58■■□□□ 1.37
CIRBP-230ENST00000591055 PRAG1Q86YV5 1406 aa23.55■■□□□ 1.36
CIRBP-230ENST00000591055 AFF2P51816 1311 aa23.54■■□□□ 1.36
CIRBP-230ENST00000591055 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
CIRBP-230ENST00000591055 CCDC144AA2RUR9 1427 aa23.53■■□□□ 1.36
CIRBP-230ENST00000591055 RXRBP28702 533 aa23.53■■□□□ 1.36
CIRBP-230ENST00000591055 RGL3Q3MIN7 710 aa23.51■■□□□ 1.35
CIRBP-230ENST00000591055 ORAI2Q96SN7 254 aa23.51■■□□□ 1.35
CIRBP-230ENST00000591055 MPHOSPH9Q99550 1183 aa23.51■■□□□ 1.35
CIRBP-230ENST00000591055 C8orf37Q96NL8 207 aa23.5■■□□□ 1.35
CIRBP-230ENST00000591055 ADGRF5Q8IZF2 1346 aa23.5■■□□□ 1.35
CIRBP-230ENST00000591055 LAMC1P11047 1609 aa23.48■■□□□ 1.35
CIRBP-230ENST00000591055 SOS2Q07890 1332 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-230ENST00000591055 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
CIRBP-230ENST00000591055 SPATA31E1Q6ZUB1 1445 aa23.47■■□□□ 1.35
CIRBP-230ENST00000591055 CDK12Q9NYV4 1490 aaPredicted RBP23.45■■□□□ 1.34
CIRBP-230ENST00000591055 STK26Q9P289 416 aa23.45■■□□□ 1.34
CIRBP-230ENST00000591055 ADAMTS2O95450 1211 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms