RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TMEM94Q12767 1356 aa33.39■■■□□ 2.94
DDX39A-215ENST00000590696 MYO5BQ9ULV0 1848 aa33.37■■■□□ 2.93
DDX39A-215ENST00000590696 PROSER2Q86WR7 435 aaPredicted RBP33.37■■■□□ 2.93
DDX39A-215ENST00000590696 ZFYVE9O95405 1425 aa33.36■■■□□ 2.93
DDX39A-215ENST00000590696 RIMS2Q9UQ26 1411 aa33.35■■■□□ 2.93
DDX39A-215ENST00000590696 TMEM131LA2VDJ0 1609 aa33.35■■■□□ 2.93
DDX39A-215ENST00000590696 E9PCH4 1651 aa33.34■■■□□ 2.93
DDX39A-215ENST00000590696 HDGFP51858 240 aaKnown RBP33.34■■■□□ 2.93
DDX39A-215ENST00000590696 RBM33Q96EV2 1170 aaKnown RBP33.34■■■□□ 2.93
DDX39A-215ENST00000590696 CHGAP10645 457 aaKnown RBP33.33■■■□□ 2.93
DDX39A-215ENST00000590696 IQGAP3Q86VI3 1631 aa33.32■■■□□ 2.92
DDX39A-215ENST00000590696 PPP1R15AO75807 674 aaPredicted RBP33.32■■■□□ 2.92
DDX39A-215ENST00000590696 PLEKHG1Q9ULL1 1385 aa33.32■■■□□ 2.92
DDX39A-215ENST00000590696 NUP155O75694 1391 aa33.31■■■□□ 2.92
DDX39A-215ENST00000590696 NWD1Q149M9 1564 aa33.3■■■□□ 2.92
DDX39A-215ENST00000590696 PHF23Q9BUL5 403 aaPredicted RBP33.29■■■□□ 2.92
DDX39A-215ENST00000590696 NKTRP30414 1462 aaKnown RBP33.29■■■□□ 2.92
DDX39A-215ENST00000590696 FAM135BQ49AJ0 1406 aa33.28■■■□□ 2.92
DDX39A-215ENST00000590696 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.26■■■□□ 2.91
DDX39A-215ENST00000590696 NUTM2DQ5VT03 806 aaPredicted RBP33.23■■■□□ 2.91
DDX39A-215ENST00000590696 CHD2O14647 1828 aaKnown RBP33.21■■■□□ 2.91
DDX39A-215ENST00000590696 TBX22Q9Y458 520 aa33.21■■■□□ 2.91
DDX39A-215ENST00000590696 MSH6P52701 1360 aa33.19■■■□□ 2.9
DDX39A-215ENST00000590696 ROBO1Q9Y6N7 1651 aa33.17■■■□□ 2.9
DDX39A-215ENST00000590696 ADAMTS13Q76LX8 1427 aa33.14■■■□□ 2.9
DDX39A-215ENST00000590696 SLAIN2Q9P270 581 aa33.11■■■□□ 2.89
DDX39A-215ENST00000590696 DIP2AQ14689 1571 aa33.09■■■□□ 2.89
DDX39A-215ENST00000590696 RRBP1Q9P2E9 1410 aaKnown RBP33.08■■■□□ 2.89
DDX39A-215ENST00000590696 PIK3R4Q99570 1358 aa33.07■■■□□ 2.88
DDX39A-215ENST00000590696 SPHKAPQ2M3C7 1700 aa33.06■■■□□ 2.88
DDX39A-215ENST00000590696 NCOA3Q9Y6Q9 1424 aa33.06■■■□□ 2.88
DDX39A-215ENST00000590696 C14orf37Q86TY3 774 aa33.04■■■□□ 2.88
DDX39A-215ENST00000590696 RGS17Q9UGC6 210 aaPredicted RBP33.03■■■□□ 2.88
DDX39A-215ENST00000590696 TRPM2O94759 1503 aa33.02■■■□□ 2.88
DDX39A-215ENST00000590696 ZNF326Q5BKZ1 582 aaKnown RBP33■■■□□ 2.87
DDX39A-215ENST00000590696 AMOTL2Q9Y2J4 779 aa33■■■□□ 2.87
DDX39A-215ENST00000590696 NAIPQ13075 1403 aa32.99■■■□□ 2.87
DDX39A-215ENST00000590696 PHLPP1O60346 1717 aa32.98■■■□□ 2.87
DDX39A-215ENST00000590696 PTPRUQ92729 1446 aa32.98■■■□□ 2.87
DDX39A-215ENST00000590696 C19orf44Q9H6X5 657 aa32.97■■■□□ 2.87
DDX39A-215ENST00000590696 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.94■■■□□ 2.86
DDX39A-215ENST00000590696 CADPS2Q86UW7 1296 aa32.94■■■□□ 2.86
DDX39A-215ENST00000590696 NRXN3Q9Y4C0 1643 aa32.93■■■□□ 2.86
DDX39A-215ENST00000590696 ATF3P18847 181 aa32.93■■■□□ 2.86
DDX39A-215ENST00000590696 SETBP1Q9Y6X0 1596 aa32.92■■■□□ 2.86
DDX39A-215ENST00000590696 CLTCL1P53675 1640 aa32.92■■■□□ 2.86
DDX39A-215ENST00000590696 JCADQ9P266 1359 aa32.9■■■□□ 2.86
DDX39A-215ENST00000590696 TRIM52Q96A61 297 aa32.88■■■□□ 2.85
DDX39A-215ENST00000590696 COL16A1Q07092 1604 aaPredicted RBP32.86■■■□□ 2.85
DDX39A-215ENST00000590696 XRN1Q8IZH2 1706 aaKnown RBP32.85■■■□□ 2.85
DDX39A-215ENST00000590696 METP08581 1390 aa32.85■■■□□ 2.85
DDX39A-215ENST00000590696 POTEAQ6S8J7 498 aa32.85■■■□□ 2.85
DDX39A-215ENST00000590696 NEXMIFQ5QGS0 1516 aa32.85■■■□□ 2.85
DDX39A-215ENST00000590696 HFM1A2PYH4 1435 aa32.84■■■□□ 2.85
DDX39A-215ENST00000590696 KIF1BO60333 1816 aa32.83■■■□□ 2.85
DDX39A-215ENST00000590696 AHDC1Q5TGY3 1603 aaPredicted RBP32.79■■■□□ 2.84
DDX39A-215ENST00000590696 DCCP43146 1447 aa32.78■■■□□ 2.84
DDX39A-215ENST00000590696 BRINP3Q76B58 766 aa32.78■■■□□ 2.84
DDX39A-215ENST00000590696 SLC4A1APQ9BWU0 796 aaKnown RBP32.78■■■□□ 2.84
DDX39A-215ENST00000590696 SPATA31A6Q5VVP1 1343 aa32.74■■■□□ 2.83
DDX39A-215ENST00000590696 VGFO15240 615 aaPredicted RBP32.73■■■□□ 2.83
DDX39A-215ENST00000590696 MST1RQ04912 1400 aa32.7■■■□□ 2.83
DDX39A-215ENST00000590696 LRP6O75581 1613 aa32.69■■■□□ 2.82
DDX39A-215ENST00000590696 SHPRHQ149N8 1683 aa32.68■■■□□ 2.82
DDX39A-215ENST00000590696 ADGRL3Q9HAR2 1447 aa32.68■■■□□ 2.82
DDX39A-215ENST00000590696 ASXL1Q8IXJ9 1541 aa32.67■■■□□ 2.82
DDX39A-215ENST00000590696 MEX3CQ5U5Q3 659 aaKnown RBP32.67■■■□□ 2.82
DDX39A-215ENST00000590696 RPGRIP1LQ68CZ1 1315 aa32.67■■■□□ 2.82
DDX39A-215ENST00000590696 FOXD1Q16676 465 aa32.64■■■□□ 2.82
DDX39A-215ENST00000590696 NALCNQ8IZF0 1738 aa32.63■■■□□ 2.81
DDX39A-215ENST00000590696 SETD1AO15047 1707 aaKnown RBP32.62■■■□□ 2.81
DDX39A-215ENST00000590696 NHSL1Q5SYE7 1610 aa32.59■■■□□ 2.81
DDX39A-215ENST00000590696 PPLO60437 1756 aa32.59■■■□□ 2.81
DDX39A-215ENST00000590696 PTCH1Q13635 1447 aa32.59■■■□□ 2.81
DDX39A-215ENST00000590696 SETD5Q9C0A6 1442 aa32.59■■■□□ 2.81
DDX39A-215ENST00000590696 NUTM2BA6NNL0 878 aaPredicted RBP32.58■■■□□ 2.81
DDX39A-215ENST00000590696 NUTM2EB1AL46 878 aaPredicted RBP32.58■■■□□ 2.81
DDX39A-215ENST00000590696 NUTM2AQ8IVF1 878 aaPredicted RBP32.58■■■□□ 2.81
DDX39A-215ENST00000590696 ROBO2Q9HCK4 1378 aa32.58■■■□□ 2.81
DDX39A-215ENST00000590696 DDX17Q92841 729 aaKnown RBP32.57■■■□□ 2.8
DDX39A-215ENST00000590696 ZNF772Q68DY9 489 aaPredicted RBP32.56■■■□□ 2.8
DDX39A-215ENST00000590696 LRRC59Q96AG4 307 aaKnown RBP32.56■■■□□ 2.8
DDX39A-215ENST00000590696 C1orf167Q5SNV9 1468 aa32.53■■■□□ 2.8
DDX39A-215ENST00000590696 CCDC144AA2RUR9 1427 aa32.52■■■□□ 2.8
DDX39A-215ENST00000590696 MPHOSPH9Q99550 1183 aa32.52■■■□□ 2.8
DDX39A-215ENST00000590696 PRAG1Q86YV5 1406 aa32.51■■■□□ 2.79
DDX39A-215ENST00000590696 RGL3Q3MIN7 710 aa32.5■■■□□ 2.79
DDX39A-215ENST00000590696 ADGRF5Q8IZF2 1346 aa32.49■■■□□ 2.79
DDX39A-215ENST00000590696 ORAI2Q96SN7 254 aa32.46■■■□□ 2.79
DDX39A-215ENST00000590696 PNPLA6Q8IY17 1366 aa32.45■■■□□ 2.79
DDX39A-215ENST00000590696 SPATA31E1Q6ZUB1 1445 aa32.44■■■□□ 2.78
DDX39A-215ENST00000590696 AFF2P51816 1311 aa32.42■■■□□ 2.78
DDX39A-215ENST00000590696 RXRBP28702 533 aa32.4■■■□□ 2.78
DDX39A-215ENST00000590696 ANKRD30BQ9BXX2 1392 aa32.4■■■□□ 2.78
DDX39A-215ENST00000590696 LAMC1P11047 1609 aa32.4■■■□□ 2.78
DDX39A-215ENST00000590696 IFT172Q9UG01 1749 aa32.38■■■□□ 2.77
DDX39A-215ENST00000590696 STK26Q9P289 416 aa32.38■■■□□ 2.77
DDX39A-215ENST00000590696 SOS2Q07890 1332 aaPredicted RBP32.37■■■□□ 2.77
DDX39A-215ENST00000590696 C8orf37Q96NL8 207 aa32.37■■■□□ 2.77
DDX39A-215ENST00000590696 ACIN1Q9UKV3 1341 aaKnown RBP32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms