RNA–Protein interactions for RNA: ENST00000590520.5

GHDC-211, Transcript of GH3 domain containing, humanhuman

TSL 3

Gene GHDC, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-211ENST00000590520 SLC52A1Q9NWF4 448 aa23.58■■□□□ 1.37
GHDC-211ENST00000590520 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
GHDC-211ENST00000590520 MSH6P52701 1360 aa23.55■■□□□ 1.36
GHDC-211ENST00000590520 CHD2O14647 1828 aaKnown RBP23.55■■□□□ 1.36
GHDC-211ENST00000590520 ZFYVE9O95405 1425 aa23.55■■□□□ 1.36
GHDC-211ENST00000590520 PHLPP1O60346 1717 aa23.54■■□□□ 1.36
GHDC-211ENST00000590520 ANKRD50Q9ULJ7 1429 aa23.54■■□□□ 1.36
GHDC-211ENST00000590520 PLEKHG1Q9ULL1 1385 aa23.52■■□□□ 1.36
GHDC-211ENST00000590520 TMEM131LA2VDJ0 1609 aa23.52■■□□□ 1.36
GHDC-211ENST00000590520 UNC13BO14795 1591 aa23.52■■□□□ 1.36
GHDC-211ENST00000590520 RBM33Q96EV2 1170 aaKnown RBP23.51■■□□□ 1.35
GHDC-211ENST00000590520 BCANQ96GW7 911 aa23.5■■□□□ 1.35
GHDC-211ENST00000590520 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
GHDC-211ENST00000590520 DIP2AQ14689 1571 aa23.47■■□□□ 1.35
GHDC-211ENST00000590520 PPP1R15AO75807 674 aaPredicted RBP23.46■■□□□ 1.35
GHDC-211ENST00000590520 COL16A1Q07092 1604 aaPredicted RBP23.46■■□□□ 1.35
GHDC-211ENST00000590520 POTEAQ6S8J7 498 aa23.46■■□□□ 1.35
GHDC-211ENST00000590520 JCADQ9P266 1359 aa23.45■■□□□ 1.34
GHDC-211ENST00000590520 FAM50AQ14320 339 aaKnown RBP23.45■■□□□ 1.34
GHDC-211ENST00000590520 E9PCH4 1651 aa23.44■■□□□ 1.34
GHDC-211ENST00000590520 SETD1AO15047 1707 aaKnown RBP23.44■■□□□ 1.34
GHDC-211ENST00000590520 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
GHDC-211ENST00000590520 HDGFP51858 240 aaKnown RBP23.43■■□□□ 1.34
GHDC-211ENST00000590520 SLAIN2Q9P270 581 aa23.43■■□□□ 1.34
GHDC-211ENST00000590520 IQGAP3Q86VI3 1631 aa23.42■■□□□ 1.34
GHDC-211ENST00000590520 ADAMTS13Q76LX8 1427 aa23.39■■□□□ 1.33
GHDC-211ENST00000590520 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.39■■□□□ 1.33
GHDC-211ENST00000590520 AHDC1Q5TGY3 1603 aaPredicted RBP23.38■■□□□ 1.33
GHDC-211ENST00000590520 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
GHDC-211ENST00000590520 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
GHDC-211ENST00000590520 PIK3R4Q99570 1358 aa23.37■■□□□ 1.33
GHDC-211ENST00000590520 SHPRHQ149N8 1683 aa23.36■■□□□ 1.33
GHDC-211ENST00000590520 TRPM2O94759 1503 aa23.36■■□□□ 1.33
GHDC-211ENST00000590520 LRP6O75581 1613 aa23.34■■□□□ 1.33
GHDC-211ENST00000590520 CHGAP10645 457 aaKnown RBP23.34■■□□□ 1.33
GHDC-211ENST00000590520 ROCK1Q13464 1354 aa23.34■■□□□ 1.33
GHDC-211ENST00000590520 C14orf37Q86TY3 774 aa23.33■■□□□ 1.33
GHDC-211ENST00000590520 SPATA31A6Q5VVP1 1343 aa23.32■■□□□ 1.32
GHDC-211ENST00000590520 CADPS2Q86UW7 1296 aa23.31■■□□□ 1.32
GHDC-211ENST00000590520 XRN1Q8IZH2 1706 aaKnown RBP23.29■■□□□ 1.32
GHDC-211ENST00000590520 NUTM2DQ5VT03 806 aaPredicted RBP23.28■■□□□ 1.32
GHDC-211ENST00000590520 SPHKAPQ2M3C7 1700 aa23.28■■□□□ 1.32
GHDC-211ENST00000590520 DCCP43146 1447 aa23.27■■□□□ 1.32
GHDC-211ENST00000590520 NRXN3Q9Y4C0 1643 aa23.27■■□□□ 1.32
GHDC-211ENST00000590520 ATF3P18847 181 aa23.27■■□□□ 1.32
GHDC-211ENST00000590520 C19orf44Q9H6X5 657 aa23.27■■□□□ 1.32
GHDC-211ENST00000590520 SETBP1Q9Y6X0 1596 aa23.26■■□□□ 1.31
GHDC-211ENST00000590520 PTPRUQ92729 1446 aa23.25■■□□□ 1.31
GHDC-211ENST00000590520 MEX3CQ5U5Q3 659 aaKnown RBP23.25■■□□□ 1.31
GHDC-211ENST00000590520 NUP155O75694 1391 aa23.24■■□□□ 1.31
GHDC-211ENST00000590520 ZNF772Q68DY9 489 aaPredicted RBP23.23■■□□□ 1.31
GHDC-211ENST00000590520 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
GHDC-211ENST00000590520 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
GHDC-211ENST00000590520 AMOTL2Q9Y2J4 779 aa23.21■■□□□ 1.31
GHDC-211ENST00000590520 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
GHDC-211ENST00000590520 MST1RQ04912 1400 aa23.16■■□□□ 1.3
GHDC-211ENST00000590520 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
GHDC-211ENST00000590520 NALCNQ8IZF0 1738 aa23.15■■□□□ 1.3
GHDC-211ENST00000590520 CDK12Q9NYV4 1490 aaPredicted RBP23.14■■□□□ 1.29
GHDC-211ENST00000590520 TRIM52Q96A61 297 aa23.13■■□□□ 1.29
GHDC-211ENST00000590520 ADGRL3Q9HAR2 1447 aa23.13■■□□□ 1.29
GHDC-211ENST00000590520 NEXMIFQ5QGS0 1516 aa23.13■■□□□ 1.29
GHDC-211ENST00000590520 CLTCL1P53675 1640 aa23.12■■□□□ 1.29
GHDC-211ENST00000590520 ITGAEP38570 1179 aa23.1■■□□□ 1.29
GHDC-211ENST00000590520 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.29
GHDC-211ENST00000590520 METP08581 1390 aa23.1■■□□□ 1.29
GHDC-211ENST00000590520 KIF1BO60333 1816 aa23.1■■□□□ 1.29
GHDC-211ENST00000590520 NUTM2BA6NNL0 878 aaPredicted RBP23.09■■□□□ 1.29
GHDC-211ENST00000590520 NUTM2EB1AL46 878 aaPredicted RBP23.09■■□□□ 1.29
GHDC-211ENST00000590520 RXRBP28702 533 aa23.09■■□□□ 1.29
GHDC-211ENST00000590520 ZNF326Q5BKZ1 582 aaKnown RBP23.09■■□□□ 1.29
GHDC-211ENST00000590520 NUTM2AQ8IVF1 878 aaPredicted RBP23.09■■□□□ 1.29
GHDC-211ENST00000590520 AFF2P51816 1311 aa23.07■■□□□ 1.28
GHDC-211ENST00000590520 LAMC1P11047 1609 aa23.04■■□□□ 1.28
GHDC-211ENST00000590520 PNPLA6Q8IY17 1366 aa23.04■■□□□ 1.28
GHDC-211ENST00000590520 PTCH1Q13635 1447 aa23.04■■□□□ 1.28
GHDC-211ENST00000590520 LRRC59Q96AG4 307 aaKnown RBP23.03■■□□□ 1.28
GHDC-211ENST00000590520 RGS12O14924 1447 aa23.01■■□□□ 1.27
GHDC-211ENST00000590520 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
GHDC-211ENST00000590520 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
GHDC-211ENST00000590520 C8orf37Q96NL8 207 aa22.98■■□□□ 1.27
GHDC-211ENST00000590520 DDX17Q92841 729 aaKnown RBP22.96■■□□□ 1.27
GHDC-211ENST00000590520 NAIPQ13075 1403 aa22.94■■□□□ 1.26
GHDC-211ENST00000590520 RBM6P78332 1123 aaKnown RBP22.94■■□□□ 1.26
GHDC-211ENST00000590520 PPLO60437 1756 aa22.94■■□□□ 1.26
GHDC-211ENST00000590520 ROBO2Q9HCK4 1378 aa22.93■■□□□ 1.26
GHDC-211ENST00000590520 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
GHDC-211ENST00000590520 COL22A1Q8NFW1 1626 aaPredicted RBP22.92■■□□□ 1.26
GHDC-211ENST00000590520 QTRT2Q9H974 415 aaKnown RBP22.91■■□□□ 1.26
GHDC-211ENST00000590520 PPARGC1BQ86YN6 1023 aaKnown RBP22.9■■□□□ 1.26
GHDC-211ENST00000590520 HFM1A2PYH4 1435 aa22.9■■□□□ 1.26
GHDC-211ENST00000590520 CDC42BPGQ6DT37 1551 aa22.89■■□□□ 1.26
GHDC-211ENST00000590520 SOS2Q07890 1332 aaPredicted RBP22.89■■□□□ 1.26
GHDC-211ENST00000590520 VGFO15240 615 aaPredicted RBP22.89■■□□□ 1.25
GHDC-211ENST00000590520 ADAMTS2O95450 1211 aa22.88■■□□□ 1.25
GHDC-211ENST00000590520 NGLY1Q96IV0 654 aa22.87■■□□□ 1.25
GHDC-211ENST00000590520 RPGRIP1LQ68CZ1 1315 aa22.86■■□□□ 1.25
GHDC-211ENST00000590520 SRCAPQ6ZRS2 3230 aa22.86■■□□□ 1.25
GHDC-211ENST00000590520 ORAI2Q96SN7 254 aa22.85■■□□□ 1.25
GHDC-211ENST00000590520 MARF1Q9Y4F3 1742 aaKnown RBP22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms