RNA–Protein interactions for RNA: ENST00000590470.1

ZNF397-208, Transcript of zinc finger protein 397, humanhuman

TSL 3

Gene ZNF397, Length 245 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-208ENST00000590470 PRAG1Q86YV5 1406 aa13.39□□□□□ -0.27
ZNF397-208ENST00000590470 CEP170BQ9Y4F5 1589 aaPredicted RBP13.39□□□□□ -0.27
ZNF397-208ENST00000590470 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
ZNF397-208ENST00000590470 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
ZNF397-208ENST00000590470 UHRF1BP1Q6BDS2 1440 aa13.37□□□□□ -0.27
ZNF397-208ENST00000590470 RIMS2Q9UQ26 1411 aa13.37□□□□□ -0.27
ZNF397-208ENST00000590470 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
ZNF397-208ENST00000590470 ZNF142P52746 1687 aaPredicted RBP13.36□□□□□ -0.27
ZNF397-208ENST00000590470 MYOM2P54296 1465 aa13.36□□□□□ -0.27
ZNF397-208ENST00000590470 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
ZNF397-208ENST00000590470 IQGAP1P46940 1657 aa13.34□□□□□ -0.27
ZNF397-208ENST00000590470 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
ZNF397-208ENST00000590470 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
ZNF397-208ENST00000590470 ZFYVE9O95405 1425 aa13.33□□□□□ -0.28
ZNF397-208ENST00000590470 LTKP29376 864 aa13.33□□□□□ -0.28
ZNF397-208ENST00000590470 SETD1BQ9UPS6 1966 aaKnown RBP13.32□□□□□ -0.28
ZNF397-208ENST00000590470 NRXN1Q9ULB1 1477 aa13.32□□□□□ -0.28
ZNF397-208ENST00000590470 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
ZNF397-208ENST00000590470 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
ZNF397-208ENST00000590470 NRXN3Q9Y4C0 1643 aa13.31□□□□□ -0.28
ZNF397-208ENST00000590470 PIK3C2GO75747 1445 aa13.31□□□□□ -0.28
ZNF397-208ENST00000590470 VGFO15240 615 aaPredicted RBP13.31□□□□□ -0.28
ZNF397-208ENST00000590470 TMEM132EQ6IEE7 984 aa13.31□□□□□ -0.28
ZNF397-208ENST00000590470 BCANQ96GW7 911 aa13.31□□□□□ -0.28
ZNF397-208ENST00000590470 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
ZNF397-208ENST00000590470 HSPA2P54652 639 aa13.3□□□□□ -0.28
ZNF397-208ENST00000590470 TXNDC2Q86VQ3 553 aa13.3□□□□□ -0.28
ZNF397-208ENST00000590470 CARD11Q9BXL7 1154 aa13.3□□□□□ -0.28
ZNF397-208ENST00000590470 HSPA5P11021 654 aaKnown RBP13.29□□□□□ -0.28
ZNF397-208ENST00000590470 THEMISQ8N1K5 641 aaPredicted RBP13.29□□□□□ -0.28
ZNF397-208ENST00000590470 SETD1AO15047 1707 aaKnown RBP13.29□□□□□ -0.28
ZNF397-208ENST00000590470 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
ZNF397-208ENST00000590470 SLIT1O75093 1534 aa13.29□□□□□ -0.28
ZNF397-208ENST00000590470 ASXL1Q8IXJ9 1541 aa13.29□□□□□ -0.28
ZNF397-208ENST00000590470 ALKQ9UM73 1620 aa13.28□□□□□ -0.28
ZNF397-208ENST00000590470 NCKAP5LQ9HCH0 1330 aa13.27□□□□□ -0.29
ZNF397-208ENST00000590470 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
ZNF397-208ENST00000590470 LAMC1P11047 1609 aa13.26□□□□□ -0.29
ZNF397-208ENST00000590470 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.26□□□□□ -0.29
ZNF397-208ENST00000590470 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
ZNF397-208ENST00000590470 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
ZNF397-208ENST00000590470 ADGRB1O14514 1584 aa13.25□□□□□ -0.29
ZNF397-208ENST00000590470 SCAF11Q99590 1463 aaKnown RBP13.25□□□□□ -0.29
ZNF397-208ENST00000590470 USP47Q96K76 1375 aa13.25□□□□□ -0.29
ZNF397-208ENST00000590470 ZNF316A6NFI3 1004 aaPredicted RBP13.25□□□□□ -0.29
ZNF397-208ENST00000590470 STK26Q9P289 416 aa13.25□□□□□ -0.29
ZNF397-208ENST00000590470 EID1Q9Y6B2 187 aa13.25□□□□□ -0.29
ZNF397-208ENST00000590470 EIF4G2P78344 907 aaKnown RBP eCLIP13.24□□□□□ -0.29
ZNF397-208ENST00000590470 STAC3Q96MF2 364 aa13.24□□□□□ -0.29
ZNF397-208ENST00000590470 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
ZNF397-208ENST00000590470 SETBP1Q9Y6X0 1596 aa13.24□□□□□ -0.29
ZNF397-208ENST00000590470 LMTK3Q96Q04 1460 aa13.23□□□□□ -0.29
ZNF397-208ENST00000590470 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
ZNF397-208ENST00000590470 ADAMTS13Q76LX8 1427 aa13.22□□□□□ -0.29
ZNF397-208ENST00000590470 METP08581 1390 aa13.22□□□□□ -0.29
ZNF397-208ENST00000590470 PLEKHG1Q9ULL1 1385 aa13.22□□□□□ -0.29
ZNF397-208ENST00000590470 ST20-MTHFSA0A0A6YYL1 179 aa13.22□□□□□ -0.29
ZNF397-208ENST00000590470 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
ZNF397-208ENST00000590470 ARHGEF28Q8N1W1 1705 aaKnown RBP13.22□□□□□ -0.29
ZNF397-208ENST00000590470 C11orf95C9JLR9 678 aaPredicted RBP13.21□□□□□ -0.29
ZNF397-208ENST00000590470 ANKLE2Q86XL3 938 aa13.21□□□□□ -0.29
ZNF397-208ENST00000590470 STRCQ7RTU9 1775 aa13.2□□□□□ -0.3
ZNF397-208ENST00000590470 QRICH2Q9H0J4 1663 aa13.19□□□□□ -0.3
ZNF397-208ENST00000590470 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.3
ZNF397-208ENST00000590470 POLR3GLQ9BT43 218 aa13.18□□□□□ -0.3
ZNF397-208ENST00000590470 NPHP4O75161 1426 aaPredicted RBP13.18□□□□□ -0.3
ZNF397-208ENST00000590470 PTPRUQ92729 1446 aa13.18□□□□□ -0.3
ZNF397-208ENST00000590470 YTHDC2Q9H6S0 1430 aaKnown RBP13.18□□□□□ -0.3
ZNF397-208ENST00000590470 MED14O60244 1454 aa13.17□□□□□ -0.3
ZNF397-208ENST00000590470 WAPLQ7Z5K2 1190 aa13.15□□□□□ -0.3
ZNF397-208ENST00000590470 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
ZNF397-208ENST00000590470 KNDC1Q76NI1 1749 aa13.14□□□□□ -0.31
ZNF397-208ENST00000590470 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
ZNF397-208ENST00000590470 DISP3Q9P2K9 1392 aa13.14□□□□□ -0.31
ZNF397-208ENST00000590470 WASHC2AQ641Q2 1341 aa13.13□□□□□ -0.31
ZNF397-208ENST00000590470 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
ZNF397-208ENST00000590470 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
ZNF397-208ENST00000590470 RBM33Q96EV2 1170 aaKnown RBP13.13□□□□□ -0.31
ZNF397-208ENST00000590470 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
ZNF397-208ENST00000590470 TESK2Q96S53 571 aa13.13□□□□□ -0.31
ZNF397-208ENST00000590470 AMOTL2Q9Y2J4 779 aa13.13□□□□□ -0.31
ZNF397-208ENST00000590470 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
ZNF397-208ENST00000590470 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
ZNF397-208ENST00000590470 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
ZNF397-208ENST00000590470 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
ZNF397-208ENST00000590470 XRN1Q8IZH2 1706 aaKnown RBP13.12□□□□□ -0.31
ZNF397-208ENST00000590470 KIF7Q2M1P5 1343 aa13.12□□□□□ -0.31
ZNF397-208ENST00000590470 EIF3AQ14152 1382 aaKnown RBP13.11□□□□□ -0.31
ZNF397-208ENST00000590470 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
ZNF397-208ENST00000590470 DDX10Q13206 875 aaKnown RBP13.11□□□□□ -0.31
ZNF397-208ENST00000590470 POGKQ9P215 609 aa13.11□□□□□ -0.31
ZNF397-208ENST00000590470 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
ZNF397-208ENST00000590470 CCDC7Q96M83 1385 aa13.1□□□□□ -0.31
ZNF397-208ENST00000590470 CPS1P31327 1500 aa13.1□□□□□ -0.31
ZNF397-208ENST00000590470 ABCC11Q96J66 1382 aa13.09□□□□□ -0.31
ZNF397-208ENST00000590470 DLC1Q96QB1 1528 aa13.09□□□□□ -0.31
ZNF397-208ENST00000590470 KCNA6P17658 529 aa13.09□□□□□ -0.31
ZNF397-208ENST00000590470 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.31
ZNF397-208ENST00000590470 TMF1P82094 1093 aa13.06□□□□□ -0.32
ZNF397-208ENST00000590470 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms