RNA–Protein interactions for RNA: ENST00000590422.1

CTIF-208, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 3

Gene CTIF, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-208ENST00000590422 SLC52A1Q9NWF4 448 aa18.72■□□□□ 0.59
CTIF-208ENST00000590422 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
CTIF-208ENST00000590422 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
CTIF-208ENST00000590422 KCNA6P17658 529 aa18.7■□□□□ 0.58
CTIF-208ENST00000590422 RBM33Q96EV2 1170 aaKnown RBP18.7■□□□□ 0.58
CTIF-208ENST00000590422 NKTRP30414 1462 aaKnown RBP18.7■□□□□ 0.58
CTIF-208ENST00000590422 RIMS2Q9UQ26 1411 aa18.68■□□□□ 0.58
CTIF-208ENST00000590422 ROBO1Q9Y6N7 1651 aa18.67■□□□□ 0.58
CTIF-208ENST00000590422 CHD2O14647 1828 aaKnown RBP18.67■□□□□ 0.58
CTIF-208ENST00000590422 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
CTIF-208ENST00000590422 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
CTIF-208ENST00000590422 PPARGC1BQ86YN6 1023 aaKnown RBP18.65■□□□□ 0.58
CTIF-208ENST00000590422 PROSER2Q86WR7 435 aaPredicted RBP18.64■□□□□ 0.57
CTIF-208ENST00000590422 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
CTIF-208ENST00000590422 ITGAEP38570 1179 aa18.63■□□□□ 0.57
CTIF-208ENST00000590422 BCANQ96GW7 911 aa18.63■□□□□ 0.57
CTIF-208ENST00000590422 ADAMTS13Q76LX8 1427 aa18.61■□□□□ 0.57
CTIF-208ENST00000590422 NUP155O75694 1391 aa18.61■□□□□ 0.57
CTIF-208ENST00000590422 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
CTIF-208ENST00000590422 CHGAP10645 457 aaKnown RBP18.6■□□□□ 0.57
CTIF-208ENST00000590422 NUTM2DQ5VT03 806 aaPredicted RBP18.6■□□□□ 0.57
CTIF-208ENST00000590422 MSH6P52701 1360 aa18.58■□□□□ 0.57
CTIF-208ENST00000590422 SPHKAPQ2M3C7 1700 aa18.58■□□□□ 0.57
CTIF-208ENST00000590422 DIP2AQ14689 1571 aa18.58■□□□□ 0.56
CTIF-208ENST00000590422 RGS17Q9UGC6 210 aaPredicted RBP18.57■□□□□ 0.56
CTIF-208ENST00000590422 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
CTIF-208ENST00000590422 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
CTIF-208ENST00000590422 TBX22Q9Y458 520 aa18.55■□□□□ 0.56
CTIF-208ENST00000590422 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.54■□□□□ 0.56
CTIF-208ENST00000590422 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
CTIF-208ENST00000590422 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.52■□□□□ 0.56
CTIF-208ENST00000590422 PTPRUQ92729 1446 aa18.52■□□□□ 0.56
CTIF-208ENST00000590422 SLAIN2Q9P270 581 aa18.52■□□□□ 0.56
CTIF-208ENST00000590422 TRPM2O94759 1503 aa18.52■□□□□ 0.56
CTIF-208ENST00000590422 RRBP1Q9P2E9 1410 aaKnown RBP18.51■□□□□ 0.55
CTIF-208ENST00000590422 CLTCL1P53675 1640 aa18.51■□□□□ 0.55
CTIF-208ENST00000590422 COL16A1Q07092 1604 aaPredicted RBP18.51■□□□□ 0.55
CTIF-208ENST00000590422 XRN1Q8IZH2 1706 aaKnown RBP18.5■□□□□ 0.55
CTIF-208ENST00000590422 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
CTIF-208ENST00000590422 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
CTIF-208ENST00000590422 NCOA3Q9Y6Q9 1424 aa18.49■□□□□ 0.55
CTIF-208ENST00000590422 NAIPQ13075 1403 aa18.48■□□□□ 0.55
CTIF-208ENST00000590422 NEXMIFQ5QGS0 1516 aa18.46■□□□□ 0.55
CTIF-208ENST00000590422 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
CTIF-208ENST00000590422 AHDC1Q5TGY3 1603 aaPredicted RBP18.45■□□□□ 0.54
CTIF-208ENST00000590422 POTEAQ6S8J7 498 aa18.44■□□□□ 0.54
CTIF-208ENST00000590422 AMOTL2Q9Y2J4 779 aa18.44■□□□□ 0.54
CTIF-208ENST00000590422 JCADQ9P266 1359 aa18.43■□□□□ 0.54
CTIF-208ENST00000590422 METP08581 1390 aa18.42■□□□□ 0.54
CTIF-208ENST00000590422 LRP6O75581 1613 aa18.42■□□□□ 0.54
CTIF-208ENST00000590422 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
CTIF-208ENST00000590422 KIF1BO60333 1816 aa18.42■□□□□ 0.54
CTIF-208ENST00000590422 ZNF326Q5BKZ1 582 aaKnown RBP18.41■□□□□ 0.54
CTIF-208ENST00000590422 CADPS2Q86UW7 1296 aa18.41■□□□□ 0.54
CTIF-208ENST00000590422 SETD1AO15047 1707 aaKnown RBP18.4■□□□□ 0.54
CTIF-208ENST00000590422 SHPRHQ149N8 1683 aa18.39■□□□□ 0.53
CTIF-208ENST00000590422 ATF3P18847 181 aa18.39■□□□□ 0.53
CTIF-208ENST00000590422 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
CTIF-208ENST00000590422 HFM1A2PYH4 1435 aa18.39■□□□□ 0.53
CTIF-208ENST00000590422 DCCP43146 1447 aa18.39■□□□□ 0.53
CTIF-208ENST00000590422 ASXL1Q8IXJ9 1541 aa18.38■□□□□ 0.53
CTIF-208ENST00000590422 MST1RQ04912 1400 aa18.36■□□□□ 0.53
CTIF-208ENST00000590422 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
CTIF-208ENST00000590422 NHSL1Q5SYE7 1610 aa18.34■□□□□ 0.53
CTIF-208ENST00000590422 ADGRL3Q9HAR2 1447 aa18.34■□□□□ 0.53
CTIF-208ENST00000590422 PPLO60437 1756 aa18.32■□□□□ 0.52
CTIF-208ENST00000590422 SPATA31A6Q5VVP1 1343 aa18.32■□□□□ 0.52
CTIF-208ENST00000590422 TRIM52Q96A61 297 aa18.31■□□□□ 0.52
CTIF-208ENST00000590422 PTCH1Q13635 1447 aa18.29■□□□□ 0.52
CTIF-208ENST00000590422 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
CTIF-208ENST00000590422 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
CTIF-208ENST00000590422 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
CTIF-208ENST00000590422 DDX17Q92841 729 aaKnown RBP18.27■□□□□ 0.52
CTIF-208ENST00000590422 PRAG1Q86YV5 1406 aa18.26■□□□□ 0.51
CTIF-208ENST00000590422 FOXD1Q16676 465 aa18.26■□□□□ 0.51
CTIF-208ENST00000590422 MEX3CQ5U5Q3 659 aaKnown RBP18.26■□□□□ 0.51
CTIF-208ENST00000590422 NUTM2BA6NNL0 878 aaPredicted RBP18.24■□□□□ 0.51
CTIF-208ENST00000590422 NUTM2EB1AL46 878 aaPredicted RBP18.24■□□□□ 0.51
CTIF-208ENST00000590422 NUTM2AQ8IVF1 878 aaPredicted RBP18.24■□□□□ 0.51
CTIF-208ENST00000590422 C1orf167Q5SNV9 1468 aa18.24■□□□□ 0.51
CTIF-208ENST00000590422 LAMC1P11047 1609 aa18.23■□□□□ 0.51
CTIF-208ENST00000590422 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
CTIF-208ENST00000590422 IFT172Q9UG01 1749 aa18.23■□□□□ 0.51
CTIF-208ENST00000590422 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
CTIF-208ENST00000590422 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
CTIF-208ENST00000590422 ZNF772Q68DY9 489 aaPredicted RBP18.2■□□□□ 0.5
CTIF-208ENST00000590422 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
CTIF-208ENST00000590422 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
CTIF-208ENST00000590422 AFF2P51816 1311 aa18.18■□□□□ 0.5
CTIF-208ENST00000590422 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
CTIF-208ENST00000590422 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
CTIF-208ENST00000590422 LRRC59Q96AG4 307 aaKnown RBP18.17■□□□□ 0.5
CTIF-208ENST00000590422 ORAI2Q96SN7 254 aa18.17■□□□□ 0.5
CTIF-208ENST00000590422 MPHOSPH9Q99550 1183 aa18.14■□□□□ 0.49
CTIF-208ENST00000590422 KNDC1Q76NI1 1749 aa18.14■□□□□ 0.49
CTIF-208ENST00000590422 RGL3Q3MIN7 710 aa18.13■□□□□ 0.49
CTIF-208ENST00000590422 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
CTIF-208ENST00000590422 SOS2Q07890 1332 aaPredicted RBP18.13■□□□□ 0.49
CTIF-208ENST00000590422 TECPR2O15040 1411 aa18.13■□□□□ 0.49
CTIF-208ENST00000590422 CDK12Q9NYV4 1490 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms