RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.59
DDX39A-213ENST00000590315 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
DDX39A-213ENST00000590315 NEURL4Q96JN8 1562 aa18.71■□□□□ 0.59
DDX39A-213ENST00000590315 NCKAP5LQ9HCH0 1330 aa18.71■□□□□ 0.59
DDX39A-213ENST00000590315 ARHGAP23Q9P227 1491 aa18.71■□□□□ 0.59
DDX39A-213ENST00000590315 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
DDX39A-213ENST00000590315 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
DDX39A-213ENST00000590315 ANKLE2Q86XL3 938 aa18.7■□□□□ 0.58
DDX39A-213ENST00000590315 TXNDC2Q86VQ3 553 aa18.69■□□□□ 0.58
DDX39A-213ENST00000590315 BCANQ96GW7 911 aa18.69■□□□□ 0.58
DDX39A-213ENST00000590315 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
DDX39A-213ENST00000590315 SIN3AQ96ST3 1273 aa18.67■□□□□ 0.58
DDX39A-213ENST00000590315 ZFYVE9O95405 1425 aa18.66■□□□□ 0.58
DDX39A-213ENST00000590315 SPATA31E1Q6ZUB1 1445 aa18.66■□□□□ 0.58
DDX39A-213ENST00000590315 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
DDX39A-213ENST00000590315 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
DDX39A-213ENST00000590315 LTKP29376 864 aa18.63■□□□□ 0.57
DDX39A-213ENST00000590315 RPGRIP1LQ68CZ1 1315 aa18.61■□□□□ 0.57
DDX39A-213ENST00000590315 MED14O60244 1454 aa18.6■□□□□ 0.57
DDX39A-213ENST00000590315 DMRT2Q9Y5R5 561 aa18.6■□□□□ 0.57
DDX39A-213ENST00000590315 NRXN3Q9Y4C0 1643 aa18.6■□□□□ 0.57
DDX39A-213ENST00000590315 TONSLQ96HA7 1378 aa18.59■□□□□ 0.57
DDX39A-213ENST00000590315 KDM2AQ9Y2K7 1162 aa18.59■□□□□ 0.57
DDX39A-213ENST00000590315 PLEKHG1Q9ULL1 1385 aa18.58■□□□□ 0.57
DDX39A-213ENST00000590315 DCAF11Q8TEB1 546 aa18.58■□□□□ 0.56
DDX39A-213ENST00000590315 LAMC1P11047 1609 aa18.57■□□□□ 0.56
DDX39A-213ENST00000590315 DIP2AQ14689 1571 aa18.57■□□□□ 0.56
DDX39A-213ENST00000590315 SETBP1Q9Y6X0 1596 aa18.57■□□□□ 0.56
DDX39A-213ENST00000590315 VGFO15240 615 aaPredicted RBP18.57■□□□□ 0.56
DDX39A-213ENST00000590315 MYOM2P54296 1465 aa18.57■□□□□ 0.56
DDX39A-213ENST00000590315 CLSPNQ9HAW4 1339 aa18.55■□□□□ 0.56
DDX39A-213ENST00000590315 SETD1AO15047 1707 aaKnown RBP18.55■□□□□ 0.56
DDX39A-213ENST00000590315 SLC26A8Q96RN1 970 aa18.55■□□□□ 0.56
DDX39A-213ENST00000590315 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
DDX39A-213ENST00000590315 ADGRF5Q8IZF2 1346 aa18.53■□□□□ 0.56
DDX39A-213ENST00000590315 ALKQ9UM73 1620 aa18.52■□□□□ 0.56
DDX39A-213ENST00000590315 STRCP1A6NGW2 1772 aa18.52■□□□□ 0.55
DDX39A-213ENST00000590315 L3MBTL2Q969R5 705 aa18.51■□□□□ 0.55
DDX39A-213ENST00000590315 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
DDX39A-213ENST00000590315 ADAMTS13Q76LX8 1427 aa18.49■□□□□ 0.55
DDX39A-213ENST00000590315 KIAA1210Q9ULL0 1709 aa18.49■□□□□ 0.55
DDX39A-213ENST00000590315 NRXN1Q9ULB1 1477 aa18.47■□□□□ 0.55
DDX39A-213ENST00000590315 TRPM1Q7Z4N2 1603 aa18.47■□□□□ 0.55
DDX39A-213ENST00000590315 ZNF335Q9H4Z2 1342 aaPredicted RBP18.46■□□□□ 0.55
DDX39A-213ENST00000590315 NWD1Q149M9 1564 aa18.45■□□□□ 0.54
DDX39A-213ENST00000590315 XRN1Q8IZH2 1706 aaKnown RBP18.44■□□□□ 0.54
DDX39A-213ENST00000590315 PRAG1Q86YV5 1406 aa18.44■□□□□ 0.54
DDX39A-213ENST00000590315 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
DDX39A-213ENST00000590315 TBX22Q9Y458 520 aa18.44■□□□□ 0.54
DDX39A-213ENST00000590315 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
DDX39A-213ENST00000590315 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
DDX39A-213ENST00000590315 CFAP70Q5T0N1 1121 aa18.42■□□□□ 0.54
DDX39A-213ENST00000590315 METP08581 1390 aa18.42■□□□□ 0.54
DDX39A-213ENST00000590315 XIRP1Q702N8 1843 aaKnown RBP18.41■□□□□ 0.54
DDX39A-213ENST00000590315 CPS1P31327 1500 aa18.4■□□□□ 0.54
DDX39A-213ENST00000590315 PIK3R4Q99570 1358 aa18.4■□□□□ 0.54
DDX39A-213ENST00000590315 TMEM132EQ6IEE7 984 aa18.39■□□□□ 0.53
DDX39A-213ENST00000590315 STK26Q9P289 416 aa18.39■□□□□ 0.53
DDX39A-213ENST00000590315 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.53
DDX39A-213ENST00000590315 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
DDX39A-213ENST00000590315 C14orf93Q9H972 538 aaKnown RBP18.38■□□□□ 0.53
DDX39A-213ENST00000590315 PTPRUQ92729 1446 aa18.38■□□□□ 0.53
DDX39A-213ENST00000590315 ARHGEF28Q8N1W1 1705 aaKnown RBP18.37■□□□□ 0.53
DDX39A-213ENST00000590315 KCNA6P17658 529 aa18.37■□□□□ 0.53
DDX39A-213ENST00000590315 AMOTL2Q9Y2J4 779 aa18.36■□□□□ 0.53
DDX39A-213ENST00000590315 ADGRB1O14514 1584 aa18.35■□□□□ 0.53
DDX39A-213ENST00000590315 YTHDC2Q9H6S0 1430 aaKnown RBP18.35■□□□□ 0.53
DDX39A-213ENST00000590315 ROCK2O75116 1388 aaKnown RBP18.35■□□□□ 0.53
DDX39A-213ENST00000590315 TIMELESSQ9UNS1 1208 aa18.35■□□□□ 0.53
DDX39A-213ENST00000590315 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
DDX39A-213ENST00000590315 PROSER2Q86WR7 435 aaPredicted RBP18.34■□□□□ 0.53
DDX39A-213ENST00000590315 NALCNQ8IZF0 1738 aa18.34■□□□□ 0.53
DDX39A-213ENST00000590315 RALGAPBQ86X10 1494 aa18.33■□□□□ 0.53
DDX39A-213ENST00000590315 C14orf37Q86TY3 774 aa18.33■□□□□ 0.52
DDX39A-213ENST00000590315 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
DDX39A-213ENST00000590315 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
DDX39A-213ENST00000590315 QRICH2Q9H0J4 1663 aa18.31■□□□□ 0.52
DDX39A-213ENST00000590315 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
DDX39A-213ENST00000590315 RBM33Q96EV2 1170 aaKnown RBP18.31■□□□□ 0.52
DDX39A-213ENST00000590315 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
DDX39A-213ENST00000590315 PTCH1Q13635 1447 aa18.3■□□□□ 0.52
DDX39A-213ENST00000590315 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
DDX39A-213ENST00000590315 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-213ENST00000590315 ROBO2Q9HCK4 1378 aa18.28■□□□□ 0.52
DDX39A-213ENST00000590315 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
DDX39A-213ENST00000590315 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDX39A-213ENST00000590315 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
DDX39A-213ENST00000590315 POGKQ9P215 609 aa18.27■□□□□ 0.52
DDX39A-213ENST00000590315 TECPR2O15040 1411 aa18.26■□□□□ 0.51
DDX39A-213ENST00000590315 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
DDX39A-213ENST00000590315 ABCC11Q96J66 1382 aa18.26■□□□□ 0.51
DDX39A-213ENST00000590315 MSH6P52701 1360 aa18.24■□□□□ 0.51
DDX39A-213ENST00000590315 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
DDX39A-213ENST00000590315 PLEKHH1Q9ULM0 1364 aa18.23■□□□□ 0.51
DDX39A-213ENST00000590315 WAPLQ7Z5K2 1190 aa18.23■□□□□ 0.51
DDX39A-213ENST00000590315 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
DDX39A-213ENST00000590315 IQSEC2Q5JU85 1478 aa18.22■□□□□ 0.51
DDX39A-213ENST00000590315 FAM135BQ49AJ0 1406 aa18.22■□□□□ 0.51
DDX39A-213ENST00000590315 RGPD8O14715 1765 aaPredicted RBP18.21■□□□□ 0.51
DDX39A-213ENST00000590315 ADGRL3Q9HAR2 1447 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms