RNA–Protein interactions for RNA: ENST00000590205.2

CACNA1A-210, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-210ENST00000590205 HIRIP3Q9BW71 556 aaPredicted RBP11.47□□□□□ -0.57
CACNA1A-210ENST00000590205 EFCAB6Q5THR3 1501 aa11.46□□□□□ -0.57
CACNA1A-210ENST00000590205 PRAG1Q86YV5 1406 aa11.46□□□□□ -0.57
CACNA1A-210ENST00000590205 FKBP8Q14318 412 aa11.46□□□□□ -0.58
CACNA1A-210ENST00000590205 NPATQ14207 1427 aa11.45□□□□□ -0.58
CACNA1A-210ENST00000590205 ARHGAP31Q2M1Z3 1444 aa11.45□□□□□ -0.58
CACNA1A-210ENST00000590205 MYOM1P52179 1685 aa11.45□□□□□ -0.58
CACNA1A-210ENST00000590205 USP47Q96K76 1375 aa11.45□□□□□ -0.58
CACNA1A-210ENST00000590205 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
CACNA1A-210ENST00000590205 FANCIQ9NVI1 1328 aa11.44□□□□□ -0.58
CACNA1A-210ENST00000590205 CCDC184Q52MB2 194 aa11.43□□□□□ -0.58
CACNA1A-210ENST00000590205 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
CACNA1A-210ENST00000590205 SYNMO15061 1565 aa11.43□□□□□ -0.58
CACNA1A-210ENST00000590205 PIK3C2BO00750 1634 aa11.43□□□□□ -0.58
CACNA1A-210ENST00000590205 ZMYM3Q14202 1370 aa11.42□□□□□ -0.58
CACNA1A-210ENST00000590205 TRPM2O94759 1503 aa11.42□□□□□ -0.58
CACNA1A-210ENST00000590205 KIF3BO15066 747 aa11.41□□□□□ -0.58
CACNA1A-210ENST00000590205 ANP32EQ9BTT0 268 aa11.41□□□□□ -0.58
CACNA1A-210ENST00000590205 MYT1LQ9UL68 1186 aa11.41□□□□□ -0.58
CACNA1A-210ENST00000590205 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.59
CACNA1A-210ENST00000590205 PARD3Q8TEW0 1356 aa11.4□□□□□ -0.59
CACNA1A-210ENST00000590205 TRIM52Q96A61 297 aa11.39□□□□□ -0.59
CACNA1A-210ENST00000590205 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
CACNA1A-210ENST00000590205 UBR1Q8IWV7 1749 aa11.39□□□□□ -0.59
CACNA1A-210ENST00000590205 ERVK-7P63135 1459 aa11.39□□□□□ -0.59
CACNA1A-210ENST00000590205 FOXD1Q16676 465 aa11.39□□□□□ -0.59
CACNA1A-210ENST00000590205 RBM19Q9Y4C8 960 aaKnown RBP11.39□□□□□ -0.59
CACNA1A-210ENST00000590205 BRD4O60885 1362 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-210ENST00000590205 MLECQ14165 292 aa11.38□□□□□ -0.59
CACNA1A-210ENST00000590205 PTPRTO14522 1441 aa11.38□□□□□ -0.59
CACNA1A-210ENST00000590205 CEP170BQ9Y4F5 1589 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-210ENST00000590205 BLMP54132 1417 aaPredicted RBP11.38□□□□□ -0.59
CACNA1A-210ENST00000590205 NOS1P29475 1434 aa11.37□□□□□ -0.59
CACNA1A-210ENST00000590205 GGT6Q6P531 493 aa11.37□□□□□ -0.59
CACNA1A-210ENST00000590205 CFAP65Q6ZU64 1925 aaKnown RBP11.35□□□□□ -0.59
CACNA1A-210ENST00000590205 WASHC2CQ9Y4E1 1318 aa11.35□□□□□ -0.59
CACNA1A-210ENST00000590205 PPP4R2Q9NY27 417 aa11.35□□□□□ -0.59
CACNA1A-210ENST00000590205 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
CACNA1A-210ENST00000590205 MYO5BQ9ULV0 1848 aa11.35□□□□□ -0.59
CACNA1A-210ENST00000590205 PKD2Q13563 968 aa11.34□□□□□ -0.59
CACNA1A-210ENST00000590205 PNISRQ8TF01 805 aaKnown RBP11.34□□□□□ -0.59
CACNA1A-210ENST00000590205 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
CACNA1A-210ENST00000590205 CEBPAP49715 358 aaPredicted RBP11.34□□□□□ -0.59
CACNA1A-210ENST00000590205 A2ML1A8K2U0 1454 aa11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 NRXN1Q9ULB1 1477 aa11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 NUP155O75694 1391 aa11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 NEFLP07196 543 aa11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 HNRNPUQ00839 825 aaKnown RBP eCLIP11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 PODXL2Q9NZ53 605 aa11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 TMEM131LA2VDJ0 1609 aa11.33□□□□□ -0.6
CACNA1A-210ENST00000590205 KANK1Q14678 1352 aa11.32□□□□□ -0.6
CACNA1A-210ENST00000590205 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
CACNA1A-210ENST00000590205 PER1O15534 1290 aaPredicted RBP11.31□□□□□ -0.6
CACNA1A-210ENST00000590205 MYOM2P54296 1465 aa11.3□□□□□ -0.6
CACNA1A-210ENST00000590205 MSH5O43196 834 aa11.3□□□□□ -0.6
CACNA1A-210ENST00000590205 ADGRB3O60242 1522 aa11.3□□□□□ -0.6
CACNA1A-210ENST00000590205 SLIT1O75093 1534 aa11.3□□□□□ -0.6
CACNA1A-210ENST00000590205 SETBP1Q9Y6X0 1596 aa11.3□□□□□ -0.6
CACNA1A-210ENST00000590205 TNRQ92752 1358 aa11.29□□□□□ -0.6
CACNA1A-210ENST00000590205 RALBP1Q15311 655 aa11.29□□□□□ -0.6
CACNA1A-210ENST00000590205 FBXO31Q5XUX0 539 aaPredicted RBP11.29□□□□□ -0.6
CACNA1A-210ENST00000590205 ARHGAP23Q9P227 1491 aa11.29□□□□□ -0.6
CACNA1A-210ENST00000590205 NUDCQ9Y266 331 aa11.29□□□□□ -0.6
CACNA1A-210ENST00000590205 UGGT1Q9NYU2 1555 aa11.28□□□□□ -0.6
CACNA1A-210ENST00000590205 MYBBP1AQ9BQG0 1328 aaKnown RBP11.28□□□□□ -0.6
CACNA1A-210ENST00000590205 CCDC144AA2RUR9 1427 aa11.27□□□□□ -0.6
CACNA1A-210ENST00000590205 TESK2Q96S53 571 aa11.27□□□□□ -0.6
CACNA1A-210ENST00000590205 KIF1BO60333 1816 aa11.27□□□□□ -0.61
CACNA1A-210ENST00000590205 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
CACNA1A-210ENST00000590205 MRS2Q9HD23 443 aa11.27□□□□□ -0.61
CACNA1A-210ENST00000590205 VIRMAQ69YN4 1812 aaKnown RBP11.27□□□□□ -0.61
CACNA1A-210ENST00000590205 PPLO60437 1756 aa11.26□□□□□ -0.61
CACNA1A-210ENST00000590205 ESF1Q9H501 851 aaKnown RBP11.26□□□□□ -0.61
CACNA1A-210ENST00000590205 LTBP4Q8N2S1 1624 aa11.26□□□□□ -0.61
CACNA1A-210ENST00000590205 MED14O60244 1454 aa11.25□□□□□ -0.61
CACNA1A-210ENST00000590205 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
CACNA1A-210ENST00000590205 STAC3Q96MF2 364 aa11.25□□□□□ -0.61
CACNA1A-210ENST00000590205 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
CACNA1A-210ENST00000590205 SHPRHQ149N8 1683 aa11.23□□□□□ -0.61
CACNA1A-210ENST00000590205 BCANQ96GW7 911 aa11.23□□□□□ -0.61
CACNA1A-210ENST00000590205 ZFYVE9O95405 1425 aa11.23□□□□□ -0.61
CACNA1A-210ENST00000590205 SETD1AO15047 1707 aaKnown RBP11.22□□□□□ -0.61
CACNA1A-210ENST00000590205 DISP3Q9P2K9 1392 aa11.21□□□□□ -0.61
CACNA1A-210ENST00000590205 NRXN3Q9Y4C0 1643 aa11.21□□□□□ -0.61
CACNA1A-210ENST00000590205 PDE3BQ13370 1112 aa11.21□□□□□ -0.62
CACNA1A-210ENST00000590205 NEXMIFQ5QGS0 1516 aa11.21□□□□□ -0.62
CACNA1A-210ENST00000590205 PIK3C2GO75747 1445 aa11.21□□□□□ -0.62
CACNA1A-210ENST00000590205 SCAF11Q99590 1463 aaKnown RBP11.2□□□□□ -0.62
CACNA1A-210ENST00000590205 STRCP1A6NGW2 1772 aa11.2□□□□□ -0.62
CACNA1A-210ENST00000590205 ST20-MTHFSA0A0A6YYL1 179 aa11.19□□□□□ -0.62
CACNA1A-210ENST00000590205 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
CACNA1A-210ENST00000590205 CARD11Q9BXL7 1154 aa11.19□□□□□ -0.62
CACNA1A-210ENST00000590205 IDI1Q13907 227 aa11.19□□□□□ -0.62
CACNA1A-210ENST00000590205 ASXL1Q8IXJ9 1541 aa11.18□□□□□ -0.62
CACNA1A-210ENST00000590205 SBNO2Q9Y2G9 1366 aa11.18□□□□□ -0.62
CACNA1A-210ENST00000590205 ARXQ96QS3 562 aa11.18□□□□□ -0.62
CACNA1A-210ENST00000590205 TMEM2Q9UHN6 1383 aa11.17□□□□□ -0.62
CACNA1A-210ENST00000590205 ZNF521Q96K83 1311 aa11.17□□□□□ -0.62
CACNA1A-210ENST00000590205 HSPA2P54652 639 aa11.17□□□□□ -0.62
CACNA1A-210ENST00000590205 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms