RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 RBM33Q96EV2 1170 aaKnown RBP27.44■■□□□ 1.98
PRKCSH-211ENST00000590098 MED1Q15648 1581 aaPredicted RBP27.43■■□□□ 1.98
PRKCSH-211ENST00000590098 HDGFP51858 240 aaKnown RBP27.43■■□□□ 1.98
PRKCSH-211ENST00000590098 E9PCH4 1651 aa27.41■■□□□ 1.98
PRKCSH-211ENST00000590098 PPP1R15AO75807 674 aaPredicted RBP27.41■■□□□ 1.98
PRKCSH-211ENST00000590098 IQGAP3Q86VI3 1631 aa27.41■■□□□ 1.98
PRKCSH-211ENST00000590098 CHGAP10645 457 aaKnown RBP27.4■■□□□ 1.98
PRKCSH-211ENST00000590098 NUP155O75694 1391 aa27.39■■□□□ 1.98
PRKCSH-211ENST00000590098 TMEM94Q12767 1356 aa27.39■■□□□ 1.98
PRKCSH-211ENST00000590098 TMEM131LA2VDJ0 1609 aa27.39■■□□□ 1.98
PRKCSH-211ENST00000590098 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
PRKCSH-211ENST00000590098 RIMS2Q9UQ26 1411 aa27.38■■□□□ 1.97
PRKCSH-211ENST00000590098 ZFYVE9O95405 1425 aa27.37■■□□□ 1.97
PRKCSH-211ENST00000590098 PLEKHG1Q9ULL1 1385 aa27.35■■□□□ 1.97
PRKCSH-211ENST00000590098 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.34■■□□□ 1.97
PRKCSH-211ENST00000590098 NKTRP30414 1462 aaKnown RBP27.33■■□□□ 1.97
PRKCSH-211ENST00000590098 NWD1Q149M9 1564 aa27.32■■□□□ 1.96
PRKCSH-211ENST00000590098 NUTM2DQ5VT03 806 aaPredicted RBP27.31■■□□□ 1.96
PRKCSH-211ENST00000590098 PHF23Q9BUL5 403 aaPredicted RBP27.3■■□□□ 1.96
PRKCSH-211ENST00000590098 CHD2O14647 1828 aaKnown RBP27.29■■□□□ 1.96
PRKCSH-211ENST00000590098 FAM135BQ49AJ0 1406 aa27.28■■□□□ 1.96
PRKCSH-211ENST00000590098 TBX22Q9Y458 520 aa27.27■■□□□ 1.96
PRKCSH-211ENST00000590098 MSH6P52701 1360 aa27.25■■□□□ 1.95
PRKCSH-211ENST00000590098 RGS17Q9UGC6 210 aaPredicted RBP27.22■■□□□ 1.95
PRKCSH-211ENST00000590098 RRBP1Q9P2E9 1410 aaKnown RBP27.22■■□□□ 1.95
PRKCSH-211ENST00000590098 SPHKAPQ2M3C7 1700 aa27.21■■□□□ 1.95
PRKCSH-211ENST00000590098 ROBO1Q9Y6N7 1651 aa27.21■■□□□ 1.95
PRKCSH-211ENST00000590098 DIP2AQ14689 1571 aa27.19■■□□□ 1.94
PRKCSH-211ENST00000590098 ADAMTS13Q76LX8 1427 aa27.19■■□□□ 1.94
PRKCSH-211ENST00000590098 SLAIN2Q9P270 581 aa27.18■■□□□ 1.94
PRKCSH-211ENST00000590098 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
PRKCSH-211ENST00000590098 PIK3R4Q99570 1358 aa27.16■■□□□ 1.94
PRKCSH-211ENST00000590098 ZNF326Q5BKZ1 582 aaKnown RBP27.14■■□□□ 1.94
PRKCSH-211ENST00000590098 NCOA3Q9Y6Q9 1424 aa27.14■■□□□ 1.93
PRKCSH-211ENST00000590098 TRPM2O94759 1503 aa27.13■■□□□ 1.93
PRKCSH-211ENST00000590098 NAIPQ13075 1403 aa27.13■■□□□ 1.93
PRKCSH-211ENST00000590098 AMOTL2Q9Y2J4 779 aa27.09■■□□□ 1.93
PRKCSH-211ENST00000590098 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
PRKCSH-211ENST00000590098 TRIM52Q96A61 297 aa27.07■■□□□ 1.92
PRKCSH-211ENST00000590098 C19orf44Q9H6X5 657 aa27.07■■□□□ 1.92
PRKCSH-211ENST00000590098 PHLPP1O60346 1717 aa27.07■■□□□ 1.92
PRKCSH-211ENST00000590098 ATF3P18847 181 aa27.06■■□□□ 1.92
PRKCSH-211ENST00000590098 CADPS2Q86UW7 1296 aa27.06■■□□□ 1.92
PRKCSH-211ENST00000590098 CLTCL1P53675 1640 aa27.05■■□□□ 1.92
PRKCSH-211ENST00000590098 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.05■■□□□ 1.92
PRKCSH-211ENST00000590098 SETBP1Q9Y6X0 1596 aa27.05■■□□□ 1.92
PRKCSH-211ENST00000590098 KIF1BO60333 1816 aa27.04■■□□□ 1.92
PRKCSH-211ENST00000590098 HFM1A2PYH4 1435 aa27.03■■□□□ 1.92
PRKCSH-211ENST00000590098 POTEAQ6S8J7 498 aa27.03■■□□□ 1.92
PRKCSH-211ENST00000590098 NRXN3Q9Y4C0 1643 aa27.03■■□□□ 1.92
PRKCSH-211ENST00000590098 NEXMIFQ5QGS0 1516 aa26.98■■□□□ 1.91
PRKCSH-211ENST00000590098 JCADQ9P266 1359 aa26.97■■□□□ 1.91
PRKCSH-211ENST00000590098 XRN1Q8IZH2 1706 aaKnown RBP26.97■■□□□ 1.91
PRKCSH-211ENST00000590098 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
PRKCSH-211ENST00000590098 METP08581 1390 aa26.97■■□□□ 1.91
PRKCSH-211ENST00000590098 COL16A1Q07092 1604 aaPredicted RBP26.94■■□□□ 1.9
PRKCSH-211ENST00000590098 DCCP43146 1447 aa26.92■■□□□ 1.9
PRKCSH-211ENST00000590098 VGFO15240 615 aaPredicted RBP26.91■■□□□ 1.9
PRKCSH-211ENST00000590098 BRINP3Q76B58 766 aa26.91■■□□□ 1.9
PRKCSH-211ENST00000590098 AHDC1Q5TGY3 1603 aaPredicted RBP26.9■■□□□ 1.9
PRKCSH-211ENST00000590098 RPGRIP1LQ68CZ1 1315 aa26.88■■□□□ 1.89
PRKCSH-211ENST00000590098 SPATA31A6Q5VVP1 1343 aa26.86■■□□□ 1.89
PRKCSH-211ENST00000590098 LRP6O75581 1613 aa26.84■■□□□ 1.89
PRKCSH-211ENST00000590098 MST1RQ04912 1400 aa26.82■■□□□ 1.88
PRKCSH-211ENST00000590098 ADGRL3Q9HAR2 1447 aa26.82■■□□□ 1.88
PRKCSH-211ENST00000590098 FOXD1Q16676 465 aa26.82■■□□□ 1.88
PRKCSH-211ENST00000590098 MEX3CQ5U5Q3 659 aaKnown RBP26.82■■□□□ 1.88
PRKCSH-211ENST00000590098 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
PRKCSH-211ENST00000590098 PPLO60437 1756 aa26.81■■□□□ 1.88
PRKCSH-211ENST00000590098 ASXL1Q8IXJ9 1541 aa26.81■■□□□ 1.88
PRKCSH-211ENST00000590098 SETD1AO15047 1707 aaKnown RBP26.79■■□□□ 1.88
PRKCSH-211ENST00000590098 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
PRKCSH-211ENST00000590098 DDX17Q92841 729 aaKnown RBP26.79■■□□□ 1.88
PRKCSH-211ENST00000590098 PTCH1Q13635 1447 aa26.77■■□□□ 1.88
PRKCSH-211ENST00000590098 CCDC144AA2RUR9 1427 aa26.76■■□□□ 1.87
PRKCSH-211ENST00000590098 MPHOSPH9Q99550 1183 aa26.76■■□□□ 1.87
PRKCSH-211ENST00000590098 NHSL1Q5SYE7 1610 aa26.76■■□□□ 1.87
PRKCSH-211ENST00000590098 NUTM2BA6NNL0 878 aaPredicted RBP26.75■■□□□ 1.87
PRKCSH-211ENST00000590098 NUTM2EB1AL46 878 aaPredicted RBP26.75■■□□□ 1.87
PRKCSH-211ENST00000590098 NUTM2AQ8IVF1 878 aaPredicted RBP26.75■■□□□ 1.87
PRKCSH-211ENST00000590098 ROBO2Q9HCK4 1378 aa26.73■■□□□ 1.87
PRKCSH-211ENST00000590098 SETD5Q9C0A6 1442 aa26.73■■□□□ 1.87
PRKCSH-211ENST00000590098 LRRC59Q96AG4 307 aaKnown RBP26.72■■□□□ 1.87
PRKCSH-211ENST00000590098 RGL3Q3MIN7 710 aa26.71■■□□□ 1.87
PRKCSH-211ENST00000590098 ZNF772Q68DY9 489 aaPredicted RBP26.71■■□□□ 1.87
PRKCSH-211ENST00000590098 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
PRKCSH-211ENST00000590098 C1orf167Q5SNV9 1468 aa26.69■■□□□ 1.86
PRKCSH-211ENST00000590098 PRAG1Q86YV5 1406 aa26.69■■□□□ 1.86
PRKCSH-211ENST00000590098 ADGRF5Q8IZF2 1346 aa26.67■■□□□ 1.86
PRKCSH-211ENST00000590098 ORAI2Q96SN7 254 aa26.67■■□□□ 1.86
PRKCSH-211ENST00000590098 SPATA31E1Q6ZUB1 1445 aa26.66■■□□□ 1.86
PRKCSH-211ENST00000590098 ANKRD30BQ9BXX2 1392 aa26.66■■□□□ 1.86
PRKCSH-211ENST00000590098 IFT172Q9UG01 1749 aa26.64■■□□□ 1.85
PRKCSH-211ENST00000590098 PNPLA6Q8IY17 1366 aa26.61■■□□□ 1.85
PRKCSH-211ENST00000590098 STK26Q9P289 416 aa26.61■■□□□ 1.85
PRKCSH-211ENST00000590098 AFF2P51816 1311 aa26.6■■□□□ 1.85
PRKCSH-211ENST00000590098 LAMC1P11047 1609 aa26.59■■□□□ 1.85
PRKCSH-211ENST00000590098 RXRBP28702 533 aa26.58■■□□□ 1.85
PRKCSH-211ENST00000590098 SOS2Q07890 1332 aaPredicted RBP26.57■■□□□ 1.84
PRKCSH-211ENST00000590098 WAPLQ7Z5K2 1190 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms