RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 RIMS2Q9UQ26 1411 aa17.84■□□□□ 0.45
GPATCH1-202ENST00000590062 NEXMIFQ5QGS0 1516 aa17.83■□□□□ 0.45
GPATCH1-202ENST00000590062 IQGAP1P46940 1657 aa17.83■□□□□ 0.44
GPATCH1-202ENST00000590062 RPGRIP1LQ68CZ1 1315 aa17.82■□□□□ 0.44
GPATCH1-202ENST00000590062 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
GPATCH1-202ENST00000590062 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
GPATCH1-202ENST00000590062 TXNDC2Q86VQ3 553 aa17.81■□□□□ 0.44
GPATCH1-202ENST00000590062 PPP1R15AO75807 674 aaPredicted RBP17.8■□□□□ 0.44
GPATCH1-202ENST00000590062 LTKP29376 864 aa17.8■□□□□ 0.44
GPATCH1-202ENST00000590062 ZNF326Q5BKZ1 582 aaKnown RBP17.8■□□□□ 0.44
GPATCH1-202ENST00000590062 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.8■□□□□ 0.44
GPATCH1-202ENST00000590062 PPLO60437 1756 aa17.79■□□□□ 0.44
GPATCH1-202ENST00000590062 CLSPNQ9HAW4 1339 aa17.79■□□□□ 0.44
GPATCH1-202ENST00000590062 IFT172Q9UG01 1749 aa17.79■□□□□ 0.44
GPATCH1-202ENST00000590062 PLEKHG1Q9ULL1 1385 aa17.78■□□□□ 0.44
GPATCH1-202ENST00000590062 MYOM2P54296 1465 aa17.75■□□□□ 0.43
GPATCH1-202ENST00000590062 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
GPATCH1-202ENST00000590062 NRXN1Q9ULB1 1477 aa17.74■□□□□ 0.43
GPATCH1-202ENST00000590062 RGL3Q3MIN7 710 aa17.73■□□□□ 0.43
GPATCH1-202ENST00000590062 BCANQ96GW7 911 aa17.73■□□□□ 0.43
GPATCH1-202ENST00000590062 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
GPATCH1-202ENST00000590062 VGFO15240 615 aaPredicted RBP17.72■□□□□ 0.43
GPATCH1-202ENST00000590062 STAC3Q96MF2 364 aa17.72■□□□□ 0.43
GPATCH1-202ENST00000590062 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
GPATCH1-202ENST00000590062 DIP2AQ14689 1571 aa17.71■□□□□ 0.43
GPATCH1-202ENST00000590062 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
GPATCH1-202ENST00000590062 PIK3C2GO75747 1445 aa17.7■□□□□ 0.42
GPATCH1-202ENST00000590062 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
GPATCH1-202ENST00000590062 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
GPATCH1-202ENST00000590062 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
GPATCH1-202ENST00000590062 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
GPATCH1-202ENST00000590062 TBX22Q9Y458 520 aa17.66■□□□□ 0.42
GPATCH1-202ENST00000590062 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
GPATCH1-202ENST00000590062 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
GPATCH1-202ENST00000590062 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
GPATCH1-202ENST00000590062 PIK3R4Q99570 1358 aa17.65■□□□□ 0.42
GPATCH1-202ENST00000590062 CPS1P31327 1500 aa17.64■□□□□ 0.41
GPATCH1-202ENST00000590062 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
GPATCH1-202ENST00000590062 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
GPATCH1-202ENST00000590062 LAMC1P11047 1609 aa17.64■□□□□ 0.41
GPATCH1-202ENST00000590062 ALKQ9UM73 1620 aa17.64■□□□□ 0.41
GPATCH1-202ENST00000590062 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
GPATCH1-202ENST00000590062 SENP3Q9H4L4 574 aaPredicted RBP17.63■□□□□ 0.41
GPATCH1-202ENST00000590062 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
GPATCH1-202ENST00000590062 NWD1Q149M9 1564 aa17.62■□□□□ 0.41
GPATCH1-202ENST00000590062 TIMELESSQ9UNS1 1208 aa17.62■□□□□ 0.41
GPATCH1-202ENST00000590062 PRAG1Q86YV5 1406 aa17.62■□□□□ 0.41
GPATCH1-202ENST00000590062 ASXL1Q8IXJ9 1541 aa17.59■□□□□ 0.41
GPATCH1-202ENST00000590062 METP08581 1390 aa17.59■□□□□ 0.41
GPATCH1-202ENST00000590062 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
GPATCH1-202ENST00000590062 KIAA1210Q9ULL0 1709 aa17.58■□□□□ 0.41
GPATCH1-202ENST00000590062 NKTRP30414 1462 aaKnown RBP17.58■□□□□ 0.41
GPATCH1-202ENST00000590062 KDM2AQ9Y2K7 1162 aa17.58■□□□□ 0.4
GPATCH1-202ENST00000590062 CHD2O14647 1828 aaKnown RBP17.58■□□□□ 0.4
GPATCH1-202ENST00000590062 STRCP1A6NGW2 1772 aa17.58■□□□□ 0.4
GPATCH1-202ENST00000590062 XRN1Q8IZH2 1706 aaKnown RBP17.58■□□□□ 0.4
GPATCH1-202ENST00000590062 IQSEC2Q5JU85 1478 aa17.57■□□□□ 0.4
GPATCH1-202ENST00000590062 ADGRB1O14514 1584 aa17.57■□□□□ 0.4
GPATCH1-202ENST00000590062 PTPRUQ92729 1446 aa17.56■□□□□ 0.4
GPATCH1-202ENST00000590062 KCNA6P17658 529 aa17.56■□□□□ 0.4
GPATCH1-202ENST00000590062 CERKQ8TCT0 537 aa17.56■□□□□ 0.4
GPATCH1-202ENST00000590062 CFAP70Q5T0N1 1121 aa17.54■□□□□ 0.4
GPATCH1-202ENST00000590062 TECPR2O15040 1411 aa17.54■□□□□ 0.4
GPATCH1-202ENST00000590062 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
GPATCH1-202ENST00000590062 TRPM1Q7Z4N2 1603 aa17.52■□□□□ 0.4
GPATCH1-202ENST00000590062 PTCH1Q13635 1447 aa17.52■□□□□ 0.4
GPATCH1-202ENST00000590062 KNDC1Q76NI1 1749 aa17.52■□□□□ 0.39
GPATCH1-202ENST00000590062 LRPPRCP42704 1394 aaKnown RBP17.52■□□□□ 0.39
GPATCH1-202ENST00000590062 ABCC11Q96J66 1382 aa17.51■□□□□ 0.39
GPATCH1-202ENST00000590062 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
GPATCH1-202ENST00000590062 AMOTL2Q9Y2J4 779 aa17.5■□□□□ 0.39
GPATCH1-202ENST00000590062 NBPF8Q3BBV2 869 aa17.49■□□□□ 0.39
GPATCH1-202ENST00000590062 RALGAPBQ86X10 1494 aa17.49■□□□□ 0.39
GPATCH1-202ENST00000590062 DLC1Q96QB1 1528 aa17.48■□□□□ 0.39
GPATCH1-202ENST00000590062 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
GPATCH1-202ENST00000590062 GPRASP1Q5JY77 1395 aa17.48■□□□□ 0.39
GPATCH1-202ENST00000590062 NCOA3Q9Y6Q9 1424 aa17.47■□□□□ 0.39
GPATCH1-202ENST00000590062 TMEM132EQ6IEE7 984 aa17.47■□□□□ 0.39
GPATCH1-202ENST00000590062 TMEM94Q12767 1356 aa17.46■□□□□ 0.39
GPATCH1-202ENST00000590062 ROBO2Q9HCK4 1378 aa17.46■□□□□ 0.39
GPATCH1-202ENST00000590062 XIRP1Q702N8 1843 aaKnown RBP17.46■□□□□ 0.39
GPATCH1-202ENST00000590062 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
GPATCH1-202ENST00000590062 SIRT1Q96EB6 747 aa17.45■□□□□ 0.38
GPATCH1-202ENST00000590062 NBPF1Q3BBV0 1214 aa17.44■□□□□ 0.38
GPATCH1-202ENST00000590062 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
GPATCH1-202ENST00000590062 C14orf37Q86TY3 774 aa17.43■□□□□ 0.38
GPATCH1-202ENST00000590062 MSH6P52701 1360 aa17.42■□□□□ 0.38
GPATCH1-202ENST00000590062 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
GPATCH1-202ENST00000590062 STK26Q9P289 416 aa17.4■□□□□ 0.38
GPATCH1-202ENST00000590062 ADGRL3Q9HAR2 1447 aa17.39■□□□□ 0.38
GPATCH1-202ENST00000590062 TOM1O60784 492 aa17.39■□□□□ 0.37
GPATCH1-202ENST00000590062 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
GPATCH1-202ENST00000590062 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
GPATCH1-202ENST00000590062 UBAP1LF5GYI3 381 aa17.38■□□□□ 0.37
GPATCH1-202ENST00000590062 PLEKHH1Q9ULM0 1364 aa17.38■□□□□ 0.37
GPATCH1-202ENST00000590062 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
GPATCH1-202ENST00000590062 DCCP43146 1447 aa17.38■□□□□ 0.37
GPATCH1-202ENST00000590062 TRAK1Q9UPV9 953 aa17.37■□□□□ 0.37
GPATCH1-202ENST00000590062 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.36■□□□□ 0.37
GPATCH1-202ENST00000590062 PRAM1Q96QH2 718 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms