RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 RBM33Q96EV2 1170 aaKnown RBP21.65■■□□□ 1.06
SF3A2-205ENST00000590034 SLC52A1Q9NWF4 448 aa21.65■■□□□ 1.06
SF3A2-205ENST00000590034 ROBO1Q9Y6N7 1651 aa21.65■■□□□ 1.06
SF3A2-205ENST00000590034 UNC13BO14795 1591 aa21.65■■□□□ 1.06
SF3A2-205ENST00000590034 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.06
SF3A2-205ENST00000590034 TMEM131LA2VDJ0 1609 aa21.63■■□□□ 1.05
SF3A2-205ENST00000590034 RGS17Q9UGC6 210 aaPredicted RBP21.62■■□□□ 1.05
SF3A2-205ENST00000590034 CHD2O14647 1828 aaKnown RBP21.61■■□□□ 1.05
SF3A2-205ENST00000590034 E9PCH4 1651 aa21.6■■□□□ 1.05
SF3A2-205ENST00000590034 PROSER2Q86WR7 435 aaPredicted RBP21.6■■□□□ 1.05
SF3A2-205ENST00000590034 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.05
SF3A2-205ENST00000590034 PLEKHG1Q9ULL1 1385 aa21.58■■□□□ 1.04
SF3A2-205ENST00000590034 IQGAP3Q86VI3 1631 aa21.55■■□□□ 1.04
SF3A2-205ENST00000590034 BCANQ96GW7 911 aa21.55■■□□□ 1.04
SF3A2-205ENST00000590034 MSH6P52701 1360 aa21.53■■□□□ 1.04
SF3A2-205ENST00000590034 ROCK1Q13464 1354 aa21.52■■□□□ 1.04
SF3A2-205ENST00000590034 PPP1R15AO75807 674 aaPredicted RBP21.51■■□□□ 1.03
SF3A2-205ENST00000590034 ADAMTS13Q76LX8 1427 aa21.51■■□□□ 1.03
SF3A2-205ENST00000590034 PHLPP1O60346 1717 aa21.51■■□□□ 1.03
SF3A2-205ENST00000590034 NUTM2DQ5VT03 806 aaPredicted RBP21.48■■□□□ 1.03
SF3A2-205ENST00000590034 SLAIN2Q9P270 581 aa21.48■■□□□ 1.03
SF3A2-205ENST00000590034 CHGAP10645 457 aaKnown RBP21.47■■□□□ 1.03
SF3A2-205ENST00000590034 POTEAQ6S8J7 498 aa21.47■■□□□ 1.03
SF3A2-205ENST00000590034 TBX22Q9Y458 520 aa21.47■■□□□ 1.03
SF3A2-205ENST00000590034 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
SF3A2-205ENST00000590034 COL16A1Q07092 1604 aaPredicted RBP21.47■■□□□ 1.03
SF3A2-205ENST00000590034 HDGFP51858 240 aaKnown RBP21.45■■□□□ 1.02
SF3A2-205ENST00000590034 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.45■■□□□ 1.02
SF3A2-205ENST00000590034 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
SF3A2-205ENST00000590034 NUP155O75694 1391 aa21.43■■□□□ 1.02
SF3A2-205ENST00000590034 NCOA3Q9Y6Q9 1424 aa21.43■■□□□ 1.02
SF3A2-205ENST00000590034 NRXN3Q9Y4C0 1643 aa21.42■■□□□ 1.02
SF3A2-205ENST00000590034 SPHKAPQ2M3C7 1700 aa21.41■■□□□ 1.02
SF3A2-205ENST00000590034 TRPM2O94759 1503 aa21.4■■□□□ 1.02
SF3A2-205ENST00000590034 PTPRUQ92729 1446 aa21.4■■□□□ 1.02
SF3A2-205ENST00000590034 PIK3R4Q99570 1358 aa21.4■■□□□ 1.02
SF3A2-205ENST00000590034 JCADQ9P266 1359 aa21.4■■□□□ 1.02
SF3A2-205ENST00000590034 ITGAEP38570 1179 aa21.4■■□□□ 1.02
SF3A2-205ENST00000590034 SETD1AO15047 1707 aaKnown RBP21.38■■□□□ 1.01
SF3A2-205ENST00000590034 XRN1Q8IZH2 1706 aaKnown RBP21.38■■□□□ 1.01
SF3A2-205ENST00000590034 LRP6O75581 1613 aa21.37■■□□□ 1.01
SF3A2-205ENST00000590034 AHDC1Q5TGY3 1603 aaPredicted RBP21.37■■□□□ 1.01
SF3A2-205ENST00000590034 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
SF3A2-205ENST00000590034 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
SF3A2-205ENST00000590034 SETBP1Q9Y6X0 1596 aa21.36■■□□□ 1.01
SF3A2-205ENST00000590034 C19orf44Q9H6X5 657 aa21.34■■□□□ 1.01
SF3A2-205ENST00000590034 AMOTL2Q9Y2J4 779 aa21.34■■□□□ 1.01
SF3A2-205ENST00000590034 SHPRHQ149N8 1683 aa21.34■■□□□ 1.01
SF3A2-205ENST00000590034 CADPS2Q86UW7 1296 aa21.33■■□□□ 1.01
SF3A2-205ENST00000590034 CLTCL1P53675 1640 aa21.32■■□□□ 1
SF3A2-205ENST00000590034 ATF3P18847 181 aa21.31■■□□□ 1
SF3A2-205ENST00000590034 NEXMIFQ5QGS0 1516 aa21.29■■□□□ 1
SF3A2-205ENST00000590034 DCCP43146 1447 aa21.29■■□□□ 1
SF3A2-205ENST00000590034 SPATA31A6Q5VVP1 1343 aa21.29■■□□□ 1
SF3A2-205ENST00000590034 METP08581 1390 aa21.28■■□□□ 1
SF3A2-205ENST00000590034 BRINP3Q76B58 766 aa21.28■■□□□ 1
SF3A2-205ENST00000590034 ASXL1Q8IXJ9 1541 aa21.27■■□□□ 1
SF3A2-205ENST00000590034 MST1RQ04912 1400 aa21.26■□□□□ 0.99
SF3A2-205ENST00000590034 NHSL1Q5SYE7 1610 aa21.26■□□□□ 0.99
SF3A2-205ENST00000590034 NALCNQ8IZF0 1738 aa21.24■□□□□ 0.99
SF3A2-205ENST00000590034 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
SF3A2-205ENST00000590034 KIF1BO60333 1816 aa21.24■□□□□ 0.99
SF3A2-205ENST00000590034 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
SF3A2-205ENST00000590034 NAIPQ13075 1403 aa21.22■□□□□ 0.99
SF3A2-205ENST00000590034 ADGRL3Q9HAR2 1447 aa21.21■□□□□ 0.99
SF3A2-205ENST00000590034 MEX3CQ5U5Q3 659 aaKnown RBP21.2■□□□□ 0.98
SF3A2-205ENST00000590034 SETD5Q9C0A6 1442 aa21.19■□□□□ 0.98
SF3A2-205ENST00000590034 ZNF772Q68DY9 489 aaPredicted RBP21.17■□□□□ 0.98
SF3A2-205ENST00000590034 NUTM2BA6NNL0 878 aaPredicted RBP21.15■□□□□ 0.98
SF3A2-205ENST00000590034 NUTM2EB1AL46 878 aaPredicted RBP21.15■□□□□ 0.98
SF3A2-205ENST00000590034 NUTM2AQ8IVF1 878 aaPredicted RBP21.15■□□□□ 0.98
SF3A2-205ENST00000590034 DDX17Q92841 729 aaKnown RBP21.15■□□□□ 0.98
SF3A2-205ENST00000590034 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
SF3A2-205ENST00000590034 PTCH1Q13635 1447 aa21.12■□□□□ 0.97
SF3A2-205ENST00000590034 PPLO60437 1756 aa21.12■□□□□ 0.97
SF3A2-205ENST00000590034 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
SF3A2-205ENST00000590034 LAMC1P11047 1609 aa21.11■□□□□ 0.97
SF3A2-205ENST00000590034 PNPLA6Q8IY17 1366 aa21.11■□□□□ 0.97
SF3A2-205ENST00000590034 ROBO2Q9HCK4 1378 aa21.1■□□□□ 0.97
SF3A2-205ENST00000590034 C1orf167Q5SNV9 1468 aa21.1■□□□□ 0.97
SF3A2-205ENST00000590034 AFF2P51816 1311 aa21.09■□□□□ 0.97
SF3A2-205ENST00000590034 UPF1Q92900 1129 aaKnown RBP eCLIP21.09■□□□□ 0.97
SF3A2-205ENST00000590034 PRAG1Q86YV5 1406 aa21.09■□□□□ 0.97
SF3A2-205ENST00000590034 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
SF3A2-205ENST00000590034 CDK12Q9NYV4 1490 aaPredicted RBP21.07■□□□□ 0.96
SF3A2-205ENST00000590034 RXRBP28702 533 aa21.07■□□□□ 0.96
SF3A2-205ENST00000590034 VGFO15240 615 aaPredicted RBP21.05■□□□□ 0.96
SF3A2-205ENST00000590034 C8orf37Q96NL8 207 aa21.04■□□□□ 0.96
SF3A2-205ENST00000590034 ORAI2Q96SN7 254 aa21.03■□□□□ 0.96
SF3A2-205ENST00000590034 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
SF3A2-205ENST00000590034 RGS12O14924 1447 aa21.02■□□□□ 0.96
SF3A2-205ENST00000590034 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.95
SF3A2-205ENST00000590034 SOS2Q07890 1332 aaPredicted RBP21.01■□□□□ 0.95
SF3A2-205ENST00000590034 FOXD1Q16676 465 aa21■□□□□ 0.95
SF3A2-205ENST00000590034 IFT172Q9UG01 1749 aa20.98■□□□□ 0.95
SF3A2-205ENST00000590034 CDC42BPGQ6DT37 1551 aa20.98■□□□□ 0.95
SF3A2-205ENST00000590034 COL22A1Q8NFW1 1626 aaPredicted RBP20.98■□□□□ 0.95
SF3A2-205ENST00000590034 ADAMTS2O95450 1211 aa20.97■□□□□ 0.95
SF3A2-205ENST00000590034 QTRT2Q9H974 415 aaKnown RBP20.97■□□□□ 0.95
SF3A2-205ENST00000590034 RBM6P78332 1123 aaKnown RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 664.5 ms