RNA–Protein interactions for RNA: ENST00000589886.5

RANBP3-217, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 472 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-217ENST00000589886 PLPPR3Q6T4P5 718 aa22.7■■□□□ 1.22
RANBP3-217ENST00000589886 ZFYVE9O95405 1425 aa22.7■■□□□ 1.22
RANBP3-217ENST00000589886 ZNF326Q5BKZ1 582 aaKnown RBP22.69■■□□□ 1.22
RANBP3-217ENST00000589886 NRXN1Q9ULB1 1477 aa22.67■■□□□ 1.22
RANBP3-217ENST00000589886 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
RANBP3-217ENST00000589886 THEMISQ8N1K5 641 aaPredicted RBP22.65■■□□□ 1.22
RANBP3-217ENST00000589886 SLIT1O75093 1534 aa22.65■■□□□ 1.22
RANBP3-217ENST00000589886 TMEM2Q9UHN6 1383 aa22.64■■□□□ 1.22
RANBP3-217ENST00000589886 VGFO15240 615 aaPredicted RBP22.64■■□□□ 1.21
RANBP3-217ENST00000589886 HDGFP51858 240 aaKnown RBP22.64■■□□□ 1.21
RANBP3-217ENST00000589886 KDM2AQ9Y2K7 1162 aa22.64■■□□□ 1.21
RANBP3-217ENST00000589886 ARHGAP23Q9P227 1491 aa22.64■■□□□ 1.21
RANBP3-217ENST00000589886 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.63■■□□□ 1.21
RANBP3-217ENST00000589886 RIMS2Q9UQ26 1411 aa22.63■■□□□ 1.21
RANBP3-217ENST00000589886 NBPF8Q3BBV2 869 aa22.61■■□□□ 1.21
RANBP3-217ENST00000589886 KIAA1210Q9ULL0 1709 aa22.61■■□□□ 1.21
RANBP3-217ENST00000589886 TRPM1Q7Z4N2 1603 aa22.59■■□□□ 1.21
RANBP3-217ENST00000589886 RALGAPBQ86X10 1494 aa22.59■■□□□ 1.21
RANBP3-217ENST00000589886 ADGRF5Q8IZF2 1346 aa22.58■■□□□ 1.21
RANBP3-217ENST00000589886 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
RANBP3-217ENST00000589886 LAMC1P11047 1609 aa22.56■■□□□ 1.2
RANBP3-217ENST00000589886 EID1Q9Y6B2 187 aa22.54■■□□□ 1.2
RANBP3-217ENST00000589886 GPRASP1Q5JY77 1395 aa22.52■■□□□ 1.2
RANBP3-217ENST00000589886 SETBP1Q9Y6X0 1596 aa22.52■■□□□ 1.2
RANBP3-217ENST00000589886 C14orf93Q9H972 538 aaKnown RBP22.51■■□□□ 1.19
RANBP3-217ENST00000589886 SCAF11Q99590 1463 aaKnown RBP22.51■■□□□ 1.19
RANBP3-217ENST00000589886 PLEKHG1Q9ULL1 1385 aa22.5■■□□□ 1.19
RANBP3-217ENST00000589886 TXNDC2Q86VQ3 553 aa22.5■■□□□ 1.19
RANBP3-217ENST00000589886 LMTK3Q96Q04 1460 aa22.49■■□□□ 1.19
RANBP3-217ENST00000589886 LTKP29376 864 aa22.49■■□□□ 1.19
RANBP3-217ENST00000589886 NUTM2DQ5VT03 806 aaPredicted RBP22.49■■□□□ 1.19
RANBP3-217ENST00000589886 NRXN3Q9Y4C0 1643 aa22.48■■□□□ 1.19
RANBP3-217ENST00000589886 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
RANBP3-217ENST00000589886 ROCK2O75116 1388 aaKnown RBP22.47■■□□□ 1.19
RANBP3-217ENST00000589886 ALKQ9UM73 1620 aa22.46■■□□□ 1.19
RANBP3-217ENST00000589886 POLR1AO95602 1720 aaPredicted RBP22.45■■□□□ 1.19
RANBP3-217ENST00000589886 CFAP70Q5T0N1 1121 aa22.45■■□□□ 1.18
RANBP3-217ENST00000589886 SETD1AO15047 1707 aaKnown RBP22.45■■□□□ 1.18
RANBP3-217ENST00000589886 ADGRB1O14514 1584 aa22.44■■□□□ 1.18
RANBP3-217ENST00000589886 MED14O60244 1454 aa22.44■■□□□ 1.18
RANBP3-217ENST00000589886 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
RANBP3-217ENST00000589886 DIP2AQ14689 1571 aa22.43■■□□□ 1.18
RANBP3-217ENST00000589886 NBPF1Q3BBV0 1214 aa22.43■■□□□ 1.18
RANBP3-217ENST00000589886 CARD11Q9BXL7 1154 aa22.42■■□□□ 1.18
RANBP3-217ENST00000589886 ADAMTS13Q76LX8 1427 aa22.41■■□□□ 1.18
RANBP3-217ENST00000589886 ASXL1Q8IXJ9 1541 aa22.38■■□□□ 1.17
RANBP3-217ENST00000589886 EIF4G2P78344 907 aaKnown RBP eCLIP22.38■■□□□ 1.17
RANBP3-217ENST00000589886 TBX22Q9Y458 520 aa22.38■■□□□ 1.17
RANBP3-217ENST00000589886 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
RANBP3-217ENST00000589886 USP47Q96K76 1375 aa22.36■■□□□ 1.17
RANBP3-217ENST00000589886 BCANQ96GW7 911 aa22.34■■□□□ 1.17
RANBP3-217ENST00000589886 PIK3R4Q99570 1358 aa22.34■■□□□ 1.17
RANBP3-217ENST00000589886 YTHDC2Q9H6S0 1430 aaKnown RBP22.32■■□□□ 1.16
RANBP3-217ENST00000589886 HSPA2P54652 639 aa22.32■■□□□ 1.16
RANBP3-217ENST00000589886 METP08581 1390 aa22.32■■□□□ 1.16
RANBP3-217ENST00000589886 LRPPRCP42704 1394 aaKnown RBP22.32■■□□□ 1.16
RANBP3-217ENST00000589886 EIF3AQ14152 1382 aaKnown RBP22.32■■□□□ 1.16
RANBP3-217ENST00000589886 NCKAP5LQ9HCH0 1330 aa22.31■■□□□ 1.16
RANBP3-217ENST00000589886 HSPA5P11021 654 aaKnown RBP22.31■■□□□ 1.16
RANBP3-217ENST00000589886 TMEM132EQ6IEE7 984 aa22.31■■□□□ 1.16
RANBP3-217ENST00000589886 KNDC1Q76NI1 1749 aa22.31■■□□□ 1.16
RANBP3-217ENST00000589886 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
RANBP3-217ENST00000589886 STRCQ7RTU9 1775 aa22.3■■□□□ 1.16
RANBP3-217ENST00000589886 ABCC11Q96J66 1382 aa22.29■■□□□ 1.16
RANBP3-217ENST00000589886 SLC26A8Q96RN1 970 aa22.29■■□□□ 1.16
RANBP3-217ENST00000589886 TECPR2O15040 1411 aa22.29■■□□□ 1.16
RANBP3-217ENST00000589886 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
RANBP3-217ENST00000589886 SIRT1Q96EB6 747 aa22.27■■□□□ 1.16
RANBP3-217ENST00000589886 SENP3Q9H4L4 574 aaPredicted RBP22.26■■□□□ 1.15
RANBP3-217ENST00000589886 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
RANBP3-217ENST00000589886 CPS1P31327 1500 aa22.25■■□□□ 1.15
RANBP3-217ENST00000589886 XRN1Q8IZH2 1706 aaKnown RBP22.24■■□□□ 1.15
RANBP3-217ENST00000589886 ST20-MTHFSA0A0A6YYL1 179 aa22.24■■□□□ 1.15
RANBP3-217ENST00000589886 SLC24A1O60721 1099 aa22.24■■□□□ 1.15
RANBP3-217ENST00000589886 TRAK1Q9UPV9 953 aa22.24■■□□□ 1.15
RANBP3-217ENST00000589886 CHD2O14647 1828 aaKnown RBP22.24■■□□□ 1.15
RANBP3-217ENST00000589886 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
RANBP3-217ENST00000589886 FAM135BQ49AJ0 1406 aa22.23■■□□□ 1.15
RANBP3-217ENST00000589886 PTPRUQ92729 1446 aa22.23■■□□□ 1.15
RANBP3-217ENST00000589886 CENPJQ9HC77 1338 aaPredicted RBP22.21■■□□□ 1.15
RANBP3-217ENST00000589886 PTCH1Q13635 1447 aa22.21■■□□□ 1.15
RANBP3-217ENST00000589886 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
RANBP3-217ENST00000589886 STK26Q9P289 416 aa22.2■■□□□ 1.14
RANBP3-217ENST00000589886 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.14
RANBP3-217ENST00000589886 TESK2Q96S53 571 aa22.19■■□□□ 1.14
RANBP3-217ENST00000589886 QRICH2Q9H0J4 1663 aa22.19■■□□□ 1.14
RANBP3-217ENST00000589886 AMOTL2Q9Y2J4 779 aa22.18■■□□□ 1.14
RANBP3-217ENST00000589886 HIRIP3Q9BW71 556 aaPredicted RBP22.17■■□□□ 1.14
RANBP3-217ENST00000589886 KCNA6P17658 529 aa22.16■■□□□ 1.14
RANBP3-217ENST00000589886 AEBP2Q6ZN18 517 aaPredicted RBP22.15■■□□□ 1.14
RANBP3-217ENST00000589886 ROBO2Q9HCK4 1378 aa22.14■■□□□ 1.14
RANBP3-217ENST00000589886 PRAM1Q96QH2 718 aa22.14■■□□□ 1.13
RANBP3-217ENST00000589886 POGKQ9P215 609 aa22.13■■□□□ 1.13
RANBP3-217ENST00000589886 NKTRP30414 1462 aaKnown RBP22.13■■□□□ 1.13
RANBP3-217ENST00000589886 TMF1P82094 1093 aa22.12■■□□□ 1.13
RANBP3-217ENST00000589886 CDCA8Q53HL2 280 aa22.09■■□□□ 1.13
RANBP3-217ENST00000589886 PLEKHH1Q9ULM0 1364 aa22.09■■□□□ 1.13
RANBP3-217ENST00000589886 ADGRB2O60241 1585 aa22.08■■□□□ 1.13
RANBP3-217ENST00000589886 WAPLQ7Z5K2 1190 aa22.08■■□□□ 1.13
RANBP3-217ENST00000589886 PUS7Q96PZ0 661 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms