RNA–Protein interactions for RNA: ENST00000589872.1

NBR1-205, Transcript of NBR1, autophagy cargo receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NBR1, Length 3,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-205ENST00000589872 COL17A1Q9UMD9 1497 aaPredicted RBP16.02■□□□□ 0.16
NBR1-205ENST00000589872 RICTORQ6R327 1708 aa16.02■□□□□ 0.15
NBR1-205ENST00000589872 PRAG1Q86YV5 1406 aa16.02■□□□□ 0.15
NBR1-205ENST00000589872 MAGI2Q86UL8 1455 aa16.01■□□□□ 0.15
NBR1-205ENST00000589872 VIRMAQ69YN4 1812 aaKnown RBP16■□□□□ 0.15
NBR1-205ENST00000589872 ZNF521Q96K83 1311 aa16■□□□□ 0.15
NBR1-205ENST00000589872 IGHDP01880 384 aa16■□□□□ 0.15
NBR1-205ENST00000589872 GOLGA2Q08379 1002 aa16■□□□□ 0.15
NBR1-205ENST00000589872 ARXQ96QS3 562 aa16■□□□□ 0.15
NBR1-205ENST00000589872 PREX2Q70Z35 1606 aa16■□□□□ 0.15
NBR1-205ENST00000589872 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.98■□□□□ 0.15
NBR1-205ENST00000589872 FRMPD1Q5SYB0 1578 aa15.98■□□□□ 0.15
NBR1-205ENST00000589872 BCAR3O75815 825 aa15.98■□□□□ 0.15
NBR1-205ENST00000589872 SPINK5Q9NQ38 1064 aaPredicted RBP15.98■□□□□ 0.15
NBR1-205ENST00000589872 FAM135AQ9P2D6 1515 aa15.97■□□□□ 0.15
NBR1-205ENST00000589872 C9orf84Q5VXU9 1444 aa15.97■□□□□ 0.15
NBR1-205ENST00000589872 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
NBR1-205ENST00000589872 WDR43Q15061 677 aaKnown RBP eCLIP15.96■□□□□ 0.152e-7■■■□□ 17.7
NBR1-205ENST00000589872 CDC42BPAQ5VT25 1732 aa15.96■□□□□ 0.15
NBR1-205ENST00000589872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.96■□□□□ 0.15
NBR1-205ENST00000589872 ERBINQ96RT1 1412 aa15.96■□□□□ 0.14
NBR1-205ENST00000589872 PPP2R1AP30153 589 aa15.96■□□□□ 0.14
NBR1-205ENST00000589872 CCDC146Q8IYE0 955 aa15.95■□□□□ 0.14
NBR1-205ENST00000589872 EIF3AQ14152 1382 aaKnown RBP15.94■□□□□ 0.14
NBR1-205ENST00000589872 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
NBR1-205ENST00000589872 ANTXR1Q9H6X2 564 aa15.93■□□□□ 0.14
NBR1-205ENST00000589872 ARHGEF40Q8TER5 1519 aa15.93■□□□□ 0.14
NBR1-205ENST00000589872 L1TD1Q5T7N2 865 aaKnown RBP15.93■□□□□ 0.14
NBR1-205ENST00000589872 NLRP1Q9C000 1473 aa15.93■□□□□ 0.14
NBR1-205ENST00000589872 PRDM15P57071 1507 aaPredicted RBP15.93■□□□□ 0.14
NBR1-205ENST00000589872 XRCC6P12956 609 aaKnown RBP eCLIP15.92■□□□□ 0.14
NBR1-205ENST00000589872 TMF1P82094 1093 aa15.92■□□□□ 0.14
NBR1-205ENST00000589872 BECN1Q14457 450 aa15.92■□□□□ 0.14
NBR1-205ENST00000589872 A2MP01023 1474 aa15.92■□□□□ 0.14
NBR1-205ENST00000589872 TRMT2AQ8IZ69 625 aaKnown RBP15.91■□□□□ 0.14
NBR1-205ENST00000589872 PANK2Q9BZ23 570 aa15.91■□□□□ 0.14
NBR1-205ENST00000589872 CCDC144AA2RUR9 1427 aa15.91■□□□□ 0.14
NBR1-205ENST00000589872 DMRT2Q9Y5R5 561 aa15.9■□□□□ 0.14
NBR1-205ENST00000589872 TSPY4P0CV99 314 aa15.9■□□□□ 0.14
NBR1-205ENST00000589872 TSPY10P0CW01 314 aa15.9■□□□□ 0.14
NBR1-205ENST00000589872 HNRNPMP52272 730 aaKnown RBP eCLIP15.9■□□□□ 0.14
NBR1-205ENST00000589872 PKNOX2Q96KN3 472 aa15.9■□□□□ 0.14
NBR1-205ENST00000589872 TTC37Q6PGP7 1564 aa15.89■□□□□ 0.13
NBR1-205ENST00000589872 CD109Q6YHK3 1445 aa15.89■□□□□ 0.13
NBR1-205ENST00000589872 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
NBR1-205ENST00000589872 APAF1O14727 1248 aa15.88■□□□□ 0.13
NBR1-205ENST00000589872 NAP1L5Q96NT1 182 aaPredicted RBP15.88■□□□□ 0.13
NBR1-205ENST00000589872 GZF1Q9H116 711 aaPredicted RBP15.88■□□□□ 0.13
NBR1-205ENST00000589872 SPRYD3Q8NCJ5 442 aa15.88■□□□□ 0.13
NBR1-205ENST00000589872 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
NBR1-205ENST00000589872 NKTRP30414 1462 aaKnown RBP15.88■□□□□ 0.13
NBR1-205ENST00000589872 PLCH2O75038 1416 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 PLA2R1Q13018 1463 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 TSPOAP1O95153 1857 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 ADAMTSL3P82987 1691 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
NBR1-205ENST00000589872 PANK1Q8TE04 598 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 TBC1D2Q9BYX2 928 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 LAMC1P11047 1609 aa15.87■□□□□ 0.13
NBR1-205ENST00000589872 FSD2A1L4K1 749 aa15.85■□□□□ 0.13
NBR1-205ENST00000589872 GOLGA6L3A6NEY3 463 aa15.85■□□□□ 0.13
NBR1-205ENST00000589872 CLUAP1Q96AJ1 413 aa15.85■□□□□ 0.13
NBR1-205ENST00000589872 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
NBR1-205ENST00000589872 PNNQ9H307 717 aaKnown RBP15.85■□□□□ 0.13
NBR1-205ENST00000589872 AGLP35573 1532 aa15.84■□□□□ 0.13
NBR1-205ENST00000589872 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.12
NBR1-205ENST00000589872 TBC1D32Q96NH3 1257 aa15.83■□□□□ 0.12
NBR1-205ENST00000589872 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.129e-9■■■□□ 15.8
NBR1-205ENST00000589872 CGNL1Q0VF96 1302 aa15.83■□□□□ 0.12
NBR1-205ENST00000589872 CLCN1P35523 988 aa15.83■□□□□ 0.12
NBR1-205ENST00000589872 ABCC1P33527 1531 aa15.82■□□□□ 0.12
NBR1-205ENST00000589872 MCM4P33991 863 aa15.82■□□□□ 0.12
NBR1-205ENST00000589872 FAM69CQ0P6D2 419 aa15.81■□□□□ 0.12
NBR1-205ENST00000589872 MAST1Q9Y2H9 1570 aa15.81■□□□□ 0.12
NBR1-205ENST00000589872 MROH2AA6NES4 1674 aa15.81■□□□□ 0.12
NBR1-205ENST00000589872 E9PSI1 815 aa15.81■□□□□ 0.12
NBR1-205ENST00000589872 PDE3AQ14432 1141 aa15.81■□□□□ 0.12
NBR1-205ENST00000589872 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
NBR1-205ENST00000589872 ZMYND15Q9H091 742 aa15.8■□□□□ 0.12
NBR1-205ENST00000589872 TNNQ9UQP3 1299 aa15.8■□□□□ 0.12
NBR1-205ENST00000589872 PLEKHD1A6NEE1 506 aa15.8■□□□□ 0.12
NBR1-205ENST00000589872 GLIPR1L2Q4G1C9 344 aa15.79■□□□□ 0.12
NBR1-205ENST00000589872 PCDHB15Q9Y5E8 787 aa15.79■□□□□ 0.12
NBR1-205ENST00000589872 ARHGEF5Q12774 1597 aa15.79■□□□□ 0.12
NBR1-205ENST00000589872 HSP90AA2PQ14568 343 aaPredicted RBP15.79■□□□□ 0.12
NBR1-205ENST00000589872 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
NBR1-205ENST00000589872 CENPJQ9HC77 1338 aaPredicted RBP15.78■□□□□ 0.12
NBR1-205ENST00000589872 PDZRN3Q9UPQ7 1066 aa15.78■□□□□ 0.12
NBR1-205ENST00000589872 EIF2AK4Q9P2K8 1649 aaKnown RBP15.78■□□□□ 0.12
NBR1-205ENST00000589872 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
NBR1-205ENST00000589872 MLH3Q9UHC1 1453 aa15.78■□□□□ 0.12
NBR1-205ENST00000589872 HSP90AA1P07900 732 aaKnown RBP15.78■□□□□ 0.12
NBR1-205ENST00000589872 UPF2Q9HAU5 1272 aaKnown RBP15.78■□□□□ 0.12
NBR1-205ENST00000589872 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.12
NBR1-205ENST00000589872 HECW2Q9P2P5 1572 aa15.77■□□□□ 0.11
NBR1-205ENST00000589872 INO80Q9ULG1 1556 aaPredicted RBP15.77■□□□□ 0.11
NBR1-205ENST00000589872 TRAK2O60296 914 aa15.76■□□□□ 0.11
NBR1-205ENST00000589872 POGZQ7Z3K3 1410 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms