RNA–Protein interactions for RNA: ENST00000589759.1

ATP6V0A1-223, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-223	ENST00000589759	DYNC1I1	O14576	645 aa		6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	FAM161A	Q3B820	660 aa		6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	FAM9B	Q8IZU0	186 aa		6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	HIRIP3	Q9BW71	556 aa	Predicted RBP	6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	CCDC94	Q9BW85	323 aa	Predicted RBP	6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	MYH16	Q9H6N6	1097 aa		6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	DNMBP	Q6XZF7	1577 aa		6.61	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	CCDC7	Q96M83	1385 aa		6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	ZSCAN20	P17040	1043 aa	Predicted RBP	6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	SLC4A3	P48751	1232 aa		6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	SLC20A2	Q08357	652 aa		6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	ANP32B	Q92688	251 aa	Known RBP	6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	TRIM44	Q96DX7	344 aa	Predicted RBP	6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	ZNF830	Q96NB3	372 aa	Predicted RBP	6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	SGIP1	Q9BQI5	828 aa		6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	PANK2	Q9BZ23	570 aa		6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	GCC2	Q8IWJ2	1684 aa		6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	CFAP65	Q6ZU64	1925 aa	Known RBP	6.6	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759		E9PCH4	1651 aa		6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	PTPN23	Q9H3S7	1636 aa		6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	BECN1	Q14457	450 aa		6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	KANK4	Q5T7N3	995 aa	Predicted RBP	6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	EXOC6	Q8TAG9	804 aa		6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	GRPEL1	Q9HAV7	217 aa		6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	BCCIP	Q9P287	314 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	EIF4G3	O43432	1585 aa	Known RBP	6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	ZMYM4	Q5VZL5	1548 aa		6.59	□□□□□ -1.35
ATP6V0A1-223	ENST00000589759	BIVM-ERCC5	R4GMW8	1640 aa		6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	C8orf34	Q49A92	452 aa		6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	ZSCAN30	Q86W11	494 aa		6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	OCEL1	Q9H607	264 aa		6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	NLRP1	Q9C000	1473 aa		6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	UACA	Q9BZF9	1416 aa		6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	TARBP1	Q13395	1621 aa	Known RBP	6.58	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	KDM2B	Q8NHM5	1336 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	POTEB3	A0JP26	581 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	SPDYE4	A6NLX3	237 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	POTEB	Q6S5H4	581 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	HOMEZ	Q8IX15	550 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	PPP1R9B	Q96SB3	815 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CHMP4A	Q9BY43	222 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	ANTXR1	Q9H6X2	564 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	PCDHB13	Q9Y5F0	798 aa		6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	AQR	O60306	1485 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	POLA1	P09884	1462 aa	Predicted RBP	6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	LRPPRC	P42704	1394 aa	Known RBP	6.57	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CCDC18	Q5T9S5	1454 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	IRX3	P78415	501 aa	Predicted RBP	6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CCDC173	Q0VFZ6	552 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	HS1BP3	Q53T59	392 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	SECISBP2L	Q93073	1101 aa	Known RBP	6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	TMEM106C	Q9BVX2	250 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	FAM13B	Q9NYF5	915 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	RIMBP3C	A6NJZ7	1639 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	RIMBP3B	A6NNM3	1639 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	RIMBP3	Q9UFD9	1639 aa		6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	ROCK2	O75116	1388 aa	Known RBP	6.56	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	PLEKHH2	Q8IVE3	1493 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	RAD54L2	Q9Y4B4	1467 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	HSPA5	P11021	654 aa	Known RBP	6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CDK11B	P21127	795 aa	Known RBP	6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	MCM4	P33991	863 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	IRX5	P78411	483 aa	Predicted RBP	6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	PDE3B	Q13370	1112 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CENPQ	Q7L2Z9	268 aa	Predicted RBP	6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	RGS22	Q8NE09	1264 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	PRDM10	Q9NQV6	1147 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CHD1	O14646	1710 aa		6.55	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	LRRC9	Q6ZRR7	1453 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	PRX	Q9BXM0	1461 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	UQCRHL	A0A096LP55	91 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	ZNF500	O60304	480 aa	Predicted RBP	6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	UQCRH	P07919	91 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	MMP14	P50281	582 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	CSPP1	Q1MSJ5	1256 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	C3orf67	Q6ZVT6	689 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	RCAN3	Q9UKA8	241 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	INSR	P06213	1382 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	ZMYM3	Q14202	1370 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	TOP2B	Q02880	1626 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	SHROOM2	Q13796	1616 aa		6.54	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	DDX11L8	A8MPP1	907 aa		6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	MSN	P26038	577 aa	Known RBP	6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	EIF4G2	P78344	907 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	DHX37	Q8IY37	1157 aa	Known RBP	6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	ARHGEF11	O15085	1522 aa		6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	DHX29	Q7Z478	1369 aa	Known RBP	6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	TDRD9	Q8NDG6	1382 aa	Known RBP	6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	IBTK	Q9P2D0	1353 aa	Predicted RBP	6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	BCORL1	Q5H9F3	1711 aa		6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	FGD5	Q6ZNL6	1462 aa		6.53	□□□□□ -1.36
ATP6V0A1-223	ENST00000589759	USP19	O94966	1318 aa		6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	CUX1	P39880	1505 aa		6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	VGLL3	A8MV65	326 aa		6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	TRAK2	O60296	914 aa		6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	PTMS	P20962	102 aa		6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	MCM5	P33992	734 aa		6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	DNTTIP2	Q5QJE6	756 aa	Known RBP	6.52	□□□□□ -1.37
ATP6V0A1-223	ENST00000589759	SASS6	Q6UVJ0	657 aa		6.52	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms