RNA–Protein interactions for RNA: ENST00000589562.1

SLFN11-209, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-209ENST00000589562 FAM117AQ9C073 453 aa12.16□□□□□ -0.46
SLFN11-209ENST00000589562 FAM217BQ9NTX9 383 aaPredicted RBP12.15□□□□□ -0.46
SLFN11-209ENST00000589562 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
SLFN11-209ENST00000589562 ZFRQ96KR1 1074 aaKnown RBP12.14□□□□□ -0.47
SLFN11-209ENST00000589562 DAXXQ9UER7 740 aaPredicted RBP12.14□□□□□ -0.47
SLFN11-209ENST00000589562 SSTR3P32745 418 aaPredicted RBP12.13□□□□□ -0.47
SLFN11-209ENST00000589562 LAPTM4BQ86VI4 370 aa12.13□□□□□ -0.47
SLFN11-209ENST00000589562 IL27Q8NEV9 243 aa12.12□□□□□ -0.47
SLFN11-209ENST00000589562 DDX11L8A8MPP1 907 aa12.11□□□□□ -0.47
SLFN11-209ENST00000589562 PLEKHG3A1L390 1219 aa12.09□□□□□ -0.47
SLFN11-209ENST00000589562 STAC3Q96MF2 364 aa12.08□□□□□ -0.48
SLFN11-209ENST00000589562 RNF40O75150 1001 aa12.07□□□□□ -0.48
SLFN11-209ENST00000589562 SLC10A3P09131 477 aa12.07□□□□□ -0.48
SLFN11-209ENST00000589562 BEGAINQ9BUH8 593 aa12.07□□□□□ -0.48
SLFN11-209ENST00000589562 CD46P15529 392 aa12.06□□□□□ -0.48
SLFN11-209ENST00000589562 GOLGA8CPA6NN73 597 aa12.05□□□□□ -0.48
SLFN11-209ENST00000589562 BCAMP50895 628 aa12.05□□□□□ -0.48
SLFN11-209ENST00000589562 RDH13Q8NBN7 331 aa12.05□□□□□ -0.48
SLFN11-209ENST00000589562 WNT2BQ93097 391 aa12.03□□□□□ -0.48
SLFN11-209ENST00000589562 LRCH3Q96II8 777 aa12.03□□□□□ -0.48
SLFN11-209ENST00000589562 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
SLFN11-209ENST00000589562 HDGFP51858 240 aaKnown RBP12.02□□□□□ -0.49
SLFN11-209ENST00000589562 SULF1Q8IWU6 871 aa12.02□□□□□ -0.49
SLFN11-209ENST00000589562 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
SLFN11-209ENST00000589562 DDRGK1Q96HY6 314 aa12.02□□□□□ -0.49
SLFN11-209ENST00000589562 TMEM132AQ24JP5 1023 aa12.01□□□□□ -0.49
SLFN11-209ENST00000589562 SLF2Q8IX21 1173 aa12□□□□□ -0.49
SLFN11-209ENST00000589562 KCTD12Q96CX2 325 aaKnown RBP12□□□□□ -0.49
SLFN11-209ENST00000589562 SOWAHBA6NEL2 793 aa11.99□□□□□ -0.49
SLFN11-209ENST00000589562 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
SLFN11-209ENST00000589562 CFHP08603 1231 aa11.96□□□□□ -0.49
SLFN11-209ENST00000589562 GCGRP47871 477 aa11.96□□□□□ -0.49
SLFN11-209ENST00000589562 SPIRE2Q8WWL2 714 aa11.96□□□□□ -0.49
SLFN11-209ENST00000589562 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
SLFN11-209ENST00000589562 THSD4Q6ZMP0 1018 aa11.95□□□□□ -0.5
SLFN11-209ENST00000589562 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 MYSM1Q5VVJ2 828 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 HLA-CQ95604 372 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 WBP1LQ9NX94 342 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 PCDH10Q9P2E7 1040 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
SLFN11-209ENST00000589562 TSR3Q9UJK0 312 aaKnown RBP11.92□□□□□ -0.5
SLFN11-209ENST00000589562 KDM4AO75164 1064 aa11.91□□□□□ -0.5
SLFN11-209ENST00000589562 APLP1P51693 650 aa11.91□□□□□ -0.5
SLFN11-209ENST00000589562 PPP4CP60510 307 aa11.91□□□□□ -0.5
SLFN11-209ENST00000589562 RSPH4AQ5TD94 716 aa11.91□□□□□ -0.5
SLFN11-209ENST00000589562 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
SLFN11-209ENST00000589562 POLR3EQ9NVU0 708 aa11.91□□□□□ -0.5
SLFN11-209ENST00000589562 NDUFV2P19404 249 aa11.9□□□□□ -0.5
SLFN11-209ENST00000589562 GUCA2AQ02747 115 aa11.9□□□□□ -0.5
SLFN11-209ENST00000589562 SH3D19Q5HYK7 790 aa11.9□□□□□ -0.5
SLFN11-209ENST00000589562 MOXD2PA6NHM9 499 aa11.89□□□□□ -0.51
SLFN11-209ENST00000589562 PTPN5P54829 565 aa11.89□□□□□ -0.51
SLFN11-209ENST00000589562 FUT2Q10981 343 aa11.89□□□□□ -0.51
SLFN11-209ENST00000589562 PROCA1Q8NCQ7 364 aaPredicted RBP11.88□□□□□ -0.51
SLFN11-209ENST00000589562 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
SLFN11-209ENST00000589562 HOXA2O43364 376 aa11.87□□□□□ -0.51
SLFN11-209ENST00000589562 PUS10Q3MIT2 529 aaKnown RBP11.87□□□□□ -0.51
SLFN11-209ENST00000589562 KMT5BQ4FZB7 885 aa11.86□□□□□ -0.51
SLFN11-209ENST00000589562 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
SLFN11-209ENST00000589562 SKIV2LQ15477 1246 aaKnown RBP11.85□□□□□ -0.51
SLFN11-209ENST00000589562 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
SLFN11-209ENST00000589562 RSPH6AQ9H0K4 717 aa11.85□□□□□ -0.51
SLFN11-209ENST00000589562 CLK2P49760 499 aaKnown RBP11.84□□□□□ -0.51
SLFN11-209ENST00000589562 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
SLFN11-209ENST00000589562 RIC3Q7Z5B4 369 aa11.84□□□□□ -0.51
SLFN11-209ENST00000589562 RNF166Q96A37 237 aaPredicted RBP11.84□□□□□ -0.51
SLFN11-209ENST00000589562 CSPP1Q1MSJ5 1256 aa11.83□□□□□ -0.52
SLFN11-209ENST00000589562 PCDHB15Q9Y5E8 787 aa11.83□□□□□ -0.52
SLFN11-209ENST00000589562 SPTLC1O15269 473 aa11.82□□□□□ -0.52
SLFN11-209ENST00000589562 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
SLFN11-209ENST00000589562 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
SLFN11-209ENST00000589562 PCDHGC3Q9UN70 934 aa11.82□□□□□ -0.52
SLFN11-209ENST00000589562 USP46P62068 366 aa11.81□□□□□ -0.52
SLFN11-209ENST00000589562 DIXDC1Q155Q3 683 aa11.81□□□□□ -0.52
SLFN11-209ENST00000589562 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
SLFN11-209ENST00000589562 ATP6V1AP38606 617 aa11.8□□□□□ -0.52
SLFN11-209ENST00000589562 ATP1B4Q9UN42 357 aaPredicted RBP11.8□□□□□ -0.52
SLFN11-209ENST00000589562 FDX1P10109 184 aa11.79□□□□□ -0.52
SLFN11-209ENST00000589562 MORN1Q5T089 497 aa11.79□□□□□ -0.52
SLFN11-209ENST00000589562 BLOC1S3Q6QNY0 202 aa11.79□□□□□ -0.52
SLFN11-209ENST00000589562 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
SLFN11-209ENST00000589562 MMRN1Q13201 1228 aa11.78□□□□□ -0.52
SLFN11-209ENST00000589562 QPCTQ16769 361 aa11.78□□□□□ -0.52
SLFN11-209ENST00000589562 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
SLFN11-209ENST00000589562 SLC27A5Q9Y2P5 690 aa11.78□□□□□ -0.52
SLFN11-209ENST00000589562 PCDHB3Q9Y5E6 796 aa11.78□□□□□ -0.52
SLFN11-209ENST00000589562 COPS2P61201 443 aa11.77□□□□□ -0.53
SLFN11-209ENST00000589562 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
SLFN11-209ENST00000589562 PRR14Q9BWN1 585 aa11.77□□□□□ -0.53
SLFN11-209ENST00000589562 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
SLFN11-209ENST00000589562 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
SLFN11-209ENST00000589562 GTF3C3Q9Y5Q9 886 aa11.74□□□□□ -0.53
SLFN11-209ENST00000589562 MTRQ99707 1265 aa11.73□□□□□ -0.53
SLFN11-209ENST00000589562 LILRB3O75022 631 aa11.72□□□□□ -0.53
SLFN11-209ENST00000589562 HRCP23327 699 aa11.72□□□□□ -0.53
SLFN11-209ENST00000589562 GJA5P36382 358 aa11.72□□□□□ -0.53
SLFN11-209ENST00000589562 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
SLFN11-209ENST00000589562 RTL5Q5HYW3 569 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms