RNA–Protein interactions for RNA: ENST00000589562.1

SLFN11-209, Transcript of schlafen family member 11, humanhuman

TSL 3

Gene SLFN11, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLFN11-209ENST00000589562 AEBP2Q6ZN18 517 aaPredicted RBP28.35■■■□□ 2.13
SLFN11-209ENST00000589562 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
SLFN11-209ENST00000589562 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
SLFN11-209ENST00000589562 SENP3Q9H4L4 574 aaPredicted RBP23.86■■□□□ 1.41
SLFN11-209ENST00000589562 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
SLFN11-209ENST00000589562 FOXD1Q16676 465 aa22.23■■□□□ 1.15
SLFN11-209ENST00000589562 PPP6R1Q9UPN7 881 aa21.61■■□□□ 1.05
SLFN11-209ENST00000589562 ADRA2BP18089 450 aa21.59■■□□□ 1.05
SLFN11-209ENST00000589562 PIAS4Q8N2W9 510 aaPredicted RBP20.98■□□□□ 0.95
SLFN11-209ENST00000589562 MSH5O43196 834 aa20.28■□□□□ 0.84
SLFN11-209ENST00000589562 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
SLFN11-209ENST00000589562 KCNA4P22459 653 aa19.84■□□□□ 0.77
SLFN11-209ENST00000589562 MAPK8IP2Q13387 824 aaPredicted RBP19.56■□□□□ 0.72
SLFN11-209ENST00000589562 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
SLFN11-209ENST00000589562 NCBP3Q53F19 620 aaKnown RBP19.41■□□□□ 0.7
SLFN11-209ENST00000589562 CNKSR2Q8WXI2 1034 aa19.33■□□□□ 0.68
SLFN11-209ENST00000589562 NPM3O75607 178 aaKnown RBP19.28■□□□□ 0.68
SLFN11-209ENST00000589562 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
SLFN11-209ENST00000589562 RNF216Q9NWF9 866 aaPredicted RBP18.9■□□□□ 0.62
SLFN11-209ENST00000589562 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
SLFN11-209ENST00000589562 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
SLFN11-209ENST00000589562 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
SLFN11-209ENST00000589562 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
SLFN11-209ENST00000589562 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
SLFN11-209ENST00000589562 ZBTB22O15209 634 aa18.31■□□□□ 0.52
SLFN11-209ENST00000589562 CSRNP3Q8WYN3 585 aa18.3■□□□□ 0.52
SLFN11-209ENST00000589562 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
SLFN11-209ENST00000589562 SLC4A2P04920 1241 aa18.18■□□□□ 0.5
SLFN11-209ENST00000589562 FOXD4L1Q9NU39 408 aa18.1■□□□□ 0.49
SLFN11-209ENST00000589562 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.46
SLFN11-209ENST00000589562 MYCNP04198 464 aaPredicted RBP17.73■□□□□ 0.43
SLFN11-209ENST00000589562 U3KPZ7 1027 aaPredicted RBP17.71■□□□□ 0.43
SLFN11-209ENST00000589562 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
SLFN11-209ENST00000589562 ATF5Q9Y2D1 282 aaPredicted RBP17.4■□□□□ 0.38
SLFN11-209ENST00000589562 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
SLFN11-209ENST00000589562 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
SLFN11-209ENST00000589562 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
SLFN11-209ENST00000589562 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
SLFN11-209ENST00000589562 C1QBPQ07021 282 aaKnown RBP17.2■□□□□ 0.34
SLFN11-209ENST00000589562 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
SLFN11-209ENST00000589562 APLP2Q06481 763 aa17.11■□□□□ 0.33
SLFN11-209ENST00000589562 CAPN15O75808 1086 aa17.04■□□□□ 0.32
SLFN11-209ENST00000589562 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
SLFN11-209ENST00000589562 ZNF219Q9P2Y4 722 aaPredicted RBP16.99■□□□□ 0.31
SLFN11-209ENST00000589562 CACNB1Q02641 598 aaPredicted RBP16.86■□□□□ 0.29
SLFN11-209ENST00000589562 ABCB7O75027 752 aa16.82■□□□□ 0.28
SLFN11-209ENST00000589562 POLA2Q14181 598 aa16.79■□□□□ 0.28
SLFN11-209ENST00000589562 DSG3P32926 999 aa16.72■□□□□ 0.27
SLFN11-209ENST00000589562 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
SLFN11-209ENST00000589562 FKBP8Q14318 412 aa16.52■□□□□ 0.24
SLFN11-209ENST00000589562 FBLN2P98095 1184 aa16.46■□□□□ 0.23
SLFN11-209ENST00000589562 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
SLFN11-209ENST00000589562 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
SLFN11-209ENST00000589562 OSCARQ8IYS5 282 aa16.25■□□□□ 0.19
SLFN11-209ENST00000589562 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
SLFN11-209ENST00000589562 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
SLFN11-209ENST00000589562 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
SLFN11-209ENST00000589562 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
SLFN11-209ENST00000589562 PROM2Q8N271 834 aa16.02■□□□□ 0.16
SLFN11-209ENST00000589562 SSUH2Q9Y2M2 353 aa15.97■□□□□ 0.15
SLFN11-209ENST00000589562 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
SLFN11-209ENST00000589562 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
SLFN11-209ENST00000589562 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
SLFN11-209ENST00000589562 AKT1S1Q96B36 256 aa15.69■□□□□ 0.1
SLFN11-209ENST00000589562 VASPP50552 380 aaPredicted RBP15.63■□□□□ 0.09
SLFN11-209ENST00000589562 REM2Q8IYK8 340 aaPredicted RBP15.61■□□□□ 0.09
SLFN11-209ENST00000589562 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
SLFN11-209ENST00000589562 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
SLFN11-209ENST00000589562 CLEC11AQ9Y240 323 aa15.5■□□□□ 0.07
SLFN11-209ENST00000589562 PITPNM1O00562 1244 aa15.47■□□□□ 0.07
SLFN11-209ENST00000589562 IFNLR1Q8IU57 520 aaPredicted RBP15.47■□□□□ 0.07
SLFN11-209ENST00000589562 RTN4Q9NQC3 1192 aaKnown RBP15.43■□□□□ 0.06
SLFN11-209ENST00000589562 MIER1Q8N108 512 aa15.38■□□□□ 0.05
SLFN11-209ENST00000589562 PLCD3Q8N3E9 789 aa15.38■□□□□ 0.05
SLFN11-209ENST00000589562 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
SLFN11-209ENST00000589562 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
SLFN11-209ENST00000589562 KLHL34Q8N239 644 aa15.28■□□□□ 0.04
SLFN11-209ENST00000589562 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
SLFN11-209ENST00000589562 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
SLFN11-209ENST00000589562 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
SLFN11-209ENST00000589562 SPOCK2Q92563 424 aa15.17■□□□□ 0.02
SLFN11-209ENST00000589562 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
SLFN11-209ENST00000589562 MNX1P50219 401 aaPredicted RBP15.14■□□□□ 0.01
SLFN11-209ENST00000589562 FXR2P51116 673 aaKnown RBP eCLIP15.08■□□□□ 0
SLFN11-209ENST00000589562 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
SLFN11-209ENST00000589562 PRKAR2AP13861 404 aaKnown RBP15.05■□□□□ -0
SLFN11-209ENST00000589562 PIP4P2Q8N4L2 257 aa15.05■□□□□ -0
SLFN11-209ENST00000589562 PKD2Q13563 968 aa15.04■□□□□ -0
SLFN11-209ENST00000589562 NUBP1P53384 320 aa15.01□□□□□ -0.01
SLFN11-209ENST00000589562 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
SLFN11-209ENST00000589562 RASEFQ8IZ41 740 aa14.94□□□□□ -0.02
SLFN11-209ENST00000589562 CIZ1Q9ULV3 898 aaPredicted RBP14.94□□□□□ -0.02
SLFN11-209ENST00000589562 NPM1P06748 294 aaKnown RBP eCLIP14.89□□□□□ -0.03
SLFN11-209ENST00000589562 ECM2O94769 699 aaPredicted RBP14.87□□□□□ -0.03
SLFN11-209ENST00000589562 DCAF8Q5TAQ9 597 aa14.85□□□□□ -0.03
SLFN11-209ENST00000589562 FAM212AQ96EL1 285 aa14.81□□□□□ -0.04
SLFN11-209ENST00000589562 GSE1Q14687 1217 aa14.8□□□□□ -0.04
SLFN11-209ENST00000589562 TSPYL2Q9H2G4 693 aaPredicted RBP14.78□□□□□ -0.04
SLFN11-209ENST00000589562 RGL2O15211 777 aa14.77□□□□□ -0.05
SLFN11-209ENST00000589562 DCAF8L2P0C7V8 631 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms