RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
DNMT1-218ENST00000589294 TXNDC2Q86VQ3 553 aa17.57■□□□□ 0.4
DNMT1-218ENST00000589294 SLIT1O75093 1534 aa17.57■□□□□ 0.4
DNMT1-218ENST00000589294 ARHGAP23Q9P227 1491 aa17.56■□□□□ 0.4
DNMT1-218ENST00000589294 HSPA2P54652 639 aa17.56■□□□□ 0.4
DNMT1-218ENST00000589294 L3MBTL2Q969R5 705 aa17.56■□□□□ 0.4
DNMT1-218ENST00000589294 RIMS2Q9UQ26 1411 aa17.55■□□□□ 0.4
DNMT1-218ENST00000589294 LTKP29376 864 aa17.55■□□□□ 0.4
DNMT1-218ENST00000589294 DCAF11Q8TEB1 546 aa17.55■□□□□ 0.4
DNMT1-218ENST00000589294 ZFYVE9O95405 1425 aa17.55■□□□□ 0.4
DNMT1-218ENST00000589294 TONSLQ96HA7 1378 aa17.53■□□□□ 0.4
DNMT1-218ENST00000589294 PPP1R15AO75807 674 aaPredicted RBP17.53■□□□□ 0.4
DNMT1-218ENST00000589294 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.4
DNMT1-218ENST00000589294 KDM2AQ9Y2K7 1162 aa17.51■□□□□ 0.39
DNMT1-218ENST00000589294 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
DNMT1-218ENST00000589294 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
DNMT1-218ENST00000589294 NCKAP5LQ9HCH0 1330 aa17.5■□□□□ 0.39
DNMT1-218ENST00000589294 NUTM2DQ5VT03 806 aaPredicted RBP17.5■□□□□ 0.39
DNMT1-218ENST00000589294 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
DNMT1-218ENST00000589294 PLEKHG1Q9ULL1 1385 aa17.48■□□□□ 0.39
DNMT1-218ENST00000589294 ADGRF5Q8IZF2 1346 aa17.47■□□□□ 0.39
DNMT1-218ENST00000589294 MED14O60244 1454 aa17.47■□□□□ 0.39
DNMT1-218ENST00000589294 MYOM2P54296 1465 aa17.46■□□□□ 0.39
DNMT1-218ENST00000589294 BCANQ96GW7 911 aa17.46■□□□□ 0.39
DNMT1-218ENST00000589294 PPLO60437 1756 aa17.45■□□□□ 0.38
DNMT1-218ENST00000589294 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
DNMT1-218ENST00000589294 TBX22Q9Y458 520 aa17.44■□□□□ 0.38
DNMT1-218ENST00000589294 NPHP4O75161 1426 aaPredicted RBP17.44■□□□□ 0.38
DNMT1-218ENST00000589294 IFT172Q9UG01 1749 aa17.44■□□□□ 0.38
DNMT1-218ENST00000589294 C14orf93Q9H972 538 aaKnown RBP17.43■□□□□ 0.38
DNMT1-218ENST00000589294 STRCQ7RTU9 1775 aa17.41■□□□□ 0.38
DNMT1-218ENST00000589294 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
DNMT1-218ENST00000589294 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
DNMT1-218ENST00000589294 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
DNMT1-218ENST00000589294 SLC26A8Q96RN1 970 aa17.4■□□□□ 0.38
DNMT1-218ENST00000589294 POLR1AO95602 1720 aaPredicted RBP17.39■□□□□ 0.37
DNMT1-218ENST00000589294 CFAP70Q5T0N1 1121 aa17.39■□□□□ 0.37
DNMT1-218ENST00000589294 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
DNMT1-218ENST00000589294 NBPF8Q3BBV2 869 aa17.38■□□□□ 0.37
DNMT1-218ENST00000589294 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
DNMT1-218ENST00000589294 SENP3Q9H4L4 574 aaPredicted RBP17.37■□□□□ 0.37
DNMT1-218ENST00000589294 PIK3R4Q99570 1358 aa17.36■□□□□ 0.37
DNMT1-218ENST00000589294 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
DNMT1-218ENST00000589294 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
DNMT1-218ENST00000589294 DIP2AQ14689 1571 aa17.34■□□□□ 0.37
DNMT1-218ENST00000589294 NRXN3Q9Y4C0 1643 aa17.33■□□□□ 0.37
DNMT1-218ENST00000589294 METP08581 1390 aa17.32■□□□□ 0.36
DNMT1-218ENST00000589294 KCNA6P17658 529 aa17.32■□□□□ 0.36
DNMT1-218ENST00000589294 NBPF1Q3BBV0 1214 aa17.32■□□□□ 0.36
DNMT1-218ENST00000589294 TMEM132EQ6IEE7 984 aa17.32■□□□□ 0.36
DNMT1-218ENST00000589294 KIAA1210Q9ULL0 1709 aa17.3■□□□□ 0.36
DNMT1-218ENST00000589294 LAMC1P11047 1609 aa17.3■□□□□ 0.36
DNMT1-218ENST00000589294 AMOTL2Q9Y2J4 779 aa17.29■□□□□ 0.36
DNMT1-218ENST00000589294 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
DNMT1-218ENST00000589294 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
DNMT1-218ENST00000589294 LRPPRCP42704 1394 aaKnown RBP17.28■□□□□ 0.36
DNMT1-218ENST00000589294 GPRASP1Q5JY77 1395 aa17.28■□□□□ 0.36
DNMT1-218ENST00000589294 ABCC11Q96J66 1382 aa17.28■□□□□ 0.36
DNMT1-218ENST00000589294 RALGAPBQ86X10 1494 aa17.27■□□□□ 0.36
DNMT1-218ENST00000589294 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
DNMT1-218ENST00000589294 TRPM1Q7Z4N2 1603 aa17.26■□□□□ 0.35
DNMT1-218ENST00000589294 STK26Q9P289 416 aa17.26■□□□□ 0.35
DNMT1-218ENST00000589294 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
DNMT1-218ENST00000589294 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
DNMT1-218ENST00000589294 SETD1AO15047 1707 aaKnown RBP17.26■□□□□ 0.35
DNMT1-218ENST00000589294 PTPRUQ92729 1446 aa17.25■□□□□ 0.35
DNMT1-218ENST00000589294 ZNF335Q9H4Z2 1342 aaPredicted RBP17.23■□□□□ 0.35
DNMT1-218ENST00000589294 TRAK1Q9UPV9 953 aa17.23■□□□□ 0.35
DNMT1-218ENST00000589294 CHD2O14647 1828 aaKnown RBP17.23■□□□□ 0.35
DNMT1-218ENST00000589294 TECPR2O15040 1411 aa17.22■□□□□ 0.35
DNMT1-218ENST00000589294 ASXL1Q8IXJ9 1541 aa17.22■□□□□ 0.35
DNMT1-218ENST00000589294 PROSER2Q86WR7 435 aaPredicted RBP17.21■□□□□ 0.35
DNMT1-218ENST00000589294 FAM135BQ49AJ0 1406 aa17.2■□□□□ 0.34
DNMT1-218ENST00000589294 POGKQ9P215 609 aa17.19■□□□□ 0.34
DNMT1-218ENST00000589294 PTCH1Q13635 1447 aa17.19■□□□□ 0.34
DNMT1-218ENST00000589294 NWD1Q149M9 1564 aa17.19■□□□□ 0.34
DNMT1-218ENST00000589294 NKTRP30414 1462 aaKnown RBP17.18■□□□□ 0.34
DNMT1-218ENST00000589294 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
DNMT1-218ENST00000589294 DLC1Q96QB1 1528 aa17.18■□□□□ 0.34
DNMT1-218ENST00000589294 EIF3AQ14152 1382 aaKnown RBP17.17■□□□□ 0.34
DNMT1-218ENST00000589294 WAPLQ7Z5K2 1190 aa17.17■□□□□ 0.34
DNMT1-218ENST00000589294 XRN1Q8IZH2 1706 aaKnown RBP17.17■□□□□ 0.34
DNMT1-218ENST00000589294 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
DNMT1-218ENST00000589294 NCOA3Q9Y6Q9 1424 aa17.17■□□□□ 0.34
DNMT1-218ENST00000589294 CPS1P31327 1500 aa17.16■□□□□ 0.34
DNMT1-218ENST00000589294 SLC24A1O60721 1099 aa17.16■□□□□ 0.34
DNMT1-218ENST00000589294 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
DNMT1-218ENST00000589294 CENPJQ9HC77 1338 aaPredicted RBP17.15■□□□□ 0.34
DNMT1-218ENST00000589294 KNDC1Q76NI1 1749 aa17.14■□□□□ 0.33
DNMT1-218ENST00000589294 LTBP4Q8N2S1 1624 aa17.14■□□□□ 0.33
DNMT1-218ENST00000589294 USP47Q96K76 1375 aa17.14■□□□□ 0.33
DNMT1-218ENST00000589294 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
DNMT1-218ENST00000589294 ST20-MTHFSA0A0A6YYL1 179 aa17.13■□□□□ 0.33
DNMT1-218ENST00000589294 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
DNMT1-218ENST00000589294 LRRC7Q96NW7 1537 aa17.12■□□□□ 0.33
DNMT1-218ENST00000589294 C19orf44Q9H6X5 657 aa17.12■□□□□ 0.33
DNMT1-218ENST00000589294 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
DNMT1-218ENST00000589294 SAFB2Q14151 953 aaKnown RBP eCLIP17.1■□□□□ 0.33
DNMT1-218ENST00000589294 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
DNMT1-218ENST00000589294 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms