RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 FMN1Q68DA7 1419 aa9.14□□□□□ -0.95
LINC01539-202ENST00000589293 SCAPERQ9BY12 1400 aa9.14□□□□□ -0.95
LINC01539-202ENST00000589293 CLIP1P30622 1438 aa9.14□□□□□ -0.95
LINC01539-202ENST00000589293 HSPA2P54652 639 aa9.13□□□□□ -0.95
LINC01539-202ENST00000589293 BCANQ96GW7 911 aa9.13□□□□□ -0.95
LINC01539-202ENST00000589293 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.13□□□□□ -0.95
LINC01539-202ENST00000589293 RICTORQ6R327 1708 aa9.13□□□□□ -0.95
LINC01539-202ENST00000589293 TTC37Q6PGP7 1564 aa9.12□□□□□ -0.95
LINC01539-202ENST00000589293 CDK13Q14004 1512 aaKnown RBP9.12□□□□□ -0.95
LINC01539-202ENST00000589293 ZMYM4Q5VZL5 1548 aa9.12□□□□□ -0.95
LINC01539-202ENST00000589293 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
LINC01539-202ENST00000589293 LMTK3Q96Q04 1460 aa9.12□□□□□ -0.95
LINC01539-202ENST00000589293 PLCH2O75038 1416 aa9.12□□□□□ -0.95
LINC01539-202ENST00000589293 HECW1Q76N89 1606 aa9.12□□□□□ -0.95
LINC01539-202ENST00000589293 ARHGEF1Q92888 912 aaKnown RBP9.11□□□□□ -0.95
LINC01539-202ENST00000589293 YEATS2Q9ULM3 1422 aa9.11□□□□□ -0.95
LINC01539-202ENST00000589293 OTUD5Q96G74 571 aa9.1□□□□□ -0.95
LINC01539-202ENST00000589293 C9orf84Q5VXU9 1444 aa9.1□□□□□ -0.95
LINC01539-202ENST00000589293 ARHGAP5Q13017 1502 aa9.1□□□□□ -0.95
LINC01539-202ENST00000589293 KIF14Q15058 1648 aa9.09□□□□□ -0.95
LINC01539-202ENST00000589293 ATP10AO60312 1499 aa9.09□□□□□ -0.95
LINC01539-202ENST00000589293 FER1L4A9Z1Z3 1794 aa9.09□□□□□ -0.95
LINC01539-202ENST00000589293 ZNF518AQ6AHZ1 1483 aa9.08□□□□□ -0.96
LINC01539-202ENST00000589293 MYO5CQ9NQX4 1742 aa9.08□□□□□ -0.96
LINC01539-202ENST00000589293 DPYSL4O14531 572 aa9.08□□□□□ -0.96
LINC01539-202ENST00000589293 LHX8Q68G74 356 aa9.08□□□□□ -0.96
LINC01539-202ENST00000589293 CERKQ8TCT0 537 aa9.08□□□□□ -0.96
LINC01539-202ENST00000589293 OXER1Q8TDS5 423 aa9.07□□□□□ -0.96
LINC01539-202ENST00000589293 TROQ12816 1431 aaPredicted RBP9.06□□□□□ -0.96
LINC01539-202ENST00000589293 SEMA3EO15041 775 aa9.06□□□□□ -0.96
LINC01539-202ENST00000589293 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
LINC01539-202ENST00000589293 AFAP1Q8N556 730 aa9.06□□□□□ -0.96
LINC01539-202ENST00000589293 SLAIN1Q8ND83 568 aa9.06□□□□□ -0.96
LINC01539-202ENST00000589293 UHRF1BP1Q6BDS2 1440 aa9.05□□□□□ -0.96
LINC01539-202ENST00000589293 CEBPAP49715 358 aaPredicted RBP9.05□□□□□ -0.96
LINC01539-202ENST00000589293 UPF1Q92900 1129 aaKnown RBP eCLIP9.05□□□□□ -0.96
LINC01539-202ENST00000589293 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
LINC01539-202ENST00000589293 NBR1Q14596 966 aa9.04□□□□□ -0.96
LINC01539-202ENST00000589293 SCUBE2Q9NQ36 999 aa9.04□□□□□ -0.96
LINC01539-202ENST00000589293 ARHGEF12Q9NZN5 1544 aa9.04□□□□□ -0.96
LINC01539-202ENST00000589293 PREX1Q8TCU6 1659 aa9.04□□□□□ -0.96
LINC01539-202ENST00000589293 CCDC18Q5T9S5 1454 aa9.03□□□□□ -0.96
LINC01539-202ENST00000589293 PDIA6Q15084 440 aa9.03□□□□□ -0.96
LINC01539-202ENST00000589293 PTCD2Q8WV60 388 aaKnown RBP9.03□□□□□ -0.96
LINC01539-202ENST00000589293 ZNF777Q9ULD5 760 aaPredicted RBP9.03□□□□□ -0.96
LINC01539-202ENST00000589293 SLC34A2O95436 690 aa9.02□□□□□ -0.97
LINC01539-202ENST00000589293 MAMSTRQ6ZN01 415 aa9.02□□□□□ -0.97
LINC01539-202ENST00000589293 TESPA1A2RU30 521 aaPredicted RBP9.01□□□□□ -0.97
LINC01539-202ENST00000589293 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
LINC01539-202ENST00000589293 MLH3Q9UHC1 1453 aa9□□□□□ -0.97
LINC01539-202ENST00000589293 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
LINC01539-202ENST00000589293 KDM5CP41229 1560 aa8.99□□□□□ -0.97
LINC01539-202ENST00000589293 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
LINC01539-202ENST00000589293 CNTLNQ9NXG0 1405 aa8.99□□□□□ -0.97
LINC01539-202ENST00000589293 SPAG9O60271 1321 aaKnown RBP8.99□□□□□ -0.97
LINC01539-202ENST00000589293 DIP2CQ9Y2E4 1556 aa8.99□□□□□ -0.97
LINC01539-202ENST00000589293 DISP3Q9P2K9 1392 aa8.99□□□□□ -0.97
LINC01539-202ENST00000589293 TRAPPC8Q9Y2L5 1435 aa8.98□□□□□ -0.97
LINC01539-202ENST00000589293 SETD1BQ9UPS6 1966 aaKnown RBP8.98□□□□□ -0.97
LINC01539-202ENST00000589293 REREQ9P2R6 1566 aa8.98□□□□□ -0.97
LINC01539-202ENST00000589293 PREX2Q70Z35 1606 aa8.98□□□□□ -0.97
LINC01539-202ENST00000589293 KHSRPQ92945 711 aaKnown RBP eCLIP8.97□□□□□ -0.97
LINC01539-202ENST00000589293 CFDP1Q9UEE9 299 aaPredicted RBP8.97□□□□□ -0.97
LINC01539-202ENST00000589293 PCDHGA4Q9Y5G9 962 aa8.97□□□□□ -0.97
LINC01539-202ENST00000589293 ABCC1P33527 1531 aa8.96□□□□□ -0.97
LINC01539-202ENST00000589293 AGLP35573 1532 aa8.96□□□□□ -0.97
LINC01539-202ENST00000589293 ABCA6Q8N139 1617 aa8.96□□□□□ -0.98
LINC01539-202ENST00000589293 MAP3K9P80192 1104 aa8.96□□□□□ -0.98
LINC01539-202ENST00000589293 CDC42BPBQ9Y5S2 1711 aa8.96□□□□□ -0.98
LINC01539-202ENST00000589293 CCNB3Q8WWL7 1395 aa8.96□□□□□ -0.98
LINC01539-202ENST00000589293 PTPRTO14522 1441 aa8.96□□□□□ -0.98
LINC01539-202ENST00000589293 FYCO1Q9BQS8 1478 aa8.96□□□□□ -0.98
LINC01539-202ENST00000589293 ITSN2Q9NZM3 1697 aa8.95□□□□□ -0.98
LINC01539-202ENST00000589293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC01539-202ENST00000589293 MTUS2Q5JR59 1369 aa8.95□□□□□ -0.98
LINC01539-202ENST00000589293 PLEKHH2Q8IVE3 1493 aa8.95□□□□□ -0.98
LINC01539-202ENST00000589293 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
LINC01539-202ENST00000589293 EVI5O60447 810 aa8.94□□□□□ -0.98
LINC01539-202ENST00000589293 PRKCSHP14314 528 aaPredicted RBP8.94□□□□□ -0.98
LINC01539-202ENST00000589293 HNRNPMP52272 730 aaKnown RBP eCLIP8.94□□□□□ -0.98
LINC01539-202ENST00000589293 GPR153Q6NV75 609 aa8.94□□□□□ -0.98
LINC01539-202ENST00000589293 GGT6Q6P531 493 aa8.94□□□□□ -0.98
LINC01539-202ENST00000589293 C3P01024 1663 aa8.94□□□□□ -0.98
LINC01539-202ENST00000589293 PRIM1P49642 420 aaKnown RBP8.93□□□□□ -0.98
LINC01539-202ENST00000589293 ANO8Q9HCE9 1232 aaPredicted RBP8.93□□□□□ -0.98
LINC01539-202ENST00000589293 LRRIQ1Q96JM4 1722 aa8.92□□□□□ -0.98
LINC01539-202ENST00000589293 SYCP2Q9BX26 1530 aa8.92□□□□□ -0.98
LINC01539-202ENST00000589293 NPATQ14207 1427 aa8.92□□□□□ -0.98
LINC01539-202ENST00000589293 ZMYM3Q14202 1370 aa8.92□□□□□ -0.98
LINC01539-202ENST00000589293 ARSIQ5FYB1 569 aa8.92□□□□□ -0.98
LINC01539-202ENST00000589293 STRCQ7RTU9 1775 aa8.91□□□□□ -0.98
LINC01539-202ENST00000589293 CDC42BPAQ5VT25 1732 aa8.91□□□□□ -0.98
LINC01539-202ENST00000589293 SAMD9LQ8IVG5 1584 aa8.91□□□□□ -0.98
LINC01539-202ENST00000589293 PTGER2P43116 358 aa8.91□□□□□ -0.98
LINC01539-202ENST00000589293 LMOD2Q6P5Q4 547 aa8.91□□□□□ -0.98
LINC01539-202ENST00000589293 KIDINS220Q9ULH0 1771 aa8.91□□□□□ -0.98
LINC01539-202ENST00000589293 ATP7AQ04656 1500 aa8.9□□□□□ -0.98
LINC01539-202ENST00000589293 GPATCH8Q9UKJ3 1502 aaKnown RBP8.9□□□□□ -0.98
LINC01539-202ENST00000589293 NCOA1Q15788 1441 aa8.9□□□□□ -0.98
LINC01539-202ENST00000589293 KIAA1107Q9UPP5 1409 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms