RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 MINK1Q8N4C8 1332 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-207ENST00000589285 GUCA2AQ02747 115 aa6.48□□□□□ -1.37
ZNF540-207ENST00000589285 WNT2BQ93097 391 aa6.48□□□□□ -1.37
ZNF540-207ENST00000589285 AK7Q96M32 723 aa6.48□□□□□ -1.37
ZNF540-207ENST00000589285 NBPF26B4DH59 902 aa6.47□□□□□ -1.37
ZNF540-207ENST00000589285 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
ZNF540-207ENST00000589285 CERKQ8TCT0 537 aa6.47□□□□□ -1.37
ZNF540-207ENST00000589285 TMEM134Q9H6X4 195 aa6.47□□□□□ -1.37
ZNF540-207ENST00000589285 MYT1LQ9UL68 1186 aa6.47□□□□□ -1.37
ZNF540-207ENST00000589285 KDM4CQ9H3R0 1056 aa6.47□□□□□ -1.37
ZNF540-207ENST00000589285 RBM46Q8TBY0 533 aaKnown RBP6.46□□□□□ -1.37
ZNF540-207ENST00000589285 RNF166Q96A37 237 aaPredicted RBP6.46□□□□□ -1.37
ZNF540-207ENST00000589285 NBPF3Q9H094 633 aa6.46□□□□□ -1.37
ZNF540-207ENST00000589285 GOLGA8CPA6NN73 597 aa6.45□□□□□ -1.38
ZNF540-207ENST00000589285 RDH13Q8NBN7 331 aa6.45□□□□□ -1.38
ZNF540-207ENST00000589285 HPS5Q9UPZ3 1129 aa6.45□□□□□ -1.38
ZNF540-207ENST00000589285 CSPP1Q1MSJ5 1256 aa6.44□□□□□ -1.38
ZNF540-207ENST00000589285 FBXO31Q5XUX0 539 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-207ENST00000589285 TK2O00142 265 aa6.44□□□□□ -1.38
ZNF540-207ENST00000589285 SSTR3P32745 418 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-207ENST00000589285 APLP1P51693 650 aa6.44□□□□□ -1.38
ZNF540-207ENST00000589285 SYMPKQ92797 1274 aaKnown RBP6.44□□□□□ -1.38
ZNF540-207ENST00000589285 STAC3Q96MF2 364 aa6.44□□□□□ -1.38
ZNF540-207ENST00000589285 RBM27Q9P2N5 1060 aaKnown RBP6.44□□□□□ -1.38
ZNF540-207ENST00000589285 DNAJB2P25686 324 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 BEGAINQ9BUH8 593 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 FUT2Q10981 343 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 OATP04181 439 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 COPS2P61201 443 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 THSD4Q6ZMP0 1018 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 POLR3EQ9NVU0 708 aa6.43□□□□□ -1.38
ZNF540-207ENST00000589285 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.43□□□□□ -1.38
ZNF540-207ENST00000589285 PLEKHG3A1L390 1219 aa6.42□□□□□ -1.38
ZNF540-207ENST00000589285 GPCPD1Q9NPB8 672 aa6.42□□□□□ -1.38
ZNF540-207ENST00000589285 FAM217BQ9NTX9 383 aaPredicted RBP6.42□□□□□ -1.38
ZNF540-207ENST00000589285 LRCH3Q96II8 777 aa6.42□□□□□ -1.38
ZNF540-207ENST00000589285 ZNF516Q92618 1163 aa6.41□□□□□ -1.38
ZNF540-207ENST00000589285 SLC4A5Q9BY07 1137 aa6.41□□□□□ -1.38
ZNF540-207ENST00000589285 NDUFV2P19404 249 aa6.41□□□□□ -1.38
ZNF540-207ENST00000589285 AMHR2Q16671 573 aa6.41□□□□□ -1.38
ZNF540-207ENST00000589285 SOWAHBA6NEL2 793 aa6.41□□□□□ -1.38
ZNF540-207ENST00000589285 CFHP08603 1231 aa6.41□□□□□ -1.38
ZNF540-207ENST00000589285 ANKK1Q8NFD2 765 aa6.4□□□□□ -1.38
ZNF540-207ENST00000589285 TMUB1Q9BVT8 246 aa6.4□□□□□ -1.39
ZNF540-207ENST00000589285 TLL1O43897 1013 aa6.39□□□□□ -1.39
ZNF540-207ENST00000589285 NKX2-3Q8TAU0 364 aa6.39□□□□□ -1.39
ZNF540-207ENST00000589285 DAXXQ9UER7 740 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-207ENST00000589285 PROCA1Q8NCQ7 364 aaPredicted RBP6.39□□□□□ -1.39
ZNF540-207ENST00000589285 PCDHB15Q9Y5E8 787 aa6.38□□□□□ -1.39
ZNF540-207ENST00000589285 MOXD2PA6NHM9 499 aa6.38□□□□□ -1.39
ZNF540-207ENST00000589285 CLCN1P35523 988 aa6.38□□□□□ -1.39
ZNF540-207ENST00000589285 MYO15BQ96JP2 1530 aa6.38□□□□□ -1.39
ZNF540-207ENST00000589285 PPP4CP60510 307 aa6.37□□□□□ -1.39
ZNF540-207ENST00000589285 ATP1B4Q9UN42 357 aaPredicted RBP6.37□□□□□ -1.39
ZNF540-207ENST00000589285 QPCTQ16769 361 aa6.37□□□□□ -1.39
ZNF540-207ENST00000589285 CD46P15529 392 aa6.36□□□□□ -1.39
ZNF540-207ENST00000589285 BLOC1S3Q6QNY0 202 aa6.36□□□□□ -1.39
ZNF540-207ENST00000589285 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.36□□□□□ -1.39
ZNF540-207ENST00000589285 LIMD1Q9UGP4 676 aa6.36□□□□□ -1.39
ZNF540-207ENST00000589285 RNF19BQ6ZMZ0 732 aa6.36□□□□□ -1.39
ZNF540-207ENST00000589285 PCDHGC3Q9UN70 934 aa6.36□□□□□ -1.39
ZNF540-207ENST00000589285 SPIRE2Q8WWL2 714 aa6.34□□□□□ -1.39
ZNF540-207ENST00000589285 HDGFP51858 240 aaKnown RBP6.34□□□□□ -1.39
ZNF540-207ENST00000589285 TBC1D2Q9BYX2 928 aa6.34□□□□□ -1.39
ZNF540-207ENST00000589285 PRDM9Q9NQV7 894 aa6.34□□□□□ -1.39
ZNF540-207ENST00000589285 SLC27A5Q9Y2P5 690 aa6.34□□□□□ -1.39
ZNF540-207ENST00000589285 CABLES1Q8TDN4 633 aa6.34□□□□□ -1.4
ZNF540-207ENST00000589285 LAPTM4BQ86VI4 370 aa6.33□□□□□ -1.4
ZNF540-207ENST00000589285 TSR3Q9UJK0 312 aaKnown RBP6.33□□□□□ -1.4
ZNF540-207ENST00000589285 KDM4AO75164 1064 aa6.33□□□□□ -1.4
ZNF540-207ENST00000589285 MYSM1Q5VVJ2 828 aa6.33□□□□□ -1.4
ZNF540-207ENST00000589285 SHROOM4Q9ULL8 1493 aa6.33□□□□□ -1.4
ZNF540-207ENST00000589285 GCGRP47871 477 aa6.32□□□□□ -1.4
ZNF540-207ENST00000589285 MTRQ99707 1265 aa6.32□□□□□ -1.4
ZNF540-207ENST00000589285 SLF2Q8IX21 1173 aa6.31□□□□□ -1.4
ZNF540-207ENST00000589285 TSC1Q92574 1164 aa6.31□□□□□ -1.4
ZNF540-207ENST00000589285 PPEF1O14829 653 aaPredicted RBP6.31□□□□□ -1.4
ZNF540-207ENST00000589285 SCUBE3Q8IX30 993 aa6.31□□□□□ -1.4
ZNF540-207ENST00000589285 PCDHB3Q9Y5E6 796 aa6.31□□□□□ -1.4
ZNF540-207ENST00000589285 HOXA2O43364 376 aa6.3□□□□□ -1.4
ZNF540-207ENST00000589285 NUTM1Q86Y26 1132 aa6.29□□□□□ -1.4
ZNF540-207ENST00000589285 SULF1Q8IWU6 871 aa6.29□□□□□ -1.4
ZNF540-207ENST00000589285 TJAP1Q5JTD0 557 aa6.28□□□□□ -1.4
ZNF540-207ENST00000589285 RTL5Q5HYW3 569 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-207ENST00000589285 MORN1Q5T089 497 aa6.28□□□□□ -1.4
ZNF540-207ENST00000589285 FDX1P10109 184 aa6.27□□□□□ -1.41
ZNF540-207ENST00000589285 C6orf229H3BNL8 230 aa6.27□□□□□ -1.41
ZNF540-207ENST00000589285 PER1O15534 1290 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-207ENST00000589285 ACTN4O43707 911 aaKnown RBP6.25□□□□□ -1.41
ZNF540-207ENST00000589285 ATP6V1AP38606 617 aa6.25□□□□□ -1.41
ZNF540-207ENST00000589285 CFAP99D6REC4 459 aa6.25□□□□□ -1.41
ZNF540-207ENST00000589285 S1PR4O95977 384 aa6.25□□□□□ -1.41
ZNF540-207ENST00000589285 HRCP23327 699 aa6.25□□□□□ -1.41
ZNF540-207ENST00000589285 RSBN1LQ6PCB5 846 aaPredicted RBP6.25□□□□□ -1.41
ZNF540-207ENST00000589285 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
ZNF540-207ENST00000589285 CLK2P49760 499 aaKnown RBP6.24□□□□□ -1.41
ZNF540-207ENST00000589285 EPS8L1Q8TE68 723 aa6.24□□□□□ -1.41
ZNF540-207ENST00000589285 HCSTQ9UBK5 93 aa6.24□□□□□ -1.41
ZNF540-207ENST00000589285 ZPR1O75312 459 aa6.23□□□□□ -1.41
ZNF540-207ENST00000589285 FAM160A2Q8N612 972 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms