RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 PPLO60437 1756 aa35.27■■■■□ 3.24
RFX1-205ENST00000589239 UBR1Q8IWV7 1749 aa35.27■■■■□ 3.24
RFX1-205ENST00000589239 ADGRF5Q8IZF2 1346 aa35.27■■■■□ 3.24
RFX1-205ENST00000589239 MYOM2P54296 1465 aa35.26■■■■□ 3.24
RFX1-205ENST00000589239 KDM5AP29375 1690 aaKnown RBP35.24■■■■□ 3.23
RFX1-205ENST00000589239 SETD1BQ9UPS6 1966 aaKnown RBP35.21■■■■□ 3.23
RFX1-205ENST00000589239 CEP170BQ9Y4F5 1589 aaPredicted RBP35.2■■■■□ 3.23
RFX1-205ENST00000589239 VGFO15240 615 aaPredicted RBP35.2■■■■□ 3.22
RFX1-205ENST00000589239 RIMS2Q9UQ26 1411 aa35.19■■■■□ 3.22
RFX1-205ENST00000589239 NRXN1Q9ULB1 1477 aa35.18■■■■□ 3.22
RFX1-205ENST00000589239 TMEM2Q9UHN6 1383 aa35.17■■■■□ 3.22
RFX1-205ENST00000589239 RALGAPBQ86X10 1494 aa35.16■■■■□ 3.22
RFX1-205ENST00000589239 ZFYVE9O95405 1425 aa35.16■■■■□ 3.22
RFX1-205ENST00000589239 TRPM1Q7Z4N2 1603 aa35.14■■■■□ 3.22
RFX1-205ENST00000589239 THEMISQ8N1K5 641 aaPredicted RBP35.14■■■■□ 3.22
RFX1-205ENST00000589239 PIK3C2GO75747 1445 aa35.13■■■■□ 3.21
RFX1-205ENST00000589239 NBPF1Q3BBV0 1214 aa35.12■■■■□ 3.21
RFX1-205ENST00000589239 SENP3Q9H4L4 574 aaPredicted RBP35.12■■■■□ 3.21
RFX1-205ENST00000589239 ZNF142P52746 1687 aaPredicted RBP35.11■■■■□ 3.21
RFX1-205ENST00000589239 ROCK2O75116 1388 aaKnown RBP35.11■■■■□ 3.21
RFX1-205ENST00000589239 CFAP70Q5T0N1 1121 aa35.09■■■■□ 3.21
RFX1-205ENST00000589239 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.09■■■■□ 3.21
RFX1-205ENST00000589239 HDGFP51858 240 aaKnown RBP35.07■■■■□ 3.2
RFX1-205ENST00000589239 SLIT1O75093 1534 aa35.06■■■■□ 3.2
RFX1-205ENST00000589239 ARHGAP23Q9P227 1491 aa35.06■■■■□ 3.2
RFX1-205ENST00000589239 LTKP29376 864 aa35.05■■■■□ 3.2
RFX1-205ENST00000589239 CARD11Q9BXL7 1154 aa35.05■■■■□ 3.2
RFX1-205ENST00000589239 TXNDC2Q86VQ3 553 aa35.03■■■■□ 3.2
RFX1-205ENST00000589239 C14orf93Q9H972 538 aaKnown RBP35.02■■■■□ 3.2
RFX1-205ENST00000589239 GPRASP1Q5JY77 1395 aa35.01■■■■□ 3.2
RFX1-205ENST00000589239 EID1Q9Y6B2 187 aa35.01■■■■□ 3.2
RFX1-205ENST00000589239 KIAA1210Q9ULL0 1709 aa35■■■■□ 3.19
RFX1-205ENST00000589239 HIRIP3Q9BW71 556 aaPredicted RBP34.99■■■■□ 3.19
RFX1-205ENST00000589239 EIF4G2P78344 907 aaKnown RBP eCLIP34.96■■■■□ 3.19
RFX1-205ENST00000589239 USP47Q96K76 1375 aa34.94■■■■□ 3.18
RFX1-205ENST00000589239 HSPA5P11021 654 aaKnown RBP34.94■■■■□ 3.18
RFX1-205ENST00000589239 SCAF11Q99590 1463 aaKnown RBP34.93■■■■□ 3.18
RFX1-205ENST00000589239 TMEM132EQ6IEE7 984 aa34.93■■■■□ 3.18
RFX1-205ENST00000589239 BCANQ96GW7 911 aa34.93■■■■□ 3.18
RFX1-205ENST00000589239 PLEKHG1Q9ULL1 1385 aa34.92■■■■□ 3.18
RFX1-205ENST00000589239 ALKQ9UM73 1620 aa34.91■■■■□ 3.18
RFX1-205ENST00000589239 NRXN3Q9Y4C0 1643 aa34.91■■■■□ 3.18
RFX1-205ENST00000589239 LAMC1P11047 1609 aa34.9■■■■□ 3.18
RFX1-205ENST00000589239 ZNF316A6NFI3 1004 aaPredicted RBP34.9■■■■□ 3.18
RFX1-205ENST00000589239 ADGRB1O14514 1584 aa34.89■■■■□ 3.18
RFX1-205ENST00000589239 SETBP1Q9Y6X0 1596 aa34.89■■■■□ 3.18
RFX1-205ENST00000589239 ANKLE2Q86XL3 938 aa34.89■■■■□ 3.18
RFX1-205ENST00000589239 IQGAP1P46940 1657 aa34.87■■■■□ 3.17
RFX1-205ENST00000589239 ASXL1Q8IXJ9 1541 aa34.85■■■■□ 3.17
RFX1-205ENST00000589239 LMTK3Q96Q04 1460 aa34.84■■■■□ 3.17
RFX1-205ENST00000589239 ADAMTS13Q76LX8 1427 aa34.83■■■■□ 3.17
RFX1-205ENST00000589239 HSPA2P54652 639 aa34.83■■■■□ 3.17
RFX1-205ENST00000589239 SETD1AO15047 1707 aaKnown RBP34.81■■■■□ 3.16
RFX1-205ENST00000589239 ST20-MTHFSA0A0A6YYL1 179 aa34.81■■■■□ 3.16
RFX1-205ENST00000589239 SLC26A8Q96RN1 970 aa34.81■■■■□ 3.16
RFX1-205ENST00000589239 METP08581 1390 aa34.78■■■■□ 3.16
RFX1-205ENST00000589239 TRAK1Q9UPV9 953 aa34.78■■■■□ 3.16
RFX1-205ENST00000589239 SCAF1Q9H7N4 1312 aaKnown RBP34.78■■■■□ 3.16
RFX1-205ENST00000589239 NCKAP5LQ9HCH0 1330 aa34.77■■■■□ 3.16
RFX1-205ENST00000589239 MED14O60244 1454 aa34.75■■■■□ 3.15
RFX1-205ENST00000589239 STK26Q9P289 416 aa34.75■■■■□ 3.15
RFX1-205ENST00000589239 YTHDC2Q9H6S0 1430 aaKnown RBP34.74■■■■□ 3.15
RFX1-205ENST00000589239 POLR1AO95602 1720 aaPredicted RBP34.72■■■■□ 3.15
RFX1-205ENST00000589239 EIF3AQ14152 1382 aaKnown RBP34.71■■■■□ 3.15
RFX1-205ENST00000589239 TBX22Q9Y458 520 aa34.71■■■■□ 3.15
RFX1-205ENST00000589239 NPHP4O75161 1426 aaPredicted RBP34.7■■■■□ 3.15
RFX1-205ENST00000589239 LRPPRCP42704 1394 aaKnown RBP34.67■■■■□ 3.14
RFX1-205ENST00000589239 DIP2AQ14689 1571 aa34.67■■■■□ 3.14
RFX1-205ENST00000589239 TESK2Q96S53 571 aa34.64■■■■□ 3.14
RFX1-205ENST00000589239 C11orf95C9JLR9 678 aaPredicted RBP34.64■■■■□ 3.14
RFX1-205ENST00000589239 ARHGEF28Q8N1W1 1705 aaKnown RBP34.62■■■■□ 3.13
RFX1-205ENST00000589239 ABCC11Q96J66 1382 aa34.62■■■■□ 3.13
RFX1-205ENST00000589239 CENPJQ9HC77 1338 aaPredicted RBP34.61■■■■□ 3.13
RFX1-205ENST00000589239 PTPRUQ92729 1446 aa34.6■■■■□ 3.13
RFX1-205ENST00000589239 PRAM1Q96QH2 718 aa34.57■■■■□ 3.12
RFX1-205ENST00000589239 WASHC2AQ641Q2 1341 aa34.57■■■■□ 3.12
RFX1-205ENST00000589239 SAFB2Q14151 953 aaKnown RBP eCLIP34.56■■■■□ 3.12
RFX1-205ENST00000589239 AMOTL2Q9Y2J4 779 aa34.55■■■■□ 3.12
RFX1-205ENST00000589239 TECPR2O15040 1411 aa34.55■■■■□ 3.12
RFX1-205ENST00000589239 DLC1Q96QB1 1528 aa34.55■■■■□ 3.12
RFX1-205ENST00000589239 POGKQ9P215 609 aa34.54■■■■□ 3.12
RFX1-205ENST00000589239 STRCQ7RTU9 1775 aa34.53■■■■□ 3.12
RFX1-205ENST00000589239 PIK3R4Q99570 1358 aa34.53■■■■□ 3.12
RFX1-205ENST00000589239 WAPLQ7Z5K2 1190 aa34.53■■■■□ 3.12
RFX1-205ENST00000589239 KIF7Q2M1P5 1343 aa34.52■■■■□ 3.12
RFX1-205ENST00000589239 KNDC1Q76NI1 1749 aa34.52■■■■□ 3.12
RFX1-205ENST00000589239 DISP3Q9P2K9 1392 aa34.51■■■■□ 3.12
RFX1-205ENST00000589239 PLEKHH1Q9ULM0 1364 aa34.51■■■■□ 3.12
RFX1-205ENST00000589239 QRICH2Q9H0J4 1663 aa34.51■■■■□ 3.11
RFX1-205ENST00000589239 ROBO2Q9HCK4 1378 aa34.51■■■■□ 3.11
RFX1-205ENST00000589239 CCDC7Q96M83 1385 aa34.5■■■■□ 3.11
RFX1-205ENST00000589239 TMF1P82094 1093 aa34.5■■■■□ 3.11
RFX1-205ENST00000589239 CPS1P31327 1500 aa34.5■■■■□ 3.11
RFX1-205ENST00000589239 SBNO2Q9Y2G9 1366 aa34.49■■■■□ 3.11
RFX1-205ENST00000589239 POLR3GLQ9BT43 218 aa34.48■■■■□ 3.11
RFX1-205ENST00000589239 KCNA6P17658 529 aa34.46■■■■□ 3.11
RFX1-205ENST00000589239 SIRT1Q96EB6 747 aa34.46■■■■□ 3.11
RFX1-205ENST00000589239 FAM135BQ49AJ0 1406 aa34.46■■■■□ 3.11
RFX1-205ENST00000589239 XRN1Q8IZH2 1706 aaKnown RBP34.45■■■■□ 3.11
RFX1-205ENST00000589239 CHD2O14647 1828 aaKnown RBP34.44■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms