RNA–Protein interactions for RNA: ENST00000589123.5

NFIC-206, Transcript of nuclear factor I C, humanhuman

TSL 1 (best) BASIC

Gene NFIC, Length 8,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-206ENST00000589123 CHMP4CQ96CF2 233 aa17■□□□□ 0.31
NFIC-206ENST00000589123 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
NFIC-206ENST00000589123 RBM33Q96EV2 1170 aaKnown RBP17■□□□□ 0.31
NFIC-206ENST00000589123 TRDNQ13061 729 aa17■□□□□ 0.31
NFIC-206ENST00000589123 SIN3AQ96ST3 1273 aa16.99■□□□□ 0.31
NFIC-206ENST00000589123 ATP6V1DQ9Y5K8 247 aa16.99■□□□□ 0.31
NFIC-206ENST00000589123 DDX49Q9Y6V7 483 aaKnown RBP16.99■□□□□ 0.31
NFIC-206ENST00000589123 DHX37Q8IY37 1157 aaKnown RBP16.98■□□□□ 0.31
NFIC-206ENST00000589123 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
NFIC-206ENST00000589123 EID1Q9Y6B2 187 aa16.98■□□□□ 0.31
NFIC-206ENST00000589123 TSPYL1Q9H0U9 437 aa16.98■□□□□ 0.31
NFIC-206ENST00000589123 CAGE1Q8TC20 777 aa16.98■□□□□ 0.31
NFIC-206ENST00000589123 BICD2Q8TD16 824 aa16.97■□□□□ 0.31
NFIC-206ENST00000589123 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
NFIC-206ENST00000589123 IBSPP21815 317 aaPredicted RBP16.97■□□□□ 0.31
NFIC-206ENST00000589123 WDR70Q9NW82 654 aa16.97■□□□□ 0.31
NFIC-206ENST00000589123 USP8P40818 1118 aa16.96■□□□□ 0.31
NFIC-206ENST00000589123 GOLGA6L7A0A1B0GV03 622 aa16.96■□□□□ 0.31
NFIC-206ENST00000589123 CCDC146Q8IYE0 955 aa16.96■□□□□ 0.31
NFIC-206ENST00000589123 GIMAP7Q8NHV1 300 aa16.96■□□□□ 0.31
NFIC-206ENST00000589123 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
NFIC-206ENST00000589123 KTN1Q86UP2 1357 aaKnown RBP16.95■□□□□ 0.3
NFIC-206ENST00000589123 NUTM2DQ5VT03 806 aaPredicted RBP16.95■□□□□ 0.3
NFIC-206ENST00000589123 SEPT7Q16181 437 aaKnown RBP16.95■□□□□ 0.3
NFIC-206ENST00000589123 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
NFIC-206ENST00000589123 KDM4AO75164 1064 aa16.94■□□□□ 0.3
NFIC-206ENST00000589123 MYO6Q9UM54 1294 aa16.94■□□□□ 0.3
NFIC-206ENST00000589123 TTC5Q8N0Z6 440 aa16.94■□□□□ 0.3
NFIC-206ENST00000589123 ANO2Q9NQ90 1003 aa16.94■□□□□ 0.3
NFIC-206ENST00000589123 SEPT11Q9NVA2 429 aaKnown RBP16.94■□□□□ 0.3
NFIC-206ENST00000589123 ANKRD45Q5TZF3 282 aa16.93■□□□□ 0.3
NFIC-206ENST00000589123 KIAA0754O94854 1291 aa16.93■□□□□ 0.3
NFIC-206ENST00000589123 EIF2S2P20042 333 aaKnown RBP16.93■□□□□ 0.3
NFIC-206ENST00000589123 GSE1Q14687 1217 aa16.93■□□□□ 0.3
NFIC-206ENST00000589123 PDILTQ8N807 584 aa16.93■□□□□ 0.3
NFIC-206ENST00000589123 SYCP1Q15431 976 aa16.93■□□□□ 0.3
NFIC-206ENST00000589123 FAM43AQ8N2R8 423 aa16.93■□□□□ 0.3
NFIC-206ENST00000589123 IPO9Q96P70 1041 aaKnown RBP16.93■□□□□ 0.3
NFIC-206ENST00000589123 ZNF526Q8TF50 670 aaPredicted RBP16.92■□□□□ 0.3
NFIC-206ENST00000589123 MNS1Q8NEH6 495 aa16.92■□□□□ 0.3
NFIC-206ENST00000589123 NECTIN2Q92692 538 aa16.92■□□□□ 0.3
NFIC-206ENST00000589123 ELL2O00472 640 aaPredicted RBP16.92■□□□□ 0.3
NFIC-206ENST00000589123 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
NFIC-206ENST00000589123 SAFBQ15424 915 aaKnown RBP eCLIP16.91■□□□□ 0.3
NFIC-206ENST00000589123 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
NFIC-206ENST00000589123 NF2P35240 595 aa16.9■□□□□ 0.3
NFIC-206ENST00000589123 ENOX2Q16206 610 aaKnown RBP16.89■□□□□ 0.3
NFIC-206ENST00000589123 CLIP1P30622 1438 aa16.89■□□□□ 0.29
NFIC-206ENST00000589123 RSPH4AQ5TD94 716 aa16.89■□□□□ 0.29
NFIC-206ENST00000589123 ERCC4Q92889 916 aaPredicted RBP16.89■□□□□ 0.29
NFIC-206ENST00000589123 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.29
NFIC-206ENST00000589123 RALBP1Q15311 655 aa16.89■□□□□ 0.29
NFIC-206ENST00000589123 PRKCSHP14314 528 aaPredicted RBP16.89■□□□□ 0.29
NFIC-206ENST00000589123 TERF2IPQ9NYB0 399 aa16.89■□□□□ 0.29
NFIC-206ENST00000589123 TEFQ10587 303 aa16.88■□□□□ 0.29
NFIC-206ENST00000589123 SKOR2Q2VWA4 1001 aaPredicted RBP16.88■□□□□ 0.29
NFIC-206ENST00000589123 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
NFIC-206ENST00000589123 RUFY2Q8WXA3 655 aa16.87■□□□□ 0.29
NFIC-206ENST00000589123 IFT57Q9NWB7 429 aa16.87■□□□□ 0.29
NFIC-206ENST00000589123 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
NFIC-206ENST00000589123 IFIT2P09913 472 aaKnown RBP16.86■□□□□ 0.29
NFIC-206ENST00000589123 PLIN1O60240 522 aa16.86■□□□□ 0.29
NFIC-206ENST00000589123 NEBLO76041 1014 aa16.86■□□□□ 0.29
NFIC-206ENST00000589123 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
NFIC-206ENST00000589123 BRMS1Q9HCU9 246 aa16.85■□□□□ 0.29
NFIC-206ENST00000589123 PDCL3Q9H2J4 239 aa16.85■□□□□ 0.29
NFIC-206ENST00000589123 ANKRD18AQ8IVF6 992 aa16.85■□□□□ 0.29
NFIC-206ENST00000589123 VPS37CA5D8V6 355 aaPredicted RBP16.85■□□□□ 0.29
NFIC-206ENST00000589123 ROCK2O75116 1388 aaKnown RBP16.84■□□□□ 0.29
NFIC-206ENST00000589123 OLFM4Q6UX06 510 aa16.84■□□□□ 0.29
NFIC-206ENST00000589123 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■■□□ 15
NFIC-206ENST00000589123 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
NFIC-206ENST00000589123 CDK5RAP3Q96JB5 506 aa16.83■□□□□ 0.29
NFIC-206ENST00000589123 CCDC180Q9P1Z9 1646 aa16.83■□□□□ 0.28
NFIC-206ENST00000589123 ATP2B2Q01814 1243 aa16.83■□□□□ 0.28
NFIC-206ENST00000589123 BRPF1P55201 1214 aaPredicted RBP16.83■□□□□ 0.28
NFIC-206ENST00000589123 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
NFIC-206ENST00000589123 CCNB3Q8WWL7 1395 aa16.82■□□□□ 0.28
NFIC-206ENST00000589123 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
NFIC-206ENST00000589123 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
NFIC-206ENST00000589123 KRT18P05783 430 aaKnown RBP16.82■□□□□ 0.28
NFIC-206ENST00000589123 AXDND1Q5T1B0 1012 aaPredicted RBP16.81■□□□□ 0.28
NFIC-206ENST00000589123 CT47B1P0C2W7 299 aaPredicted RBP16.81■□□□□ 0.28
NFIC-206ENST00000589123 HSP90AB4PQ58FF6 505 aa16.81■□□□□ 0.28
NFIC-206ENST00000589123 AEBP1Q8IUX7 1158 aa16.81■□□□□ 0.28
NFIC-206ENST00000589123 RALYLQ86SE5 291 aaKnown RBP16.8■□□□□ 0.28
NFIC-206ENST00000589123 CENPHQ9H3R5 247 aa16.8■□□□□ 0.28
NFIC-206ENST00000589123 EZRP15311 586 aaKnown RBP16.8■□□□□ 0.28
NFIC-206ENST00000589123 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
NFIC-206ENST00000589123 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
NFIC-206ENST00000589123 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
NFIC-206ENST00000589123 WASHC4Q2M389 1173 aa16.8■□□□□ 0.28
NFIC-206ENST00000589123 GOLGA6L10A6NI86 522 aa16.8■□□□□ 0.28
NFIC-206ENST00000589123 ERLIN2O94905 339 aa16.79■□□□□ 0.28
NFIC-206ENST00000589123 TAX1BP1Q86VP1 789 aa16.79■□□□□ 0.28
NFIC-206ENST00000589123 XBP1P17861 261 aa16.79■□□□□ 0.28
NFIC-206ENST00000589123 GPATCH11Q8N954 259 aa16.79■□□□□ 0.28
NFIC-206ENST00000589123 CCDC73Q6ZRK6 1079 aa16.78■□□□□ 0.28
NFIC-206ENST00000589123 NEUROD6Q96NK8 337 aa16.78■□□□□ 0.28
NFIC-206ENST00000589123 MATR3P43243 847 aaKnown RBP eCLIP16.78■□□□□ 0.284e-6■■□□□ 11.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms