RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 FGD6Q6ZV73 1430 aa23.69■■□□□ 1.38
SF3A2-204ENST00000589118 ANKRD30AQ9BXX3 1397 aa23.69■■□□□ 1.38
SF3A2-204ENST00000589118 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
SF3A2-204ENST00000589118 MSH6P52701 1360 aa23.68■■□□□ 1.38
SF3A2-204ENST00000589118 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
SF3A2-204ENST00000589118 NKTRP30414 1462 aaKnown RBP23.66■■□□□ 1.38
SF3A2-204ENST00000589118 GCC2Q8IWJ2 1684 aa23.66■■□□□ 1.38
SF3A2-204ENST00000589118 APLP2Q06481 763 aa23.64■■□□□ 1.37
SF3A2-204ENST00000589118 ZFYVE9O95405 1425 aa23.63■■□□□ 1.37
SF3A2-204ENST00000589118 COL16A1Q07092 1604 aaPredicted RBP23.62■■□□□ 1.37
SF3A2-204ENST00000589118 PPP1R15AO75807 674 aaPredicted RBP23.62■■□□□ 1.37
SF3A2-204ENST00000589118 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
SF3A2-204ENST00000589118 JCADQ9P266 1359 aa23.62■■□□□ 1.37
SF3A2-204ENST00000589118 LRP6O75581 1613 aa23.62■■□□□ 1.37
SF3A2-204ENST00000589118 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
SF3A2-204ENST00000589118 CHGAP10645 457 aaKnown RBP23.61■■□□□ 1.37
SF3A2-204ENST00000589118 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
SF3A2-204ENST00000589118 FAM50AQ14320 339 aaKnown RBP23.59■■□□□ 1.37
SF3A2-204ENST00000589118 PLEKHG1Q9ULL1 1385 aa23.59■■□□□ 1.37
SF3A2-204ENST00000589118 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
SF3A2-204ENST00000589118 TRIM52Q96A61 297 aa23.58■■□□□ 1.37
SF3A2-204ENST00000589118 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.56■■□□□ 1.36
SF3A2-204ENST00000589118 MEX3CQ5U5Q3 659 aaKnown RBP23.54■■□□□ 1.36
SF3A2-204ENST00000589118 ADGRL2O95490 1459 aa23.54■■□□□ 1.36
SF3A2-204ENST00000589118 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
SF3A2-204ENST00000589118 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
SF3A2-204ENST00000589118 ADAMTS13Q76LX8 1427 aa23.52■■□□□ 1.36
SF3A2-204ENST00000589118 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
SF3A2-204ENST00000589118 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
SF3A2-204ENST00000589118 NUTM2BA6NNL0 878 aaPredicted RBP23.5■■□□□ 1.35
SF3A2-204ENST00000589118 NUTM2EB1AL46 878 aaPredicted RBP23.5■■□□□ 1.35
SF3A2-204ENST00000589118 NUTM2AQ8IVF1 878 aaPredicted RBP23.5■■□□□ 1.35
SF3A2-204ENST00000589118 E9PCH4 1651 aa23.5■■□□□ 1.35
SF3A2-204ENST00000589118 HDGFP51858 240 aaKnown RBP23.48■■□□□ 1.35
SF3A2-204ENST00000589118 ATF3P18847 181 aa23.47■■□□□ 1.35
SF3A2-204ENST00000589118 SPATA31A6Q5VVP1 1343 aa23.47■■□□□ 1.35
SF3A2-204ENST00000589118 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
SF3A2-204ENST00000589118 SHPRHQ149N8 1683 aa23.46■■□□□ 1.35
SF3A2-204ENST00000589118 AHDC1Q5TGY3 1603 aaPredicted RBP23.46■■□□□ 1.35
SF3A2-204ENST00000589118 C19orf44Q9H6X5 657 aa23.46■■□□□ 1.35
SF3A2-204ENST00000589118 ZNF772Q68DY9 489 aaPredicted RBP23.45■■□□□ 1.34
SF3A2-204ENST00000589118 AMOTL2Q9Y2J4 779 aa23.45■■□□□ 1.34
SF3A2-204ENST00000589118 BRINP3Q76B58 766 aa23.44■■□□□ 1.34
SF3A2-204ENST00000589118 CADPS2Q86UW7 1296 aa23.44■■□□□ 1.34
SF3A2-204ENST00000589118 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.44■■□□□ 1.34
SF3A2-204ENST00000589118 UNC13BO14795 1591 aa23.44■■□□□ 1.34
SF3A2-204ENST00000589118 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
SF3A2-204ENST00000589118 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
SF3A2-204ENST00000589118 DDX17Q92841 729 aaKnown RBP23.41■■□□□ 1.34
SF3A2-204ENST00000589118 RXRBP28702 533 aa23.4■■□□□ 1.34
SF3A2-204ENST00000589118 TRPM2O94759 1503 aa23.37■■□□□ 1.33
SF3A2-204ENST00000589118 AFF2P51816 1311 aa23.36■■□□□ 1.33
SF3A2-204ENST00000589118 NRXN3Q9Y4C0 1643 aa23.36■■□□□ 1.33
SF3A2-204ENST00000589118 IQGAP3Q86VI3 1631 aa23.35■■□□□ 1.33
SF3A2-204ENST00000589118 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
SF3A2-204ENST00000589118 ITGAEP38570 1179 aa23.34■■□□□ 1.33
SF3A2-204ENST00000589118 ASXL1Q8IXJ9 1541 aa23.33■■□□□ 1.33
SF3A2-204ENST00000589118 NUP155O75694 1391 aa23.32■■□□□ 1.32
SF3A2-204ENST00000589118 XRN1Q8IZH2 1706 aaKnown RBP23.32■■□□□ 1.32
SF3A2-204ENST00000589118 MST1RQ04912 1400 aa23.32■■□□□ 1.32
SF3A2-204ENST00000589118 NHSL1Q5SYE7 1610 aa23.31■■□□□ 1.32
SF3A2-204ENST00000589118 METP08581 1390 aa23.3■■□□□ 1.32
SF3A2-204ENST00000589118 C8orf37Q96NL8 207 aa23.3■■□□□ 1.32
SF3A2-204ENST00000589118 ZNF326Q5BKZ1 582 aaKnown RBP23.28■■□□□ 1.32
SF3A2-204ENST00000589118 SETD5Q9C0A6 1442 aa23.27■■□□□ 1.32
SF3A2-204ENST00000589118 QTRT2Q9H974 415 aaKnown RBP23.27■■□□□ 1.32
SF3A2-204ENST00000589118 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
SF3A2-204ENST00000589118 RGS12O14924 1447 aa23.25■■□□□ 1.31
SF3A2-204ENST00000589118 LRRC59Q96AG4 307 aaKnown RBP23.25■■□□□ 1.31
SF3A2-204ENST00000589118 NALCNQ8IZF0 1738 aa23.25■■□□□ 1.31
SF3A2-204ENST00000589118 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
SF3A2-204ENST00000589118 ADAMTS2O95450 1211 aa23.24■■□□□ 1.31
SF3A2-204ENST00000589118 SPHKAPQ2M3C7 1700 aa23.24■■□□□ 1.31
SF3A2-204ENST00000589118 PNPLA6Q8IY17 1366 aa23.24■■□□□ 1.31
SF3A2-204ENST00000589118 DCCP43146 1447 aa23.24■■□□□ 1.31
SF3A2-204ENST00000589118 CDK12Q9NYV4 1490 aaPredicted RBP23.24■■□□□ 1.31
SF3A2-204ENST00000589118 ROCK1Q13464 1354 aa23.22■■□□□ 1.31
SF3A2-204ENST00000589118 RBM6P78332 1123 aaKnown RBP23.19■■□□□ 1.3
SF3A2-204ENST00000589118 NGLY1Q96IV0 654 aa23.19■■□□□ 1.3
SF3A2-204ENST00000589118 ADGRL3Q9HAR2 1447 aa23.18■■□□□ 1.3
SF3A2-204ENST00000589118 ORAI2Q96SN7 254 aa23.17■■□□□ 1.3
SF3A2-204ENST00000589118 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
SF3A2-204ENST00000589118 NEXMIFQ5QGS0 1516 aa23.16■■□□□ 1.3
SF3A2-204ENST00000589118 C1orf167Q5SNV9 1468 aa23.14■■□□□ 1.29
SF3A2-204ENST00000589118 USP21Q9UK80 565 aa23.1■■□□□ 1.29
SF3A2-204ENST00000589118 KIF1BO60333 1816 aa23.09■■□□□ 1.29
SF3A2-204ENST00000589118 ROBO2Q9HCK4 1378 aa23.09■■□□□ 1.29
SF3A2-204ENST00000589118 SOS2Q07890 1332 aaPredicted RBP23.07■■□□□ 1.28
SF3A2-204ENST00000589118 LAMC1P11047 1609 aa23.06■■□□□ 1.28
SF3A2-204ENST00000589118 XPCQ01831 940 aaPredicted RBP23.03■■□□□ 1.28
SF3A2-204ENST00000589118 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
SF3A2-204ENST00000589118 TRPC5Q9UL62 973 aaPredicted RBP23.02■■□□□ 1.28
SF3A2-204ENST00000589118 FNBP4Q8N3X1 1017 aaPredicted RBP23■■□□□ 1.27
SF3A2-204ENST00000589118 NUTM2FA1L443 756 aa22.99■■□□□ 1.27
SF3A2-204ENST00000589118 ATRNO75882 1429 aa22.99■■□□□ 1.27
SF3A2-204ENST00000589118 PTCH1Q13635 1447 aa22.99■■□□□ 1.27
SF3A2-204ENST00000589118 ESCO1Q5FWF5 840 aa22.98■■□□□ 1.27
SF3A2-204ENST00000589118 COL22A1Q8NFW1 1626 aaPredicted RBP22.97■■□□□ 1.27
SF3A2-204ENST00000589118 SRCAPQ6ZRS2 3230 aa22.96■■□□□ 1.27
SF3A2-204ENST00000589118 VGFO15240 615 aaPredicted RBP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms