RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
ZNF440-206ENST00000588954 TMEM2Q9UHN6 1383 aa13.48□□□□□ -0.25
ZNF440-206ENST00000588954 NCKAP5LQ9HCH0 1330 aa13.48□□□□□ -0.25
ZNF440-206ENST00000588954 TXNDC2Q86VQ3 553 aa13.48□□□□□ -0.25
ZNF440-206ENST00000588954 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
ZNF440-206ENST00000588954 CLTCL1P53675 1640 aa13.47□□□□□ -0.25
ZNF440-206ENST00000588954 PPP1R15AO75807 674 aaPredicted RBP13.47□□□□□ -0.25
ZNF440-206ENST00000588954 TMEM131LA2VDJ0 1609 aa13.46□□□□□ -0.25
ZNF440-206ENST00000588954 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
ZNF440-206ENST00000588954 SLIT1O75093 1534 aa13.45□□□□□ -0.26
ZNF440-206ENST00000588954 BCANQ96GW7 911 aa13.45□□□□□ -0.26
ZNF440-206ENST00000588954 KIF1BO60333 1816 aa13.45□□□□□ -0.26
ZNF440-206ENST00000588954 RIMS2Q9UQ26 1411 aa13.45□□□□□ -0.26
ZNF440-206ENST00000588954 RPGRIP1LQ68CZ1 1315 aa13.44□□□□□ -0.26
ZNF440-206ENST00000588954 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
ZNF440-206ENST00000588954 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
ZNF440-206ENST00000588954 RGL3Q3MIN7 710 aa13.44□□□□□ -0.26
ZNF440-206ENST00000588954 LTKP29376 864 aa13.43□□□□□ -0.26
ZNF440-206ENST00000588954 VGFO15240 615 aaPredicted RBP13.42□□□□□ -0.26
ZNF440-206ENST00000588954 NPHP4O75161 1426 aaPredicted RBP13.41□□□□□ -0.26
ZNF440-206ENST00000588954 STRCQ7RTU9 1775 aa13.41□□□□□ -0.26
ZNF440-206ENST00000588954 NUTM2DQ5VT03 806 aaPredicted RBP13.41□□□□□ -0.26
ZNF440-206ENST00000588954 MYO5BQ9ULV0 1848 aa13.41□□□□□ -0.26
ZNF440-206ENST00000588954 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
ZNF440-206ENST00000588954 POLR1AO95602 1720 aaPredicted RBP13.4□□□□□ -0.26
ZNF440-206ENST00000588954 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
ZNF440-206ENST00000588954 MED14O60244 1454 aa13.4□□□□□ -0.26
ZNF440-206ENST00000588954 SPATA31E1Q6ZUB1 1445 aa13.39□□□□□ -0.27
ZNF440-206ENST00000588954 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
ZNF440-206ENST00000588954 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
ZNF440-206ENST00000588954 PLEKHG1Q9ULL1 1385 aa13.38□□□□□ -0.27
ZNF440-206ENST00000588954 ZBTB22O15209 634 aa13.38□□□□□ -0.27
ZNF440-206ENST00000588954 CCER1Q8TC90 406 aaPredicted RBP13.37□□□□□ -0.27
ZNF440-206ENST00000588954 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
ZNF440-206ENST00000588954 SIN3AQ96ST3 1273 aa13.37□□□□□ -0.27
ZNF440-206ENST00000588954 NEXMIFQ5QGS0 1516 aa13.36□□□□□ -0.27
ZNF440-206ENST00000588954 IQGAP1P46940 1657 aa13.36□□□□□ -0.27
ZNF440-206ENST00000588954 SLC4A2P04920 1241 aa13.35□□□□□ -0.27
ZNF440-206ENST00000588954 DCAF11Q8TEB1 546 aa13.35□□□□□ -0.27
ZNF440-206ENST00000588954 SLC26A8Q96RN1 970 aa13.35□□□□□ -0.27
ZNF440-206ENST00000588954 CLSPNQ9HAW4 1339 aa13.35□□□□□ -0.27
ZNF440-206ENST00000588954 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
ZNF440-206ENST00000588954 TBX22Q9Y458 520 aa13.34□□□□□ -0.27
ZNF440-206ENST00000588954 ADGRF5Q8IZF2 1346 aa13.32□□□□□ -0.28
ZNF440-206ENST00000588954 PPLO60437 1756 aa13.32□□□□□ -0.28
ZNF440-206ENST00000588954 TONSLQ96HA7 1378 aa13.31□□□□□ -0.28
ZNF440-206ENST00000588954 ZNF335Q9H4Z2 1342 aaPredicted RBP13.3□□□□□ -0.28
ZNF440-206ENST00000588954 MYOM2P54296 1465 aa13.29□□□□□ -0.28
ZNF440-206ENST00000588954 DIP2AQ14689 1571 aa13.29□□□□□ -0.28
ZNF440-206ENST00000588954 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
ZNF440-206ENST00000588954 KCNA6P17658 529 aa13.29□□□□□ -0.28
ZNF440-206ENST00000588954 L3MBTL2Q969R5 705 aa13.29□□□□□ -0.28
ZNF440-206ENST00000588954 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
ZNF440-206ENST00000588954 PIK3R4Q99570 1358 aa13.28□□□□□ -0.28
ZNF440-206ENST00000588954 IFT172Q9UG01 1749 aa13.27□□□□□ -0.28
ZNF440-206ENST00000588954 PIK3C2GO75747 1445 aa13.26□□□□□ -0.29
ZNF440-206ENST00000588954 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
ZNF440-206ENST00000588954 ALKQ9UM73 1620 aa13.25□□□□□ -0.29
ZNF440-206ENST00000588954 NRXN1Q9ULB1 1477 aa13.25□□□□□ -0.29
ZNF440-206ENST00000588954 TIMELESSQ9UNS1 1208 aa13.25□□□□□ -0.29
ZNF440-206ENST00000588954 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
ZNF440-206ENST00000588954 CPS1P31327 1500 aa13.24□□□□□ -0.29
ZNF440-206ENST00000588954 METP08581 1390 aa13.24□□□□□ -0.29
ZNF440-206ENST00000588954 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
ZNF440-206ENST00000588954 NRXN3Q9Y4C0 1643 aa13.24□□□□□ -0.29
ZNF440-206ENST00000588954 PROSER2Q86WR7 435 aaPredicted RBP13.23□□□□□ -0.29
ZNF440-206ENST00000588954 CERKQ8TCT0 537 aa13.22□□□□□ -0.29
ZNF440-206ENST00000588954 TMEM132EQ6IEE7 984 aa13.21□□□□□ -0.29
ZNF440-206ENST00000588954 FOXD4L1Q9NU39 408 aa13.21□□□□□ -0.29
ZNF440-206ENST00000588954 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.3
ZNF440-206ENST00000588954 LAMC1P11047 1609 aa13.21□□□□□ -0.3
ZNF440-206ENST00000588954 LTBP4Q8N2S1 1624 aa13.21□□□□□ -0.3
ZNF440-206ENST00000588954 STK26Q9P289 416 aa13.2□□□□□ -0.3
ZNF440-206ENST00000588954 NKTRP30414 1462 aaKnown RBP13.2□□□□□ -0.3
ZNF440-206ENST00000588954 CHD2O14647 1828 aaKnown RBP13.19□□□□□ -0.3
ZNF440-206ENST00000588954 C14orf37Q86TY3 774 aa13.19□□□□□ -0.3
ZNF440-206ENST00000588954 PTPRUQ92729 1446 aa13.19□□□□□ -0.3
ZNF440-206ENST00000588954 NWD1Q149M9 1564 aa13.19□□□□□ -0.3
ZNF440-206ENST00000588954 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
ZNF440-206ENST00000588954 YTHDC2Q9H6S0 1430 aaKnown RBP13.17□□□□□ -0.3
ZNF440-206ENST00000588954 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
ZNF440-206ENST00000588954 TMEM94Q12767 1356 aa13.17□□□□□ -0.3
ZNF440-206ENST00000588954 ABCC11Q96J66 1382 aa13.17□□□□□ -0.3
ZNF440-206ENST00000588954 SETD1AO15047 1707 aaKnown RBP13.16□□□□□ -0.3
ZNF440-206ENST00000588954 NCOA3Q9Y6Q9 1424 aa13.16□□□□□ -0.3
ZNF440-206ENST00000588954 STRCP1A6NGW2 1772 aa13.16□□□□□ -0.3
ZNF440-206ENST00000588954 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
ZNF440-206ENST00000588954 NBPF1Q3BBV0 1214 aa13.15□□□□□ -0.3
ZNF440-206ENST00000588954 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
ZNF440-206ENST00000588954 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
ZNF440-206ENST00000588954 RBM33Q96EV2 1170 aaKnown RBP13.15□□□□□ -0.3
ZNF440-206ENST00000588954 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
ZNF440-206ENST00000588954 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
ZNF440-206ENST00000588954 PTCH1Q13635 1447 aa13.14□□□□□ -0.31
ZNF440-206ENST00000588954 XRN1Q8IZH2 1706 aaKnown RBP13.14□□□□□ -0.31
ZNF440-206ENST00000588954 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
ZNF440-206ENST00000588954 POGKQ9P215 609 aa13.14□□□□□ -0.31
ZNF440-206ENST00000588954 MSH6P52701 1360 aa13.14□□□□□ -0.31
ZNF440-206ENST00000588954 TECPR2O15040 1411 aa13.13□□□□□ -0.31
ZNF440-206ENST00000588954 ADGRB1O14514 1584 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms