RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 PTPN23Q9H3S7 1636 aa34.16■■■■□ 3.06
CAPNS1-205ENST00000588780 NWD1Q149M9 1564 aa34.16■■■■□ 3.06
CAPNS1-205ENST00000588780 ANKRD30AQ9BXX3 1397 aa34.16■■■■□ 3.06
CAPNS1-205ENST00000588780 SLC52A1Q9NWF4 448 aa34.16■■■■□ 3.06
CAPNS1-205ENST00000588780 LMTK2Q8IWU2 1503 aa34.14■■■■□ 3.06
CAPNS1-205ENST00000588780 APLP2Q06481 763 aa34.14■■■■□ 3.06
CAPNS1-205ENST00000588780 TRIM52Q96A61 297 aa34.13■■■■□ 3.05
CAPNS1-205ENST00000588780 HDGFP51858 240 aaKnown RBP34.11■■■■□ 3.05
CAPNS1-205ENST00000588780 NOS1P29475 1434 aa34.11■■■■□ 3.05
CAPNS1-205ENST00000588780 LOC105371045A0A1W2PR82 267 aa34.1■■■■□ 3.05
CAPNS1-205ENST00000588780 ZNF772Q68DY9 489 aaPredicted RBP34.1■■■■□ 3.05
CAPNS1-205ENST00000588780 SPATA31A6Q5VVP1 1343 aa34.07■■■■□ 3.05
CAPNS1-205ENST00000588780 UPF1Q92900 1129 aaKnown RBP eCLIP34.05■■■■□ 3.048e-10■■■■■ 28.7
CAPNS1-205ENST00000588780 PLEKHG1Q9ULL1 1385 aa34.05■■■■□ 3.04
CAPNS1-205ENST00000588780 CHGAP10645 457 aaKnown RBP34.04■■■■□ 3.04
CAPNS1-205ENST00000588780 COL16A1Q07092 1604 aaPredicted RBP34.03■■■■□ 3.04
CAPNS1-205ENST00000588780 RIMS2Q9UQ26 1411 aa34.03■■■■□ 3.04
CAPNS1-205ENST00000588780 ATF3P18847 181 aa34.02■■■■□ 3.04
CAPNS1-205ENST00000588780 LRP6O75581 1613 aa34.01■■■■□ 3.04
CAPNS1-205ENST00000588780 FGD6Q6ZV73 1430 aa34.01■■■■□ 3.03
CAPNS1-205ENST00000588780 CHD2O14647 1828 aaKnown RBP34■■■■□ 3.03
CAPNS1-205ENST00000588780 CADPS2Q86UW7 1296 aa33.99■■■■□ 3.03
CAPNS1-205ENST00000588780 ZFYVE9O95405 1425 aa33.98■■■■□ 3.03
CAPNS1-205ENST00000588780 TBX22Q9Y458 520 aa33.98■■■■□ 3.03
CAPNS1-205ENST00000588780 NUTM2BA6NNL0 878 aaPredicted RBP33.97■■■■□ 3.03
CAPNS1-205ENST00000588780 NUTM2EB1AL46 878 aaPredicted RBP33.97■■■■□ 3.03
CAPNS1-205ENST00000588780 RXRBP28702 533 aa33.97■■■■□ 3.03
CAPNS1-205ENST00000588780 NUTM2AQ8IVF1 878 aaPredicted RBP33.97■■■■□ 3.03
CAPNS1-205ENST00000588780 NUTM2DQ5VT03 806 aaPredicted RBP33.96■■■■□ 3.03
CAPNS1-205ENST00000588780 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.95■■■■□ 3.03
CAPNS1-205ENST00000588780 NCOA3Q9Y6Q9 1424 aa33.95■■■■□ 3.02
CAPNS1-205ENST00000588780 C19orf44Q9H6X5 657 aa33.94■■■■□ 3.02
CAPNS1-205ENST00000588780 MYO5BQ9ULV0 1848 aa33.94■■■■□ 3.02
CAPNS1-205ENST00000588780 RPRD2Q5VT52 1461 aaKnown RBP33.94■■■■□ 3.02
CAPNS1-205ENST00000588780 GCC2Q8IWJ2 1684 aa33.92■■■■□ 3.02
CAPNS1-205ENST00000588780 FAM50AQ14320 339 aaKnown RBP33.89■■■■□ 3.02
CAPNS1-205ENST00000588780 AHDC1Q5TGY3 1603 aaPredicted RBP33.86■■■■□ 3.01
CAPNS1-205ENST00000588780 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.86■■■■□ 3.01
CAPNS1-205ENST00000588780 ANKRD50Q9ULJ7 1429 aa33.86■■■■□ 3.01
CAPNS1-205ENST00000588780 TMEM131LA2VDJ0 1609 aa33.86■■■■□ 3.01
CAPNS1-205ENST00000588780 SHPRHQ149N8 1683 aa33.85■■■■□ 3.01
CAPNS1-205ENST00000588780 BRINP3Q76B58 766 aa33.82■■■■□ 3
CAPNS1-205ENST00000588780 ADGRL2O95490 1459 aa33.82■■■■□ 3
CAPNS1-205ENST00000588780 AMOTL2Q9Y2J4 779 aa33.81■■■■□ 3
CAPNS1-205ENST00000588780 AFF2P51816 1311 aa33.8■■■■□ 3
CAPNS1-205ENST00000588780 ADAMTS13Q76LX8 1427 aa33.8■■■■□ 3
CAPNS1-205ENST00000588780 PIK3R4Q99570 1358 aa33.8■■■■□ 3
CAPNS1-205ENST00000588780 DIP2AQ14689 1571 aa33.77■■■■□ 3
CAPNS1-205ENST00000588780 CDK12Q9NYV4 1490 aaPredicted RBP33.74■■■□□ 2.99
CAPNS1-205ENST00000588780 TRPM2O94759 1503 aa33.73■■■□□ 2.99
CAPNS1-205ENST00000588780 C8orf37Q96NL8 207 aa33.72■■■□□ 2.99
CAPNS1-205ENST00000588780 LRRC59Q96AG4 307 aaKnown RBP33.69■■■□□ 2.98
CAPNS1-205ENST00000588780 QTRT2Q9H974 415 aaKnown RBP33.68■■■□□ 2.98
CAPNS1-205ENST00000588780 PTPRUQ92729 1446 aa33.67■■■□□ 2.98
CAPNS1-205ENST00000588780 ASXL1Q8IXJ9 1541 aa33.67■■■□□ 2.98
CAPNS1-205ENST00000588780 DCCP43146 1447 aa33.65■■■□□ 2.98
CAPNS1-205ENST00000588780 RBM6P78332 1123 aaKnown RBP33.65■■■□□ 2.98
CAPNS1-205ENST00000588780 SETD5Q9C0A6 1442 aa33.64■■■□□ 2.98
CAPNS1-205ENST00000588780 E9PCH4 1651 aa33.63■■■□□ 2.97
CAPNS1-205ENST00000588780 DDX17Q92841 729 aaKnown RBP33.61■■■□□ 2.97
CAPNS1-205ENST00000588780 RGS12O14924 1447 aa33.61■■■□□ 2.97
CAPNS1-205ENST00000588780 UNC13BO14795 1591 aa33.6■■■□□ 2.97
CAPNS1-205ENST00000588780 ZNF326Q5BKZ1 582 aaKnown RBP33.59■■■□□ 2.97
CAPNS1-205ENST00000588780 NGLY1Q96IV0 654 aa33.59■■■□□ 2.97
CAPNS1-205ENST00000588780 MST1RQ04912 1400 aa33.59■■■□□ 2.97
CAPNS1-205ENST00000588780 ADAMTS2O95450 1211 aa33.58■■■□□ 2.97
CAPNS1-205ENST00000588780 NHSL1Q5SYE7 1610 aa33.54■■■□□ 2.96
CAPNS1-205ENST00000588780 NUP155O75694 1391 aa33.54■■■□□ 2.96
CAPNS1-205ENST00000588780 PNPLA6Q8IY17 1366 aa33.54■■■□□ 2.96
CAPNS1-205ENST00000588780 XRN1Q8IZH2 1706 aaKnown RBP33.5■■■□□ 2.95
CAPNS1-205ENST00000588780 IQGAP3Q86VI3 1631 aa33.49■■■□□ 2.95
CAPNS1-205ENST00000588780 METP08581 1390 aa33.48■■■□□ 2.95
CAPNS1-205ENST00000588780 ATAD2Q6PL18 1390 aa33.47■■■□□ 2.95
CAPNS1-205ENST00000588780 ADGRL3Q9HAR2 1447 aa33.46■■■□□ 2.95
CAPNS1-205ENST00000588780 FOXD1Q16676 465 aa33.46■■■□□ 2.95
CAPNS1-205ENST00000588780 USP21Q9UK80 565 aa33.45■■■□□ 2.95
CAPNS1-205ENST00000588780 SETBP1Q9Y6X0 1596 aa33.45■■■□□ 2.95
CAPNS1-205ENST00000588780 NRXN3Q9Y4C0 1643 aa33.44■■■□□ 2.94
CAPNS1-205ENST00000588780 ITGAEP38570 1179 aa33.44■■■□□ 2.94
CAPNS1-205ENST00000588780 ZRANB1Q9UGI0 708 aa33.41■■■□□ 2.94
CAPNS1-205ENST00000588780 ROCK1Q13464 1354 aa33.41■■■□□ 2.94
CAPNS1-205ENST00000588780 TRPC5Q9UL62 973 aaPredicted RBP33.4■■■□□ 2.94
CAPNS1-205ENST00000588780 C1orf167Q5SNV9 1468 aa33.37■■■□□ 2.93
CAPNS1-205ENST00000588780 NALCNQ8IZF0 1738 aa33.35■■■□□ 2.93
CAPNS1-205ENST00000588780 ORAI2Q96SN7 254 aa33.33■■■□□ 2.93
CAPNS1-205ENST00000588780 SPHKAPQ2M3C7 1700 aa33.31■■■□□ 2.92
CAPNS1-205ENST00000588780 SOS2Q07890 1332 aaPredicted RBP33.28■■■□□ 2.92
CAPNS1-205ENST00000588780 SRCAPQ6ZRS2 3230 aa33.28■■■□□ 2.92
CAPNS1-205ENST00000588780 PTCH1Q13635 1447 aa33.27■■■□□ 2.92
CAPNS1-205ENST00000588780 FNBP4Q8N3X1 1017 aaPredicted RBP33.26■■■□□ 2.91
CAPNS1-205ENST00000588780 NEXMIFQ5QGS0 1516 aa33.23■■■□□ 2.91
CAPNS1-205ENST00000588780 ATRNO75882 1429 aa33.21■■■□□ 2.91
CAPNS1-205ENST00000588780 CCDC125Q86Z20 511 aa33.21■■■□□ 2.91
CAPNS1-205ENST00000588780 ROBO2Q9HCK4 1378 aa33.2■■■□□ 2.9
CAPNS1-205ENST00000588780 LAMC1P11047 1609 aa33.18■■■□□ 2.9
CAPNS1-205ENST00000588780 VGFO15240 615 aaPredicted RBP33.18■■■□□ 2.9
CAPNS1-205ENST00000588780 CLTCL1P53675 1640 aa33.17■■■□□ 2.9
CAPNS1-205ENST00000588780 ESCO1Q5FWF5 840 aa33.17■■■□□ 2.9
CAPNS1-205ENST00000588780 NPHP3Q7Z494 1330 aa33.14■■■□□ 2.9
CAPNS1-205ENST00000588780 XPCQ01831 940 aaPredicted RBP33.13■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms