RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 TRPM1Q7Z4N2 1603 aa20.23■□□□□ 0.83
TPGS1-202ENST00000588278 CFAP70Q5T0N1 1121 aa20.23■□□□□ 0.83
TPGS1-202ENST00000588278 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
TPGS1-202ENST00000588278 SLKQ9H2G2 1235 aaPredicted RBP20.22■□□□□ 0.83
TPGS1-202ENST00000588278 DUOX2Q9NRD8 1548 aa20.22■□□□□ 0.83
TPGS1-202ENST00000588278 MYO5CQ9NQX4 1742 aa20.22■□□□□ 0.83
TPGS1-202ENST00000588278 FAM161AQ3B820 660 aa20.22■□□□□ 0.83
TPGS1-202ENST00000588278 SCAPERQ9BY12 1400 aa20.22■□□□□ 0.83
TPGS1-202ENST00000588278 GPRASP1Q5JY77 1395 aa20.2■□□□□ 0.82
TPGS1-202ENST00000588278 COL17A1Q9UMD9 1497 aaPredicted RBP20.2■□□□□ 0.82
TPGS1-202ENST00000588278 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
TPGS1-202ENST00000588278 TNNT2P45379 298 aaPredicted RBP20.19■□□□□ 0.82
TPGS1-202ENST00000588278 PDE3BQ13370 1112 aa20.18■□□□□ 0.82
TPGS1-202ENST00000588278 GGT6Q6P531 493 aa20.18■□□□□ 0.82
TPGS1-202ENST00000588278 PPP2R1AP30153 589 aa20.17■□□□□ 0.82
TPGS1-202ENST00000588278 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
TPGS1-202ENST00000588278 PKNOX2Q96KN3 472 aa20.17■□□□□ 0.82
TPGS1-202ENST00000588278 ZCCHC11Q5TAX3 1644 aaKnown RBP20.17■□□□□ 0.82
TPGS1-202ENST00000588278 UNC13BO14795 1591 aa20.17■□□□□ 0.82
TPGS1-202ENST00000588278 KANK1Q14678 1352 aa20.15■□□□□ 0.82
TPGS1-202ENST00000588278 IQGAP3Q86VI3 1631 aa20.14■□□□□ 0.81
TPGS1-202ENST00000588278 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
TPGS1-202ENST00000588278 MAST1Q9Y2H9 1570 aa20.13■□□□□ 0.81
TPGS1-202ENST00000588278 CENPQQ7L2Z9 268 aaPredicted RBP20.13■□□□□ 0.81
TPGS1-202ENST00000588278 SEC24BO95487 1268 aa20.13■□□□□ 0.81
TPGS1-202ENST00000588278 PRDM15P57071 1507 aaPredicted RBP20.12■□□□□ 0.81
TPGS1-202ENST00000588278 MAGI2Q86UL8 1455 aa20.11■□□□□ 0.81
TPGS1-202ENST00000588278 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
TPGS1-202ENST00000588278 PLXNC1O60486 1568 aa20.11■□□□□ 0.81
TPGS1-202ENST00000588278 CDCA8Q53HL2 280 aa20.11■□□□□ 0.81
TPGS1-202ENST00000588278 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
TPGS1-202ENST00000588278 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
TPGS1-202ENST00000588278 VSIG10Q8N0Z9 540 aa20.1■□□□□ 0.81
TPGS1-202ENST00000588278 UHRF1BP1LA0JNW5 1464 aa20.1■□□□□ 0.81
TPGS1-202ENST00000588278 ABCC1P33527 1531 aa20.1■□□□□ 0.81
TPGS1-202ENST00000588278 FANCAO15360 1455 aa20.1■□□□□ 0.81
TPGS1-202ENST00000588278 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
TPGS1-202ENST00000588278 NAP1L5Q96NT1 182 aaPredicted RBP20.09■□□□□ 0.81
TPGS1-202ENST00000588278 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
TPGS1-202ENST00000588278 E9PCH4 1651 aa20.09■□□□□ 0.81
TPGS1-202ENST00000588278 ATP10AO60312 1499 aa20.09■□□□□ 0.81
TPGS1-202ENST00000588278 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
TPGS1-202ENST00000588278 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.81
TPGS1-202ENST00000588278 UGGT1Q9NYU2 1555 aa20.07■□□□□ 0.8
TPGS1-202ENST00000588278 APAF1O14727 1248 aa20.07■□□□□ 0.8
TPGS1-202ENST00000588278 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
TPGS1-202ENST00000588278 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
TPGS1-202ENST00000588278 SAFB2Q14151 953 aaKnown RBP eCLIP20.06■□□□□ 0.8
TPGS1-202ENST00000588278 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
TPGS1-202ENST00000588278 PLEKHH1Q9ULM0 1364 aa20.05■□□□□ 0.8
TPGS1-202ENST00000588278 WDR7Q9Y4E6 1490 aa20.04■□□□□ 0.8
TPGS1-202ENST00000588278 EIF2AK4Q9P2K8 1649 aaKnown RBP20.04■□□□□ 0.8
TPGS1-202ENST00000588278 USP19O94966 1318 aa20.04■□□□□ 0.8
TPGS1-202ENST00000588278 GOLGA2Q08379 1002 aa20.03■□□□□ 0.8
TPGS1-202ENST00000588278 DUSP27Q5VZP5 1158 aa20.03■□□□□ 0.8
TPGS1-202ENST00000588278 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
TPGS1-202ENST00000588278 IGHDP01880 384 aa20.02■□□□□ 0.8
TPGS1-202ENST00000588278 ZMYND15Q9H091 742 aa20.02■□□□□ 0.8
TPGS1-202ENST00000588278 BCAR3O75815 825 aa20.01■□□□□ 0.79
TPGS1-202ENST00000588278 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
TPGS1-202ENST00000588278 ZFYVE16Q7Z3T8 1539 aa20■□□□□ 0.79
TPGS1-202ENST00000588278 EIF3AQ14152 1382 aaKnown RBP20■□□□□ 0.79
TPGS1-202ENST00000588278 SPINK5Q9NQ38 1064 aaPredicted RBP20■□□□□ 0.79
TPGS1-202ENST00000588278 SLC12A5Q9H2X9 1139 aa19.99■□□□□ 0.79
TPGS1-202ENST00000588278 RRP7AQ9Y3A4 280 aaKnown RBP19.99■□□□□ 0.79
TPGS1-202ENST00000588278 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
TPGS1-202ENST00000588278 CLTCL1P53675 1640 aa19.98■□□□□ 0.79
TPGS1-202ENST00000588278 XRCC6P12956 609 aaKnown RBP eCLIP19.98■□□□□ 0.79
TPGS1-202ENST00000588278 BLMP54132 1417 aaPredicted RBP19.98■□□□□ 0.79
TPGS1-202ENST00000588278 RTEL1-TNFRSF6BF6WH68 1400 aa19.97■□□□□ 0.79
TPGS1-202ENST00000588278 ASXL2Q76L83 1435 aa19.97■□□□□ 0.79
TPGS1-202ENST00000588278 RAPGEF3O95398 923 aa19.97■□□□□ 0.79
TPGS1-202ENST00000588278 ATP7AQ04656 1500 aa19.97■□□□□ 0.79
TPGS1-202ENST00000588278 PNNQ9H307 717 aaKnown RBP19.96■□□□□ 0.79
TPGS1-202ENST00000588278 MADDQ8WXG6 1647 aa19.96■□□□□ 0.79
TPGS1-202ENST00000588278 DMRT2Q9Y5R5 561 aa19.95■□□□□ 0.78
TPGS1-202ENST00000588278 TRPM2O94759 1503 aa19.95■□□□□ 0.78
TPGS1-202ENST00000588278 MORC1Q86VD1 984 aa19.94■□□□□ 0.78
TPGS1-202ENST00000588278 PTPRTO14522 1441 aa19.94■□□□□ 0.78
TPGS1-202ENST00000588278 STK26Q9P289 416 aa19.94■□□□□ 0.78
TPGS1-202ENST00000588278 NOS1P29475 1434 aa19.93■□□□□ 0.78
TPGS1-202ENST00000588278 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
TPGS1-202ENST00000588278 CANXP27824 592 aaKnown RBP19.93■□□□□ 0.78
TPGS1-202ENST00000588278 HSP90AA2PQ14568 343 aaPredicted RBP19.92■□□□□ 0.78
TPGS1-202ENST00000588278 L1TD1Q5T7N2 865 aaKnown RBP19.91■□□□□ 0.78
TPGS1-202ENST00000588278 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
TPGS1-202ENST00000588278 STAC3Q96MF2 364 aa19.91■□□□□ 0.78
TPGS1-202ENST00000588278 LAMC1P11047 1609 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 ZMYM4Q5VZL5 1548 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 SLFN5Q08AF3 891 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 GLIPR1L2Q4G1C9 344 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 PANK1Q8TE04 598 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 COG6Q9Y2V7 657 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 SPHKAPQ2M3C7 1700 aa19.9■□□□□ 0.78
TPGS1-202ENST00000588278 GOLGA6L3A6NEY3 463 aa19.89■□□□□ 0.78
TPGS1-202ENST00000588278 BECN1Q14457 450 aa19.89■□□□□ 0.78
TPGS1-202ENST00000588278 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.89■□□□□ 0.78
TPGS1-202ENST00000588278 ANTXR1Q9H6X2 564 aa19.89■□□□□ 0.77
TPGS1-202ENST00000588278 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
TPGS1-202ENST00000588278 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms