RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 PPP1R15AO75807 674 aaPredicted RBP25.94■■□□□ 1.74
TMED1-203ENST00000588259 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
TMED1-203ENST00000588259 E9PCH4 1651 aa25.93■■□□□ 1.74
TMED1-203ENST00000588259 IQGAP3Q86VI3 1631 aa25.92■■□□□ 1.74
TMED1-203ENST00000588259 TMEM131LA2VDJ0 1609 aa25.9■■□□□ 1.74
TMED1-203ENST00000588259 KCNA6P17658 529 aa25.9■■□□□ 1.74
TMED1-203ENST00000588259 TMEM94Q12767 1356 aa25.9■■□□□ 1.74
TMED1-203ENST00000588259 RIMS2Q9UQ26 1411 aa25.89■■□□□ 1.74
TMED1-203ENST00000588259 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
TMED1-203ENST00000588259 PHF23Q9BUL5 403 aaPredicted RBP25.89■■□□□ 1.74
TMED1-203ENST00000588259 NUP155O75694 1391 aa25.87■■□□□ 1.73
TMED1-203ENST00000588259 RBM33Q96EV2 1170 aaKnown RBP25.87■■□□□ 1.73
TMED1-203ENST00000588259 ZFYVE9O95405 1425 aa25.87■■□□□ 1.73
TMED1-203ENST00000588259 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
TMED1-203ENST00000588259 NKTRP30414 1462 aaKnown RBP25.85■■□□□ 1.73
TMED1-203ENST00000588259 NWD1Q149M9 1564 aa25.85■■□□□ 1.73
TMED1-203ENST00000588259 PLEKHG1Q9ULL1 1385 aa25.84■■□□□ 1.73
TMED1-203ENST00000588259 NUTM2DQ5VT03 806 aaPredicted RBP25.81■■□□□ 1.72
TMED1-203ENST00000588259 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
TMED1-203ENST00000588259 MSH6P52701 1360 aa25.79■■□□□ 1.72
TMED1-203ENST00000588259 CHD2O14647 1828 aaKnown RBP25.79■■□□□ 1.72
TMED1-203ENST00000588259 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
TMED1-203ENST00000588259 FAM135BQ49AJ0 1406 aa25.76■■□□□ 1.71
TMED1-203ENST00000588259 SPHKAPQ2M3C7 1700 aa25.75■■□□□ 1.71
TMED1-203ENST00000588259 C14orf37Q86TY3 774 aa25.73■■□□□ 1.71
TMED1-203ENST00000588259 DIP2AQ14689 1571 aa25.72■■□□□ 1.71
TMED1-203ENST00000588259 TBX22Q9Y458 520 aa25.71■■□□□ 1.71
TMED1-203ENST00000588259 ADAMTS13Q76LX8 1427 aa25.69■■□□□ 1.7
TMED1-203ENST00000588259 RRBP1Q9P2E9 1410 aaKnown RBP25.68■■□□□ 1.7
TMED1-203ENST00000588259 ZNF326Q5BKZ1 582 aaKnown RBP25.67■■□□□ 1.7
TMED1-203ENST00000588259 TRPM2O94759 1503 aa25.67■■□□□ 1.7
TMED1-203ENST00000588259 SLAIN2Q9P270 581 aa25.65■■□□□ 1.7
TMED1-203ENST00000588259 PHLPP1O60346 1717 aa25.65■■□□□ 1.7
TMED1-203ENST00000588259 PIK3R4Q99570 1358 aa25.62■■□□□ 1.69
TMED1-203ENST00000588259 CLTCL1P53675 1640 aa25.61■■□□□ 1.69
TMED1-203ENST00000588259 NAIPQ13075 1403 aa25.61■■□□□ 1.69
TMED1-203ENST00000588259 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.6■■□□□ 1.69
TMED1-203ENST00000588259 TRIM52Q96A61 297 aa25.59■■□□□ 1.69
TMED1-203ENST00000588259 NCOA3Q9Y6Q9 1424 aa25.58■■□□□ 1.69
TMED1-203ENST00000588259 ATF3P18847 181 aa25.58■■□□□ 1.69
TMED1-203ENST00000588259 AMOTL2Q9Y2J4 779 aa25.58■■□□□ 1.69
TMED1-203ENST00000588259 KIF1BO60333 1816 aa25.58■■□□□ 1.68
TMED1-203ENST00000588259 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
TMED1-203ENST00000588259 SETBP1Q9Y6X0 1596 aa25.56■■□□□ 1.68
TMED1-203ENST00000588259 PTPRUQ92729 1446 aa25.55■■□□□ 1.68
TMED1-203ENST00000588259 CADPS2Q86UW7 1296 aa25.55■■□□□ 1.68
TMED1-203ENST00000588259 C19orf44Q9H6X5 657 aa25.54■■□□□ 1.68
TMED1-203ENST00000588259 RGS17Q9UGC6 210 aaPredicted RBP25.53■■□□□ 1.68
TMED1-203ENST00000588259 XRN1Q8IZH2 1706 aaKnown RBP25.53■■□□□ 1.68
TMED1-203ENST00000588259 NEXMIFQ5QGS0 1516 aa25.52■■□□□ 1.68
TMED1-203ENST00000588259 JCADQ9P266 1359 aa25.51■■□□□ 1.67
TMED1-203ENST00000588259 HFM1A2PYH4 1435 aa25.51■■□□□ 1.67
TMED1-203ENST00000588259 COL16A1Q07092 1604 aaPredicted RBP25.51■■□□□ 1.67
TMED1-203ENST00000588259 METP08581 1390 aa25.48■■□□□ 1.67
TMED1-203ENST00000588259 SLC4A1APQ9BWU0 796 aaKnown RBP25.47■■□□□ 1.67
TMED1-203ENST00000588259 AHDC1Q5TGY3 1603 aaPredicted RBP25.45■■□□□ 1.66
TMED1-203ENST00000588259 DCCP43146 1447 aa25.44■■□□□ 1.66
TMED1-203ENST00000588259 POTEAQ6S8J7 498 aa25.42■■□□□ 1.66
TMED1-203ENST00000588259 MEX3CQ5U5Q3 659 aaKnown RBP25.41■■□□□ 1.66
TMED1-203ENST00000588259 BRINP3Q76B58 766 aa25.41■■□□□ 1.66
TMED1-203ENST00000588259 NALCNQ8IZF0 1738 aa25.39■■□□□ 1.65
TMED1-203ENST00000588259 ASXL1Q8IXJ9 1541 aa25.38■■□□□ 1.65
TMED1-203ENST00000588259 VGFO15240 615 aaPredicted RBP25.38■■□□□ 1.65
TMED1-203ENST00000588259 SHPRHQ149N8 1683 aa25.38■■□□□ 1.65
TMED1-203ENST00000588259 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
TMED1-203ENST00000588259 ADGRL3Q9HAR2 1447 aa25.37■■□□□ 1.65
TMED1-203ENST00000588259 MST1RQ04912 1400 aa25.37■■□□□ 1.65
TMED1-203ENST00000588259 FOXD1Q16676 465 aa25.36■■□□□ 1.65
TMED1-203ENST00000588259 LRP6O75581 1613 aa25.36■■□□□ 1.65
TMED1-203ENST00000588259 PPLO60437 1756 aa25.36■■□□□ 1.65
TMED1-203ENST00000588259 SETD1AO15047 1707 aaKnown RBP25.34■■□□□ 1.65
TMED1-203ENST00000588259 NUTM2BA6NNL0 878 aaPredicted RBP25.32■■□□□ 1.64
TMED1-203ENST00000588259 NUTM2EB1AL46 878 aaPredicted RBP25.32■■□□□ 1.64
TMED1-203ENST00000588259 NUTM2AQ8IVF1 878 aaPredicted RBP25.32■■□□□ 1.64
TMED1-203ENST00000588259 RPGRIP1LQ68CZ1 1315 aa25.32■■□□□ 1.64
TMED1-203ENST00000588259 NHSL1Q5SYE7 1610 aa25.31■■□□□ 1.64
TMED1-203ENST00000588259 CCDC144AA2RUR9 1427 aa25.29■■□□□ 1.64
TMED1-203ENST00000588259 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
TMED1-203ENST00000588259 ROBO2Q9HCK4 1378 aa25.28■■□□□ 1.64
TMED1-203ENST00000588259 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
TMED1-203ENST00000588259 RGL3Q3MIN7 710 aa25.25■■□□□ 1.63
TMED1-203ENST00000588259 SETD5Q9C0A6 1442 aa25.24■■□□□ 1.63
TMED1-203ENST00000588259 ZNF772Q68DY9 489 aaPredicted RBP25.24■■□□□ 1.63
TMED1-203ENST00000588259 MPHOSPH9Q99550 1183 aa25.24■■□□□ 1.63
TMED1-203ENST00000588259 C1orf167Q5SNV9 1468 aa25.22■■□□□ 1.63
TMED1-203ENST00000588259 LRRC59Q96AG4 307 aaKnown RBP25.22■■□□□ 1.63
TMED1-203ENST00000588259 ADGRF5Q8IZF2 1346 aa25.19■■□□□ 1.62
TMED1-203ENST00000588259 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
TMED1-203ENST00000588259 PRAG1Q86YV5 1406 aa25.18■■□□□ 1.62
TMED1-203ENST00000588259 STK26Q9P289 416 aa25.17■■□□□ 1.62
TMED1-203ENST00000588259 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
TMED1-203ENST00000588259 PNPLA6Q8IY17 1366 aa25.17■■□□□ 1.62
TMED1-203ENST00000588259 ORAI2Q96SN7 254 aa25.16■■□□□ 1.62
TMED1-203ENST00000588259 ANKRD30BQ9BXX2 1392 aa25.16■■□□□ 1.62
TMED1-203ENST00000588259 AFF2P51816 1311 aa25.15■■□□□ 1.62
TMED1-203ENST00000588259 C8orf37Q96NL8 207 aa25.14■■□□□ 1.62
TMED1-203ENST00000588259 CDC42BPGQ6DT37 1551 aa25.13■■□□□ 1.61
TMED1-203ENST00000588259 RXRBP28702 533 aa25.12■■□□□ 1.61
TMED1-203ENST00000588259 LAMC1P11047 1609 aa25.12■■□□□ 1.61
TMED1-203ENST00000588259 ADAMTS2O95450 1211 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms