RNA–Protein interactions for RNA: ENST00000588190.1

SMAD7-206, Transcript of SMAD family member 7, humanhuman

TSL 5

Gene SMAD7, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-206ENST00000588190 ADGRB3O60242 1522 aa21.63■■□□□ 1.05
SMAD7-206ENST00000588190 KDM5AP29375 1690 aaKnown RBP21.61■■□□□ 1.05
SMAD7-206ENST00000588190 FAM135BQ49AJ0 1406 aa21.61■■□□□ 1.05
SMAD7-206ENST00000588190 MSH6P52701 1360 aa21.61■■□□□ 1.05
SMAD7-206ENST00000588190 ADGRL2O95490 1459 aa21.6■■□□□ 1.05
SMAD7-206ENST00000588190 TET3O43151 1660 aa21.58■■□□□ 1.05
SMAD7-206ENST00000588190 RIMS2Q9UQ26 1411 aa21.57■■□□□ 1.04
SMAD7-206ENST00000588190 RGS17Q9UGC6 210 aaPredicted RBP21.57■■□□□ 1.04
SMAD7-206ENST00000588190 ROBO1Q9Y6N7 1651 aa21.56■■□□□ 1.04
SMAD7-206ENST00000588190 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
SMAD7-206ENST00000588190 SLAIN2Q9P270 581 aa21.56■■□□□ 1.04
SMAD7-206ENST00000588190 MYO5BQ9ULV0 1848 aa21.56■■□□□ 1.04
SMAD7-206ENST00000588190 RPRD2Q5VT52 1461 aaKnown RBP21.56■■□□□ 1.04
SMAD7-206ENST00000588190 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
SMAD7-206ENST00000588190 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.54■■□□□ 1.04
SMAD7-206ENST00000588190 NKTRP30414 1462 aaKnown RBP21.53■■□□□ 1.04
SMAD7-206ENST00000588190 PLEKHG1Q9ULL1 1385 aa21.53■■□□□ 1.04
SMAD7-206ENST00000588190 POTEAQ6S8J7 498 aa21.5■■□□□ 1.03
SMAD7-206ENST00000588190 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
SMAD7-206ENST00000588190 TBX22Q9Y458 520 aa21.49■■□□□ 1.03
SMAD7-206ENST00000588190 NUP155O75694 1391 aa21.48■■□□□ 1.03
SMAD7-206ENST00000588190 NWD1Q149M9 1564 aa21.48■■□□□ 1.03
SMAD7-206ENST00000588190 ATF3P18847 181 aa21.48■■□□□ 1.03
SMAD7-206ENST00000588190 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
SMAD7-206ENST00000588190 PHLPP1O60346 1717 aa21.47■■□□□ 1.03
SMAD7-206ENST00000588190 MEX3CQ5U5Q3 659 aaKnown RBP21.47■■□□□ 1.03
SMAD7-206ENST00000588190 CHD2O14647 1828 aaKnown RBP21.46■■□□□ 1.03
SMAD7-206ENST00000588190 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
SMAD7-206ENST00000588190 UNC13BO14795 1591 aa21.44■■□□□ 1.02
SMAD7-206ENST00000588190 E9PCH4 1651 aa21.44■■□□□ 1.02
SMAD7-206ENST00000588190 JCADQ9P266 1359 aa21.44■■□□□ 1.02
SMAD7-206ENST00000588190 ROCK1Q13464 1354 aa21.42■■□□□ 1.02
SMAD7-206ENST00000588190 CADPS2Q86UW7 1296 aa21.42■■□□□ 1.02
SMAD7-206ENST00000588190 AMOTL2Q9Y2J4 779 aa21.42■■□□□ 1.02
SMAD7-206ENST00000588190 C19orf44Q9H6X5 657 aa21.41■■□□□ 1.02
SMAD7-206ENST00000588190 IQGAP3Q86VI3 1631 aa21.38■■□□□ 1.01
SMAD7-206ENST00000588190 ADAMTS13Q76LX8 1427 aa21.38■■□□□ 1.01
SMAD7-206ENST00000588190 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
SMAD7-206ENST00000588190 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
SMAD7-206ENST00000588190 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
SMAD7-206ENST00000588190 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
SMAD7-206ENST00000588190 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.35■■□□□ 1.01
SMAD7-206ENST00000588190 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
SMAD7-206ENST00000588190 TRPM2O94759 1503 aa21.34■■□□□ 1.01
SMAD7-206ENST00000588190 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
SMAD7-206ENST00000588190 TRIM52Q96A61 297 aa21.33■■□□□ 1.01
SMAD7-206ENST00000588190 SPATA31A6Q5VVP1 1343 aa21.31■■□□□ 1
SMAD7-206ENST00000588190 COL16A1Q07092 1604 aaPredicted RBP21.3■■□□□ 1
SMAD7-206ENST00000588190 ZNF772Q68DY9 489 aaPredicted RBP21.3■■□□□ 1
SMAD7-206ENST00000588190 BRINP3Q76B58 766 aa21.3■■□□□ 1
SMAD7-206ENST00000588190 PTPRUQ92729 1446 aa21.29■■□□□ 1
SMAD7-206ENST00000588190 SETD1AO15047 1707 aaKnown RBP21.29■■□□□ 1
SMAD7-206ENST00000588190 SPHKAPQ2M3C7 1700 aa21.26■□□□□ 0.99
SMAD7-206ENST00000588190 LRP6O75581 1613 aa21.26■□□□□ 0.99
SMAD7-206ENST00000588190 METP08581 1390 aa21.23■□□□□ 0.99
SMAD7-206ENST00000588190 AHDC1Q5TGY3 1603 aaPredicted RBP21.23■□□□□ 0.99
SMAD7-206ENST00000588190 RXRBP28702 533 aa21.23■□□□□ 0.99
SMAD7-206ENST00000588190 DDX17Q92841 729 aaKnown RBP21.22■□□□□ 0.99
SMAD7-206ENST00000588190 LRRC59Q96AG4 307 aaKnown RBP21.2■□□□□ 0.98
SMAD7-206ENST00000588190 SHPRHQ149N8 1683 aa21.19■□□□□ 0.98
SMAD7-206ENST00000588190 C8orf37Q96NL8 207 aa21.19■□□□□ 0.98
SMAD7-206ENST00000588190 ASXL1Q8IXJ9 1541 aa21.19■□□□□ 0.98
SMAD7-206ENST00000588190 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
SMAD7-206ENST00000588190 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
SMAD7-206ENST00000588190 AFF2P51816 1311 aa21.18■□□□□ 0.98
SMAD7-206ENST00000588190 DCCP43146 1447 aa21.18■□□□□ 0.98
SMAD7-206ENST00000588190 MST1RQ04912 1400 aa21.17■□□□□ 0.98
SMAD7-206ENST00000588190 CLTCL1P53675 1640 aa21.17■□□□□ 0.98
SMAD7-206ENST00000588190 XRN1Q8IZH2 1706 aaKnown RBP21.17■□□□□ 0.98
SMAD7-206ENST00000588190 KIF1BO60333 1816 aa21.16■□□□□ 0.98
SMAD7-206ENST00000588190 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
SMAD7-206ENST00000588190 ADAMTS2O95450 1211 aa21.15■□□□□ 0.98
SMAD7-206ENST00000588190 SLC4A1APQ9BWU0 796 aaKnown RBP21.15■□□□□ 0.98
SMAD7-206ENST00000588190 UPF1Q92900 1129 aaKnown RBP eCLIP21.14■□□□□ 0.97
SMAD7-206ENST00000588190 ADGRL3Q9HAR2 1447 aa21.13■□□□□ 0.97
SMAD7-206ENST00000588190 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
SMAD7-206ENST00000588190 NGLY1Q96IV0 654 aa21.12■□□□□ 0.97
SMAD7-206ENST00000588190 QTRT2Q9H974 415 aaKnown RBP21.11■□□□□ 0.97
SMAD7-206ENST00000588190 NAIPQ13075 1403 aa21.11■□□□□ 0.97
SMAD7-206ENST00000588190 SETD5Q9C0A6 1442 aa21.11■□□□□ 0.97
SMAD7-206ENST00000588190 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
SMAD7-206ENST00000588190 NHSL1Q5SYE7 1610 aa21.08■□□□□ 0.97
SMAD7-206ENST00000588190 NALCNQ8IZF0 1738 aa21.08■□□□□ 0.97
SMAD7-206ENST00000588190 RRBP1Q9P2E9 1410 aaKnown RBP21.07■□□□□ 0.96
SMAD7-206ENST00000588190 FOXD1Q16676 465 aa21.07■□□□□ 0.96
SMAD7-206ENST00000588190 PNPLA6Q8IY17 1366 aa21.07■□□□□ 0.96
SMAD7-206ENST00000588190 RGL3Q3MIN7 710 aa21.06■□□□□ 0.96
SMAD7-206ENST00000588190 ROBO2Q9HCK4 1378 aa21.06■□□□□ 0.96
SMAD7-206ENST00000588190 C1orf167Q5SNV9 1468 aa21.06■□□□□ 0.96
SMAD7-206ENST00000588190 RBM6P78332 1123 aaKnown RBP21.05■□□□□ 0.96
SMAD7-206ENST00000588190 STK26Q9P289 416 aa21.05■□□□□ 0.96
SMAD7-206ENST00000588190 RPGRIP1LQ68CZ1 1315 aa21.04■□□□□ 0.96
SMAD7-206ENST00000588190 ESCO1Q5FWF5 840 aa21.03■□□□□ 0.96
SMAD7-206ENST00000588190 NUTM2FA1L443 756 aa21.02■□□□□ 0.96
SMAD7-206ENST00000588190 USP21Q9UK80 565 aa21.01■□□□□ 0.95
SMAD7-206ENST00000588190 PTCH1Q13635 1447 aa21■□□□□ 0.95
SMAD7-206ENST00000588190 HFM1A2PYH4 1435 aa20.99■□□□□ 0.95
SMAD7-206ENST00000588190 XPCQ01831 940 aaPredicted RBP20.99■□□□□ 0.95
SMAD7-206ENST00000588190 CDK12Q9NYV4 1490 aaPredicted RBP20.98■□□□□ 0.95
SMAD7-206ENST00000588190 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms