RNA–Protein interactions for RNA: ENST00000588040.1

AC093227.1-201, humanhuman

TSL 3 BASIC

Gene AC093227.1, Length 1,360 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC093227.1-201ENST00000588040 ANKK1Q8NFD2 765 aa13.53□□□□□ -0.24
AC093227.1-201ENST00000588040 HDGFP51858 240 aaKnown RBP13.51□□□□□ -0.25
AC093227.1-201ENST00000588040 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
AC093227.1-201ENST00000588040 ZNF775Q96BV0 537 aaPredicted RBP13.51□□□□□ -0.25
AC093227.1-201ENST00000588040 DNAJB2P25686 324 aa13.5□□□□□ -0.25
AC093227.1-201ENST00000588040 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
AC093227.1-201ENST00000588040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.49□□□□□ -0.25
AC093227.1-201ENST00000588040 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
AC093227.1-201ENST00000588040 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
AC093227.1-201ENST00000588040 SOWAHBA6NEL2 793 aa13.47□□□□□ -0.25
AC093227.1-201ENST00000588040 SAMD7Q7Z3H4 446 aa13.47□□□□□ -0.25
AC093227.1-201ENST00000588040 LRCH3Q96II8 777 aa13.47□□□□□ -0.25
AC093227.1-201ENST00000588040 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.46□□□□□ -0.25
AC093227.1-201ENST00000588040 TMEM134Q9H6X4 195 aa13.45□□□□□ -0.26
AC093227.1-201ENST00000588040 SWT1Q5T5J6 900 aaKnown RBP13.44□□□□□ -0.26
AC093227.1-201ENST00000588040 PHOX2BQ99453 314 aa13.44□□□□□ -0.26
AC093227.1-201ENST00000588040 BCAMP50895 628 aa13.43□□□□□ -0.26
AC093227.1-201ENST00000588040 AK7Q96M32 723 aa13.42□□□□□ -0.26
AC093227.1-201ENST00000588040 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
AC093227.1-201ENST00000588040 SLC24A3Q9HC58 644 aa13.41□□□□□ -0.26
AC093227.1-201ENST00000588040 NRG2O14511 850 aaPredicted RBP13.4□□□□□ -0.26
AC093227.1-201ENST00000588040 PRKCSHP14314 528 aaPredicted RBP13.4□□□□□ -0.26
AC093227.1-201ENST00000588040 SLF2Q8IX21 1173 aa13.4□□□□□ -0.26
AC093227.1-201ENST00000588040 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
AC093227.1-201ENST00000588040 TSR3Q9UJK0 312 aaKnown RBP13.39□□□□□ -0.27
AC093227.1-201ENST00000588040 HPS5Q9UPZ3 1129 aa13.38□□□□□ -0.27
AC093227.1-201ENST00000588040 NLRP7Q8WX94 980 aa13.37□□□□□ -0.27
AC093227.1-201ENST00000588040 PPP4CP60510 307 aa13.36□□□□□ -0.27
AC093227.1-201ENST00000588040 RNF40O75150 1001 aa13.35□□□□□ -0.27
AC093227.1-201ENST00000588040 KCNC4Q03721 635 aa13.35□□□□□ -0.27
AC093227.1-201ENST00000588040 NECTIN2Q92692 538 aa13.35□□□□□ -0.27
AC093227.1-201ENST00000588040 TRIM66O15016 1216 aa13.34□□□□□ -0.27
AC093227.1-201ENST00000588040 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.27
AC093227.1-201ENST00000588040 AMHR2Q16671 573 aa13.33□□□□□ -0.27
AC093227.1-201ENST00000588040 WBP1LQ9NX94 342 aa13.33□□□□□ -0.27
AC093227.1-201ENST00000588040 CLCN1P35523 988 aa13.32□□□□□ -0.28
AC093227.1-201ENST00000588040 NYAP1Q6ZVC0 841 aa13.32□□□□□ -0.28
AC093227.1-201ENST00000588040 RSPH4AQ5TD94 716 aa13.32□□□□□ -0.28
AC093227.1-201ENST00000588040 SULF1Q8IWU6 871 aa13.31□□□□□ -0.28
AC093227.1-201ENST00000588040 ZCCHC6Q5VYS8 1495 aaKnown RBP13.31□□□□□ -0.28
AC093227.1-201ENST00000588040 GPCPD1Q9NPB8 672 aa13.3□□□□□ -0.28
AC093227.1-201ENST00000588040 TMUB1Q9BVT8 246 aa13.29□□□□□ -0.28
AC093227.1-201ENST00000588040 DDX11L8A8MPP1 907 aa13.27□□□□□ -0.29
AC093227.1-201ENST00000588040 SLC10A3P09131 477 aa13.27□□□□□ -0.29
AC093227.1-201ENST00000588040 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
AC093227.1-201ENST00000588040 PDE4DQ08499 809 aa13.25□□□□□ -0.29
AC093227.1-201ENST00000588040 RDH13Q8NBN7 331 aa13.24□□□□□ -0.29
AC093227.1-201ENST00000588040 REPIN1Q9BWE0 567 aaKnown RBP13.24□□□□□ -0.29
AC093227.1-201ENST00000588040 PRR14Q9BWN1 585 aa13.24□□□□□ -0.29
AC093227.1-201ENST00000588040 FAM217BQ9NTX9 383 aaPredicted RBP13.23□□□□□ -0.29
AC093227.1-201ENST00000588040 APLP1P51693 650 aa13.22□□□□□ -0.29
AC093227.1-201ENST00000588040 PARP9Q8IXQ6 854 aa13.22□□□□□ -0.29
AC093227.1-201ENST00000588040 CFHP08603 1231 aa13.21□□□□□ -0.29
AC093227.1-201ENST00000588040 KMT5BQ4FZB7 885 aa13.21□□□□□ -0.29
AC093227.1-201ENST00000588040 GIGYF2Q6Y7W6 1299 aaKnown RBP13.2□□□□□ -0.3
AC093227.1-201ENST00000588040 CD46P15529 392 aa13.2□□□□□ -0.3
AC093227.1-201ENST00000588040 SSTR3P32745 418 aaPredicted RBP13.2□□□□□ -0.3
AC093227.1-201ENST00000588040 PRKD2Q9BZL6 878 aa13.2□□□□□ -0.3
AC093227.1-201ENST00000588040 LOC100996750A0A140TA64 210 aa13.18□□□□□ -0.3
AC093227.1-201ENST00000588040 GCGRP47871 477 aa13.18□□□□□ -0.3
AC093227.1-201ENST00000588040 KRTAP4-6Q9BYQ5 205 aa13.18□□□□□ -0.3
AC093227.1-201ENST00000588040 ABCC9O60706 1549 aa13.17□□□□□ -0.3
AC093227.1-201ENST00000588040 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
AC093227.1-201ENST00000588040 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
AC093227.1-201ENST00000588040 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
AC093227.1-201ENST00000588040 V9GY48 417 aaPredicted RBP13.11□□□□□ -0.31
AC093227.1-201ENST00000588040 MS4A1P11836 297 aa13.1□□□□□ -0.31
AC093227.1-201ENST00000588040 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
AC093227.1-201ENST00000588040 GPBP1L1Q9HC44 474 aaPredicted RBP13.1□□□□□ -0.31
AC093227.1-201ENST00000588040 TJAP1Q5JTD0 557 aa13.09□□□□□ -0.31
AC093227.1-201ENST00000588040 MTRQ99707 1265 aa13.09□□□□□ -0.31
AC093227.1-201ENST00000588040 KDM4AO75164 1064 aa13.08□□□□□ -0.31
AC093227.1-201ENST00000588040 FUT2Q10981 343 aa13.08□□□□□ -0.31
AC093227.1-201ENST00000588040 BEGAINQ9BUH8 593 aa13.08□□□□□ -0.31
AC093227.1-201ENST00000588040 KDM4CQ9H3R0 1056 aa13.08□□□□□ -0.31
AC093227.1-201ENST00000588040 IL21Q9HBE4 155 aa13.08□□□□□ -0.31
AC093227.1-201ENST00000588040 ATP6V1AP38606 617 aa13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 USP46P62068 366 aa13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 NEUROD2Q15784 382 aa13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 GRIPAP1Q4V328 841 aa13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 LCE2AQ5TA79 106 aaPredicted RBP13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
AC093227.1-201ENST00000588040 COPS2P61201 443 aa13.06□□□□□ -0.32
AC093227.1-201ENST00000588040 BLOC1S3Q6QNY0 202 aa13.06□□□□□ -0.32
AC093227.1-201ENST00000588040 NR1I2O75469 434 aa13.04□□□□□ -0.32
AC093227.1-201ENST00000588040 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
AC093227.1-201ENST00000588040 MORN1Q5T089 497 aa13.04□□□□□ -0.32
AC093227.1-201ENST00000588040 MYO15BQ96JP2 1530 aa13.03□□□□□ -0.32
AC093227.1-201ENST00000588040 TREML4Q6UXN2 200 aa13.03□□□□□ -0.32
AC093227.1-201ENST00000588040 ZPR1O75312 459 aa13.02□□□□□ -0.33
AC093227.1-201ENST00000588040 DIXDC1Q155Q3 683 aa13.02□□□□□ -0.33
AC093227.1-201ENST00000588040 SPIRE2Q8WWL2 714 aa13.01□□□□□ -0.33
AC093227.1-201ENST00000588040 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
AC093227.1-201ENST00000588040 HOXA2O43364 376 aa13□□□□□ -0.33
AC093227.1-201ENST00000588040 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
AC093227.1-201ENST00000588040 TBC1D2Q9BYX2 928 aa12.98□□□□□ -0.33
AC093227.1-201ENST00000588040 FAM117AQ9C073 453 aa12.98□□□□□ -0.33
AC093227.1-201ENST00000588040 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
AC093227.1-201ENST00000588040 DDRGK1Q96HY6 314 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms