RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 ZFYVE9O95405 1425 aa26.11■■□□□ 1.77
SF3A2-203ENST00000587637 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
SF3A2-203ENST00000587637 IQGAP3Q86VI3 1631 aa26.08■■□□□ 1.77
SF3A2-203ENST00000587637 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
SF3A2-203ENST00000587637 RIMS2Q9UQ26 1411 aa26.05■■□□□ 1.76
SF3A2-203ENST00000587637 NKTRP30414 1462 aaKnown RBP26.05■■□□□ 1.76
SF3A2-203ENST00000587637 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
SF3A2-203ENST00000587637 CHD2O14647 1828 aaKnown RBP26.04■■□□□ 1.76
SF3A2-203ENST00000587637 KCNA6P17658 529 aa26.03■■□□□ 1.76
SF3A2-203ENST00000587637 SLC52A1Q9NWF4 448 aa26.01■■□□□ 1.75
SF3A2-203ENST00000587637 PLEKHG1Q9ULL1 1385 aa26■■□□□ 1.75
SF3A2-203ENST00000587637 ITGAEP38570 1179 aa26■■□□□ 1.75
SF3A2-203ENST00000587637 NUTM2DQ5VT03 806 aaPredicted RBP26■■□□□ 1.75
SF3A2-203ENST00000587637 BCANQ96GW7 911 aa26■■□□□ 1.75
SF3A2-203ENST00000587637 ROCK1Q13464 1354 aa25.99■■□□□ 1.75
SF3A2-203ENST00000587637 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
SF3A2-203ENST00000587637 CHGAP10645 457 aaKnown RBP25.97■■□□□ 1.75
SF3A2-203ENST00000587637 FAM135BQ49AJ0 1406 aa25.97■■□□□ 1.75
SF3A2-203ENST00000587637 PPP1R15AO75807 674 aaPredicted RBP25.95■■□□□ 1.74
SF3A2-203ENST00000587637 ADAMTS13Q76LX8 1427 aa25.95■■□□□ 1.74
SF3A2-203ENST00000587637 PHLPP1O60346 1717 aa25.93■■□□□ 1.74
SF3A2-203ENST00000587637 SPHKAPQ2M3C7 1700 aa25.93■■□□□ 1.74
SF3A2-203ENST00000587637 RGS17Q9UGC6 210 aaPredicted RBP25.92■■□□□ 1.74
SF3A2-203ENST00000587637 NUP155O75694 1391 aa25.91■■□□□ 1.74
SF3A2-203ENST00000587637 MSH6P52701 1360 aa25.9■■□□□ 1.74
SF3A2-203ENST00000587637 NRXN3Q9Y4C0 1643 aa25.89■■□□□ 1.74
SF3A2-203ENST00000587637 DIP2AQ14689 1571 aa25.89■■□□□ 1.73
SF3A2-203ENST00000587637 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.86■■□□□ 1.73
SF3A2-203ENST00000587637 COL16A1Q07092 1604 aaPredicted RBP25.86■■□□□ 1.73
SF3A2-203ENST00000587637 PTPRUQ92729 1446 aa25.85■■□□□ 1.73
SF3A2-203ENST00000587637 CLTCL1P53675 1640 aa25.84■■□□□ 1.73
SF3A2-203ENST00000587637 TRPM2O94759 1503 aa25.83■■□□□ 1.72
SF3A2-203ENST00000587637 SETD1AO15047 1707 aaKnown RBP25.82■■□□□ 1.72
SF3A2-203ENST00000587637 XRN1Q8IZH2 1706 aaKnown RBP25.82■■□□□ 1.72
SF3A2-203ENST00000587637 TBX22Q9Y458 520 aa25.79■■□□□ 1.72
SF3A2-203ENST00000587637 SLAIN2Q9P270 581 aa25.78■■□□□ 1.72
SF3A2-203ENST00000587637 POTEAQ6S8J7 498 aa25.77■■□□□ 1.72
SF3A2-203ENST00000587637 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.77■■□□□ 1.72
SF3A2-203ENST00000587637 SETBP1Q9Y6X0 1596 aa25.77■■□□□ 1.72
SF3A2-203ENST00000587637 LRP6O75581 1613 aa25.75■■□□□ 1.71
SF3A2-203ENST00000587637 C14orf37Q86TY3 774 aa25.75■■□□□ 1.71
SF3A2-203ENST00000587637 NEXMIFQ5QGS0 1516 aa25.74■■□□□ 1.71
SF3A2-203ENST00000587637 RRBP1Q9P2E9 1410 aaKnown RBP25.74■■□□□ 1.71
SF3A2-203ENST00000587637 HDGFP51858 240 aaKnown RBP25.73■■□□□ 1.71
SF3A2-203ENST00000587637 AHDC1Q5TGY3 1603 aaPredicted RBP25.73■■□□□ 1.71
SF3A2-203ENST00000587637 PIK3R4Q99570 1358 aa25.71■■□□□ 1.71
SF3A2-203ENST00000587637 NAIPQ13075 1403 aa25.71■■□□□ 1.71
SF3A2-203ENST00000587637 NCOA3Q9Y6Q9 1424 aa25.7■■□□□ 1.7
SF3A2-203ENST00000587637 JCADQ9P266 1359 aa25.69■■□□□ 1.7
SF3A2-203ENST00000587637 NALCNQ8IZF0 1738 aa25.69■■□□□ 1.7
SF3A2-203ENST00000587637 AMOTL2Q9Y2J4 779 aa25.69■■□□□ 1.7
SF3A2-203ENST00000587637 KIF1BO60333 1816 aa25.69■■□□□ 1.7
SF3A2-203ENST00000587637 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
SF3A2-203ENST00000587637 METP08581 1390 aa25.68■■□□□ 1.7
SF3A2-203ENST00000587637 ZNF326Q5BKZ1 582 aaKnown RBP25.67■■□□□ 1.7
SF3A2-203ENST00000587637 ASXL1Q8IXJ9 1541 aa25.65■■□□□ 1.7
SF3A2-203ENST00000587637 NHSL1Q5SYE7 1610 aa25.63■■□□□ 1.69
SF3A2-203ENST00000587637 ATF3P18847 181 aa25.62■■□□□ 1.69
SF3A2-203ENST00000587637 MST1RQ04912 1400 aa25.62■■□□□ 1.69
SF3A2-203ENST00000587637 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
SF3A2-203ENST00000587637 C19orf44Q9H6X5 657 aa25.61■■□□□ 1.69
SF3A2-203ENST00000587637 BRINP3Q76B58 766 aa25.6■■□□□ 1.69
SF3A2-203ENST00000587637 DCCP43146 1447 aa25.58■■□□□ 1.69
SF3A2-203ENST00000587637 PPLO60437 1756 aa25.56■■□□□ 1.68
SF3A2-203ENST00000587637 ADGRL3Q9HAR2 1447 aa25.56■■□□□ 1.68
SF3A2-203ENST00000587637 HFM1A2PYH4 1435 aa25.55■■□□□ 1.68
SF3A2-203ENST00000587637 DDX17Q92841 729 aaKnown RBP25.54■■□□□ 1.68
SF3A2-203ENST00000587637 TRIM52Q96A61 297 aa25.52■■□□□ 1.68
SF3A2-203ENST00000587637 MEX3CQ5U5Q3 659 aaKnown RBP25.51■■□□□ 1.67
SF3A2-203ENST00000587637 SPATA31A6Q5VVP1 1343 aa25.51■■□□□ 1.67
SF3A2-203ENST00000587637 NUTM2BA6NNL0 878 aaPredicted RBP25.49■■□□□ 1.67
SF3A2-203ENST00000587637 NUTM2EB1AL46 878 aaPredicted RBP25.49■■□□□ 1.67
SF3A2-203ENST00000587637 NUTM2AQ8IVF1 878 aaPredicted RBP25.49■■□□□ 1.67
SF3A2-203ENST00000587637 ROBO2Q9HCK4 1378 aa25.48■■□□□ 1.67
SF3A2-203ENST00000587637 FOXD1Q16676 465 aa25.48■■□□□ 1.67
SF3A2-203ENST00000587637 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
SF3A2-203ENST00000587637 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
SF3A2-203ENST00000587637 C1orf167Q5SNV9 1468 aa25.43■■□□□ 1.66
SF3A2-203ENST00000587637 SLC4A1APQ9BWU0 796 aaKnown RBP25.43■■□□□ 1.66
SF3A2-203ENST00000587637 IFT172Q9UG01 1749 aa25.43■■□□□ 1.66
SF3A2-203ENST00000587637 PNPLA6Q8IY17 1366 aa25.42■■□□□ 1.66
SF3A2-203ENST00000587637 LAMC1P11047 1609 aa25.4■■□□□ 1.66
SF3A2-203ENST00000587637 AFF2P51816 1311 aa25.37■■□□□ 1.65
SF3A2-203ENST00000587637 PRAG1Q86YV5 1406 aa25.37■■□□□ 1.65
SF3A2-203ENST00000587637 ZNF772Q68DY9 489 aaPredicted RBP25.35■■□□□ 1.65
SF3A2-203ENST00000587637 ORAI2Q96SN7 254 aa25.34■■□□□ 1.65
SF3A2-203ENST00000587637 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
SF3A2-203ENST00000587637 VGFO15240 615 aaPredicted RBP25.33■■□□□ 1.65
SF3A2-203ENST00000587637 CDC42BPGQ6DT37 1551 aa25.32■■□□□ 1.64
SF3A2-203ENST00000587637 SPATA31E1Q6ZUB1 1445 aa25.32■■□□□ 1.64
SF3A2-203ENST00000587637 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
SF3A2-203ENST00000587637 CCDC144AA2RUR9 1427 aa25.3■■□□□ 1.64
SF3A2-203ENST00000587637 RGS12O14924 1447 aa25.3■■□□□ 1.64
SF3A2-203ENST00000587637 KNDC1Q76NI1 1749 aa25.3■■□□□ 1.64
SF3A2-203ENST00000587637 RPGRIP1LQ68CZ1 1315 aa25.3■■□□□ 1.64
SF3A2-203ENST00000587637 LRRC59Q96AG4 307 aaKnown RBP25.29■■□□□ 1.64
SF3A2-203ENST00000587637 RGL3Q3MIN7 710 aa25.27■■□□□ 1.64
SF3A2-203ENST00000587637 PLEKHH1Q9ULM0 1364 aa25.27■■□□□ 1.64
SF3A2-203ENST00000587637 COL22A1Q8NFW1 1626 aaPredicted RBP25.26■■□□□ 1.63
SF3A2-203ENST00000587637 ADAMTS2O95450 1211 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms