RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 EFCAB6Q5THR3 1501 aa9.92□□□□□ -0.82
SDF2-205ENST00000587629 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
SDF2-205ENST00000587629 PPARGC1BQ86YN6 1023 aaKnown RBP9.91□□□□□ -0.82
SDF2-205ENST00000587629 SYNMO15061 1565 aa9.91□□□□□ -0.82
SDF2-205ENST00000587629 LMTK2Q8IWU2 1503 aa9.91□□□□□ -0.82
SDF2-205ENST00000587629 ANKRD50Q9ULJ7 1429 aa9.9□□□□□ -0.82
SDF2-205ENST00000587629 TMEM94Q12767 1356 aa9.9□□□□□ -0.82
SDF2-205ENST00000587629 CHGAP10645 457 aaKnown RBP9.9□□□□□ -0.82
SDF2-205ENST00000587629 KCNA6P17658 529 aa9.9□□□□□ -0.82
SDF2-205ENST00000587629 ITGAEP38570 1179 aa9.9□□□□□ -0.82
SDF2-205ENST00000587629 NOS1P29475 1434 aa9.9□□□□□ -0.83
SDF2-205ENST00000587629 PPP1R15AO75807 674 aaPredicted RBP9.89□□□□□ -0.83
SDF2-205ENST00000587629 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
SDF2-205ENST00000587629 SLC52A1Q9NWF4 448 aa9.89□□□□□ -0.83
SDF2-205ENST00000587629 ADGRL2O95490 1459 aa9.89□□□□□ -0.83
SDF2-205ENST00000587629 XIRP1Q702N8 1843 aaKnown RBP9.87□□□□□ -0.83
SDF2-205ENST00000587629 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
SDF2-205ENST00000587629 TET3O43151 1660 aa9.87□□□□□ -0.83
SDF2-205ENST00000587629 RIMS2Q9UQ26 1411 aa9.85□□□□□ -0.83
SDF2-205ENST00000587629 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
SDF2-205ENST00000587629 RGS17Q9UGC6 210 aaPredicted RBP9.85□□□□□ -0.83
SDF2-205ENST00000587629 KDM5AP29375 1690 aaKnown RBP9.85□□□□□ -0.83
SDF2-205ENST00000587629 FAM135BQ49AJ0 1406 aa9.84□□□□□ -0.83
SDF2-205ENST00000587629 C14orf37Q86TY3 774 aa9.84□□□□□ -0.83
SDF2-205ENST00000587629 SLAIN2Q9P270 581 aa9.84□□□□□ -0.83
SDF2-205ENST00000587629 RPRD2Q5VT52 1461 aaKnown RBP9.84□□□□□ -0.83
SDF2-205ENST00000587629 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
SDF2-205ENST00000587629 CAPN15O75808 1086 aa9.83□□□□□ -0.84
SDF2-205ENST00000587629 NUP155O75694 1391 aa9.83□□□□□ -0.84
SDF2-205ENST00000587629 MSH6P52701 1360 aa9.83□□□□□ -0.84
SDF2-205ENST00000587629 PLEKHG1Q9ULL1 1385 aa9.83□□□□□ -0.84
SDF2-205ENST00000587629 DSG3P32926 999 aa9.82□□□□□ -0.84
SDF2-205ENST00000587629 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.82□□□□□ -0.84
SDF2-205ENST00000587629 MYO5BQ9ULV0 1848 aa9.82□□□□□ -0.84
SDF2-205ENST00000587629 TMEM131LA2VDJ0 1609 aa9.82□□□□□ -0.84
SDF2-205ENST00000587629 GCC2Q8IWJ2 1684 aa9.81□□□□□ -0.84
SDF2-205ENST00000587629 ROBO1Q9Y6N7 1651 aa9.81□□□□□ -0.84
SDF2-205ENST00000587629 NKTRP30414 1462 aaKnown RBP9.81□□□□□ -0.84
SDF2-205ENST00000587629 TBX22Q9Y458 520 aa9.81□□□□□ -0.84
SDF2-205ENST00000587629 UNC13BO14795 1591 aa9.8□□□□□ -0.84
SDF2-205ENST00000587629 ROCK1Q13464 1354 aa9.8□□□□□ -0.84
SDF2-205ENST00000587629 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
SDF2-205ENST00000587629 E9PCH4 1651 aa9.8□□□□□ -0.84
SDF2-205ENST00000587629 NWD1Q149M9 1564 aa9.8□□□□□ -0.84
SDF2-205ENST00000587629 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
SDF2-205ENST00000587629 ATF3P18847 181 aa9.78□□□□□ -0.84
SDF2-205ENST00000587629 ZNF326Q5BKZ1 582 aaKnown RBP9.78□□□□□ -0.84
SDF2-205ENST00000587629 AMOTL2Q9Y2J4 779 aa9.78□□□□□ -0.84
SDF2-205ENST00000587629 CHD2O14647 1828 aaKnown RBP9.77□□□□□ -0.84
SDF2-205ENST00000587629 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
SDF2-205ENST00000587629 IQGAP3Q86VI3 1631 aa9.77□□□□□ -0.85
SDF2-205ENST00000587629 NPM3O75607 178 aaKnown RBP9.76□□□□□ -0.85
SDF2-205ENST00000587629 C19orf44Q9H6X5 657 aa9.76□□□□□ -0.85
SDF2-205ENST00000587629 PHLPP1O60346 1717 aa9.76□□□□□ -0.85
SDF2-205ENST00000587629 CADPS2Q86UW7 1296 aa9.75□□□□□ -0.85
SDF2-205ENST00000587629 JCADQ9P266 1359 aa9.75□□□□□ -0.85
SDF2-205ENST00000587629 PTPRUQ92729 1446 aa9.74□□□□□ -0.85
SDF2-205ENST00000587629 MEX3CQ5U5Q3 659 aaKnown RBP9.74□□□□□ -0.85
SDF2-205ENST00000587629 NUTM2BA6NNL0 878 aaPredicted RBP9.73□□□□□ -0.85
SDF2-205ENST00000587629 NUTM2EB1AL46 878 aaPredicted RBP9.73□□□□□ -0.85
SDF2-205ENST00000587629 NUTM2AQ8IVF1 878 aaPredicted RBP9.73□□□□□ -0.85
SDF2-205ENST00000587629 TRIM52Q96A61 297 aa9.73□□□□□ -0.85
SDF2-205ENST00000587629 U3KPZ7 1027 aaPredicted RBP9.73□□□□□ -0.85
SDF2-205ENST00000587629 PIK3R4Q99570 1358 aa9.73□□□□□ -0.85
SDF2-205ENST00000587629 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.73□□□□□ -0.85
SDF2-205ENST00000587629 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
SDF2-205ENST00000587629 TRPM2O94759 1503 aa9.72□□□□□ -0.85
SDF2-205ENST00000587629 DIP2AQ14689 1571 aa9.72□□□□□ -0.85
SDF2-205ENST00000587629 BRINP3Q76B58 766 aa9.72□□□□□ -0.85
SDF2-205ENST00000587629 METP08581 1390 aa9.72□□□□□ -0.85
SDF2-205ENST00000587629 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.86
SDF2-205ENST00000587629 DDX17Q92841 729 aaKnown RBP9.7□□□□□ -0.86
SDF2-205ENST00000587629 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
SDF2-205ENST00000587629 LRP6O75581 1613 aa9.7□□□□□ -0.86
SDF2-205ENST00000587629 SPHKAPQ2M3C7 1700 aa9.7□□□□□ -0.86
SDF2-205ENST00000587629 NRXN3Q9Y4C0 1643 aa9.69□□□□□ -0.86
SDF2-205ENST00000587629 CLTCL1P53675 1640 aa9.68□□□□□ -0.86
SDF2-205ENST00000587629 NAIPQ13075 1403 aa9.68□□□□□ -0.86
SDF2-205ENST00000587629 SETBP1Q9Y6X0 1596 aa9.67□□□□□ -0.86
SDF2-205ENST00000587629 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
SDF2-205ENST00000587629 ZNF772Q68DY9 489 aaPredicted RBP9.67□□□□□ -0.86
SDF2-205ENST00000587629 SLC4A1APQ9BWU0 796 aaKnown RBP9.67□□□□□ -0.86
SDF2-205ENST00000587629 SETD1AO15047 1707 aaKnown RBP9.67□□□□□ -0.86
SDF2-205ENST00000587629 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
SDF2-205ENST00000587629 MST1RQ04912 1400 aa9.66□□□□□ -0.86
SDF2-205ENST00000587629 XRN1Q8IZH2 1706 aaKnown RBP9.66□□□□□ -0.86
SDF2-205ENST00000587629 VGFO15240 615 aaPredicted RBP9.66□□□□□ -0.86
SDF2-205ENST00000587629 NEXMIFQ5QGS0 1516 aa9.66□□□□□ -0.86
SDF2-205ENST00000587629 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
SDF2-205ENST00000587629 RXRBP28702 533 aa9.65□□□□□ -0.86
SDF2-205ENST00000587629 LRRC59Q96AG4 307 aaKnown RBP9.65□□□□□ -0.86
SDF2-205ENST00000587629 DCCP43146 1447 aa9.65□□□□□ -0.87
SDF2-205ENST00000587629 AFF2P51816 1311 aa9.64□□□□□ -0.87
SDF2-205ENST00000587629 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
SDF2-205ENST00000587629 ORAI2Q96SN7 254 aa9.64□□□□□ -0.87
SDF2-205ENST00000587629 SHPRHQ149N8 1683 aa9.64□□□□□ -0.87
SDF2-205ENST00000587629 ADGRL3Q9HAR2 1447 aa9.64□□□□□ -0.87
SDF2-205ENST00000587629 ROBO2Q9HCK4 1378 aa9.63□□□□□ -0.87
SDF2-205ENST00000587629 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
SDF2-205ENST00000587629 RGL3Q3MIN7 710 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms