RNA–Protein interactions for RNA: ENST00000587578.1

SOCS3-202, Transcript of suppressor of cytokine signaling 3, humanhuman

TSL 4

Gene SOCS3, Length 361 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3-202ENST00000587578 PROSER2Q86WR7 435 aaPredicted RBP27.82■■■□□ 2.04
SOCS3-202ENST00000587578 MYO5BQ9ULV0 1848 aa27.81■■■□□ 2.04
SOCS3-202ENST00000587578 NKTRP30414 1462 aaKnown RBP27.81■■■□□ 2.04
SOCS3-202ENST00000587578 ROCK1Q13464 1354 aa27.79■■■□□ 2.04
SOCS3-202ENST00000587578 SLC52A1Q9NWF4 448 aa27.77■■■□□ 2.04
SOCS3-202ENST00000587578 GCC2Q8IWJ2 1684 aa27.77■■■□□ 2.04
SOCS3-202ENST00000587578 ZFYVE9O95405 1425 aa27.76■■■□□ 2.04
SOCS3-202ENST00000587578 RPRD2Q5VT52 1461 aaKnown RBP27.76■■■□□ 2.03
SOCS3-202ENST00000587578 ANKRD50Q9ULJ7 1429 aa27.75■■■□□ 2.03
SOCS3-202ENST00000587578 POTEAQ6S8J7 498 aa27.74■■■□□ 2.03
SOCS3-202ENST00000587578 BCANQ96GW7 911 aa27.73■■■□□ 2.03
SOCS3-202ENST00000587578 CHD2O14647 1828 aaKnown RBP27.73■■■□□ 2.03
SOCS3-202ENST00000587578 TMEM131LA2VDJ0 1609 aa27.71■■■□□ 2.03
SOCS3-202ENST00000587578 MSH6P52701 1360 aa27.71■■■□□ 2.03
SOCS3-202ENST00000587578 PLEKHG1Q9ULL1 1385 aa27.71■■■□□ 2.03
SOCS3-202ENST00000587578 RIMS2Q9UQ26 1411 aa27.7■■■□□ 2.03
SOCS3-202ENST00000587578 PHLPP1O60346 1717 aa27.69■■■□□ 2.02
SOCS3-202ENST00000587578 ITGAEP38570 1179 aa27.67■■■□□ 2.02
SOCS3-202ENST00000587578 UNC13BO14795 1591 aa27.67■■■□□ 2.02
SOCS3-202ENST00000587578 SLAIN2Q9P270 581 aa27.66■■■□□ 2.02
SOCS3-202ENST00000587578 PPP1R15AO75807 674 aaPredicted RBP27.64■■■□□ 2.02
SOCS3-202ENST00000587578 E9PCH4 1651 aa27.64■■■□□ 2.02
SOCS3-202ENST00000587578 COL16A1Q07092 1604 aaPredicted RBP27.61■■■□□ 2.01
SOCS3-202ENST00000587578 SETD1AO15047 1707 aaKnown RBP27.61■■■□□ 2.01
SOCS3-202ENST00000587578 ADAMTS13Q76LX8 1427 aa27.59■■■□□ 2.01
SOCS3-202ENST00000587578 NUTM2DQ5VT03 806 aaPredicted RBP27.59■■■□□ 2.01
SOCS3-202ENST00000587578 JCADQ9P266 1359 aa27.59■■■□□ 2.01
SOCS3-202ENST00000587578 CHGAP10645 457 aaKnown RBP27.58■■■□□ 2.01
SOCS3-202ENST00000587578 TBX22Q9Y458 520 aa27.58■■■□□ 2.01
SOCS3-202ENST00000587578 HFM1A2PYH4 1435 aa27.57■■■□□ 2
SOCS3-202ENST00000587578 IQGAP3Q86VI3 1631 aa27.56■■■□□ 2
SOCS3-202ENST00000587578 HDGFP51858 240 aaKnown RBP27.55■■■□□ 2
SOCS3-202ENST00000587578 NAIPQ13075 1403 aa27.55■■■□□ 2
SOCS3-202ENST00000587578 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.54■■■□□ 2
SOCS3-202ENST00000587578 LRP6O75581 1613 aa27.53■■■□□ 2
SOCS3-202ENST00000587578 DIP2AQ14689 1571 aa27.53■■■□□ 2
SOCS3-202ENST00000587578 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.53■■■□□ 2
SOCS3-202ENST00000587578 NCOA3Q9Y6Q9 1424 aa27.52■■■□□ 2
SOCS3-202ENST00000587578 C14orf37Q86TY3 774 aa27.51■■□□□ 1.99
SOCS3-202ENST00000587578 AHDC1Q5TGY3 1603 aaPredicted RBP27.49■■□□□ 1.99
SOCS3-202ENST00000587578 PTPRUQ92729 1446 aa27.48■■□□□ 1.99
SOCS3-202ENST00000587578 PIK3R4Q99570 1358 aa27.47■■□□□ 1.99
SOCS3-202ENST00000587578 TRPM2O94759 1503 aa27.46■■□□□ 1.99
SOCS3-202ENST00000587578 C19orf44Q9H6X5 657 aa27.45■■□□□ 1.98
SOCS3-202ENST00000587578 SHPRHQ149N8 1683 aa27.44■■□□□ 1.98
SOCS3-202ENST00000587578 NUP155O75694 1391 aa27.44■■□□□ 1.98
SOCS3-202ENST00000587578 NRXN3Q9Y4C0 1643 aa27.43■■□□□ 1.98
SOCS3-202ENST00000587578 CADPS2Q86UW7 1296 aa27.43■■□□□ 1.98
SOCS3-202ENST00000587578 ATF3P18847 181 aa27.42■■□□□ 1.98
SOCS3-202ENST00000587578 AMOTL2Q9Y2J4 779 aa27.42■■□□□ 1.98
SOCS3-202ENST00000587578 SPATA31A6Q5VVP1 1343 aa27.41■■□□□ 1.98
SOCS3-202ENST00000587578 XRN1Q8IZH2 1706 aaKnown RBP27.4■■□□□ 1.98
SOCS3-202ENST00000587578 ACIN1Q9UKV3 1341 aaKnown RBP27.4■■□□□ 1.98
SOCS3-202ENST00000587578 BRINP3Q76B58 766 aa27.38■■□□□ 1.97
SOCS3-202ENST00000587578 TRIM26Q12899 539 aaPredicted RBP27.37■■□□□ 1.97
SOCS3-202ENST00000587578 SPHKAPQ2M3C7 1700 aa27.37■■□□□ 1.97
SOCS3-202ENST00000587578 MEX3CQ5U5Q3 659 aaKnown RBP27.37■■□□□ 1.97
SOCS3-202ENST00000587578 SETD5Q9C0A6 1442 aa27.37■■□□□ 1.97
SOCS3-202ENST00000587578 SETBP1Q9Y6X0 1596 aa27.36■■□□□ 1.97
SOCS3-202ENST00000587578 DCCP43146 1447 aa27.33■■□□□ 1.97
SOCS3-202ENST00000587578 ASXL1Q8IXJ9 1541 aa27.33■■□□□ 1.97
SOCS3-202ENST00000587578 ZNF772Q68DY9 489 aaPredicted RBP27.32■■□□□ 1.96
SOCS3-202ENST00000587578 TRIM52Q96A61 297 aa27.31■■□□□ 1.96
SOCS3-202ENST00000587578 METP08581 1390 aa27.31■■□□□ 1.96
SOCS3-202ENST00000587578 MST1RQ04912 1400 aa27.31■■□□□ 1.96
SOCS3-202ENST00000587578 HRCP23327 699 aa27.3■■□□□ 1.96
SOCS3-202ENST00000587578 NHSL1Q5SYE7 1610 aa27.3■■□□□ 1.96
SOCS3-202ENST00000587578 NUTM2BA6NNL0 878 aaPredicted RBP27.29■■□□□ 1.96
SOCS3-202ENST00000587578 NUTM2EB1AL46 878 aaPredicted RBP27.29■■□□□ 1.96
SOCS3-202ENST00000587578 NUTM2AQ8IVF1 878 aaPredicted RBP27.29■■□□□ 1.96
SOCS3-202ENST00000587578 CLTCL1P53675 1640 aa27.27■■□□□ 1.96
SOCS3-202ENST00000587578 ZNF326Q5BKZ1 582 aaKnown RBP27.26■■□□□ 1.95
SOCS3-202ENST00000587578 UPF1Q92900 1129 aaKnown RBP eCLIP27.26■■□□□ 1.95
SOCS3-202ENST00000587578 RAB3GAP2Q9H2M9 1393 aa27.25■■□□□ 1.95
SOCS3-202ENST00000587578 NALCNQ8IZF0 1738 aa27.25■■□□□ 1.95
SOCS3-202ENST00000587578 NEXMIFQ5QGS0 1516 aa27.25■■□□□ 1.95
SOCS3-202ENST00000587578 DDX17Q92841 729 aaKnown RBP27.23■■□□□ 1.95
SOCS3-202ENST00000587578 ADGRL3Q9HAR2 1447 aa27.23■■□□□ 1.95
SOCS3-202ENST00000587578 RXRBP28702 533 aa27.21■■□□□ 1.95
SOCS3-202ENST00000587578 AFF2P51816 1311 aa27.2■■□□□ 1.95
SOCS3-202ENST00000587578 CDK12Q9NYV4 1490 aaPredicted RBP27.17■■□□□ 1.94
SOCS3-202ENST00000587578 PNPLA6Q8IY17 1366 aa27.16■■□□□ 1.94
SOCS3-202ENST00000587578 KIF1BO60333 1816 aa27.16■■□□□ 1.94
SOCS3-202ENST00000587578 LRRC59Q96AG4 307 aaKnown RBP27.15■■□□□ 1.94
SOCS3-202ENST00000587578 C8orf37Q96NL8 207 aa27.11■■□□□ 1.93
SOCS3-202ENST00000587578 SLC4A1APQ9BWU0 796 aaKnown RBP27.11■■□□□ 1.93
SOCS3-202ENST00000587578 C1orf167Q5SNV9 1468 aa27.11■■□□□ 1.93
SOCS3-202ENST00000587578 RGS12O14924 1447 aa27.1■■□□□ 1.93
SOCS3-202ENST00000587578 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
SOCS3-202ENST00000587578 LAMC1P11047 1609 aa27.08■■□□□ 1.93
SOCS3-202ENST00000587578 PTCH1Q13635 1447 aa27.08■■□□□ 1.93
SOCS3-202ENST00000587578 MPHOSPH9Q99550 1183 aa27.08■■□□□ 1.93
SOCS3-202ENST00000587578 QTRT2Q9H974 415 aaKnown RBP27.05■■□□□ 1.92
SOCS3-202ENST00000587578 ORAI2Q96SN7 254 aa27.04■■□□□ 1.92
SOCS3-202ENST00000587578 ADAMTS2O95450 1211 aa27.03■■□□□ 1.92
SOCS3-202ENST00000587578 RBM6P78332 1123 aaKnown RBP27.02■■□□□ 1.92
SOCS3-202ENST00000587578 PRAG1Q86YV5 1406 aa27■■□□□ 1.91
SOCS3-202ENST00000587578 SOS2Q07890 1332 aaPredicted RBP27■■□□□ 1.91
SOCS3-202ENST00000587578 PPLO60437 1756 aa26.99■■□□□ 1.91
SOCS3-202ENST00000587578 NGLY1Q96IV0 654 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms