RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 PPLO60437 1756 aa14.83□□□□□ -0.03
CLPTM1-207ENST00000587537 L3MBTL2Q969R5 705 aa14.83□□□□□ -0.04
CLPTM1-207ENST00000587537 VGFO15240 615 aaPredicted RBP14.82□□□□□ -0.04
CLPTM1-207ENST00000587537 CHGAP10645 457 aaKnown RBP14.82□□□□□ -0.04
CLPTM1-207ENST00000587537 ZNF326Q5BKZ1 582 aaKnown RBP14.82□□□□□ -0.04
CLPTM1-207ENST00000587537 MYO5BQ9ULV0 1848 aa14.82□□□□□ -0.04
CLPTM1-207ENST00000587537 SLIT1O75093 1534 aa14.82□□□□□ -0.04
CLPTM1-207ENST00000587537 PPP1R15AO75807 674 aaPredicted RBP14.81□□□□□ -0.04
CLPTM1-207ENST00000587537 NEXMIFQ5QGS0 1516 aa14.81□□□□□ -0.04
CLPTM1-207ENST00000587537 RGL3Q3MIN7 710 aa14.8□□□□□ -0.04
CLPTM1-207ENST00000587537 DCAF11Q8TEB1 546 aa14.8□□□□□ -0.04
CLPTM1-207ENST00000587537 ARHGAP23Q9P227 1491 aa14.79□□□□□ -0.04
CLPTM1-207ENST00000587537 TMEM2Q9UHN6 1383 aa14.79□□□□□ -0.04
CLPTM1-207ENST00000587537 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
CLPTM1-207ENST00000587537 KIAA1210Q9ULL0 1709 aa14.79□□□□□ -0.04
CLPTM1-207ENST00000587537 LAMC1P11047 1609 aa14.78□□□□□ -0.04
CLPTM1-207ENST00000587537 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
CLPTM1-207ENST00000587537 RIMS2Q9UQ26 1411 aa14.77□□□□□ -0.04
CLPTM1-207ENST00000587537 PRAG1Q86YV5 1406 aa14.76□□□□□ -0.05
CLPTM1-207ENST00000587537 RALGAPBQ86X10 1494 aa14.74□□□□□ -0.05
CLPTM1-207ENST00000587537 PIK3C2GO75747 1445 aa14.74□□□□□ -0.05
CLPTM1-207ENST00000587537 SCAF11Q99590 1463 aaKnown RBP14.73□□□□□ -0.05
CLPTM1-207ENST00000587537 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
CLPTM1-207ENST00000587537 TRPM1Q7Z4N2 1603 aa14.72□□□□□ -0.05
CLPTM1-207ENST00000587537 SETBP1Q9Y6X0 1596 aa14.72□□□□□ -0.05
CLPTM1-207ENST00000587537 PLEKHG1Q9ULL1 1385 aa14.72□□□□□ -0.05
CLPTM1-207ENST00000587537 KDM2AQ9Y2K7 1162 aa14.71□□□□□ -0.05
CLPTM1-207ENST00000587537 DIP2AQ14689 1571 aa14.71□□□□□ -0.05
CLPTM1-207ENST00000587537 POLR1AO95602 1720 aaPredicted RBP14.71□□□□□ -0.05
CLPTM1-207ENST00000587537 GPRASP1Q5JY77 1395 aa14.7□□□□□ -0.06
CLPTM1-207ENST00000587537 TXNDC2Q86VQ3 553 aa14.69□□□□□ -0.06
CLPTM1-207ENST00000587537 MED14O60244 1454 aa14.69□□□□□ -0.06
CLPTM1-207ENST00000587537 LMTK3Q96Q04 1460 aa14.69□□□□□ -0.06
CLPTM1-207ENST00000587537 ADGRF5Q8IZF2 1346 aa14.68□□□□□ -0.06
CLPTM1-207ENST00000587537 C14orf93Q9H972 538 aaKnown RBP14.68□□□□□ -0.06
CLPTM1-207ENST00000587537 ROCK2O75116 1388 aaKnown RBP14.67□□□□□ -0.06
CLPTM1-207ENST00000587537 NBPF8Q3BBV2 869 aa14.66□□□□□ -0.06
CLPTM1-207ENST00000587537 PIK3R4Q99570 1358 aa14.65□□□□□ -0.06
CLPTM1-207ENST00000587537 SLC24A1O60721 1099 aa14.65□□□□□ -0.06
CLPTM1-207ENST00000587537 ALKQ9UM73 1620 aa14.65□□□□□ -0.06
CLPTM1-207ENST00000587537 EIF3AQ14152 1382 aaKnown RBP14.64□□□□□ -0.07
CLPTM1-207ENST00000587537 LTKP29376 864 aa14.64□□□□□ -0.07
CLPTM1-207ENST00000587537 NRXN3Q9Y4C0 1643 aa14.63□□□□□ -0.07
CLPTM1-207ENST00000587537 IQGAP1P46940 1657 aa14.63□□□□□ -0.07
CLPTM1-207ENST00000587537 TBX22Q9Y458 520 aa14.63□□□□□ -0.07
CLPTM1-207ENST00000587537 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
CLPTM1-207ENST00000587537 ADGRB1O14514 1584 aa14.62□□□□□ -0.07
CLPTM1-207ENST00000587537 NPHP4O75161 1426 aaPredicted RBP14.62□□□□□ -0.07
CLPTM1-207ENST00000587537 CARD11Q9BXL7 1154 aa14.62□□□□□ -0.07
CLPTM1-207ENST00000587537 ADAMTS13Q76LX8 1427 aa14.6□□□□□ -0.07
CLPTM1-207ENST00000587537 EIF4G2P78344 907 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLPTM1-207ENST00000587537 CFAP70Q5T0N1 1121 aa14.6□□□□□ -0.07
CLPTM1-207ENST00000587537 BCANQ96GW7 911 aa14.6□□□□□ -0.07
CLPTM1-207ENST00000587537 DMRT2Q9Y5R5 561 aa14.6□□□□□ -0.07
CLPTM1-207ENST00000587537 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
CLPTM1-207ENST00000587537 NUTM2DQ5VT03 806 aaPredicted RBP14.59□□□□□ -0.07
CLPTM1-207ENST00000587537 DLC1Q96QB1 1528 aa14.58□□□□□ -0.08
CLPTM1-207ENST00000587537 USP47Q96K76 1375 aa14.58□□□□□ -0.08
CLPTM1-207ENST00000587537 TECPR2O15040 1411 aa14.58□□□□□ -0.08
CLPTM1-207ENST00000587537 SIRT1Q96EB6 747 aa14.57□□□□□ -0.08
CLPTM1-207ENST00000587537 LRPPRCP42704 1394 aaKnown RBP14.57□□□□□ -0.08
CLPTM1-207ENST00000587537 ABCC11Q96J66 1382 aa14.57□□□□□ -0.08
CLPTM1-207ENST00000587537 YTHDC2Q9H6S0 1430 aaKnown RBP14.57□□□□□ -0.08
CLPTM1-207ENST00000587537 NBPF1Q3BBV0 1214 aa14.56□□□□□ -0.08
CLPTM1-207ENST00000587537 STRCQ7RTU9 1775 aa14.55□□□□□ -0.08
CLPTM1-207ENST00000587537 SBNO2Q9Y2G9 1366 aa14.55□□□□□ -0.08
CLPTM1-207ENST00000587537 FAM135BQ49AJ0 1406 aa14.55□□□□□ -0.08
CLPTM1-207ENST00000587537 ASXL1Q8IXJ9 1541 aa14.55□□□□□ -0.08
CLPTM1-207ENST00000587537 PTCH1Q13635 1447 aa14.54□□□□□ -0.08
CLPTM1-207ENST00000587537 CPS1P31327 1500 aa14.54□□□□□ -0.08
CLPTM1-207ENST00000587537 CHD2O14647 1828 aaKnown RBP14.53□□□□□ -0.08
CLPTM1-207ENST00000587537 ARHGEF28Q8N1W1 1705 aaKnown RBP14.53□□□□□ -0.08
CLPTM1-207ENST00000587537 NCKAP5LQ9HCH0 1330 aa14.53□□□□□ -0.08
CLPTM1-207ENST00000587537 XRN1Q8IZH2 1706 aaKnown RBP14.52□□□□□ -0.08
CLPTM1-207ENST00000587537 NWD1Q149M9 1564 aa14.52□□□□□ -0.08
CLPTM1-207ENST00000587537 METP08581 1390 aa14.52□□□□□ -0.08
CLPTM1-207ENST00000587537 HSPA2P54652 639 aa14.52□□□□□ -0.09
CLPTM1-207ENST00000587537 NKTRP30414 1462 aaKnown RBP14.51□□□□□ -0.09
CLPTM1-207ENST00000587537 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
CLPTM1-207ENST00000587537 CENPJQ9HC77 1338 aaPredicted RBP14.5□□□□□ -0.09
CLPTM1-207ENST00000587537 TMEM132EQ6IEE7 984 aa14.5□□□□□ -0.09
CLPTM1-207ENST00000587537 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
CLPTM1-207ENST00000587537 CDCA8Q53HL2 280 aa14.49□□□□□ -0.09
CLPTM1-207ENST00000587537 KCNA6P17658 529 aa14.48□□□□□ -0.09
CLPTM1-207ENST00000587537 TRAK1Q9UPV9 953 aa14.48□□□□□ -0.09
CLPTM1-207ENST00000587537 QRICH2Q9H0J4 1663 aa14.48□□□□□ -0.09
CLPTM1-207ENST00000587537 NCOA3Q9Y6Q9 1424 aa14.48□□□□□ -0.09
CLPTM1-207ENST00000587537 ST20-MTHFSA0A0A6YYL1 179 aa14.47□□□□□ -0.09
CLPTM1-207ENST00000587537 AMOTL2Q9Y2J4 779 aa14.47□□□□□ -0.09
CLPTM1-207ENST00000587537 ZNF316A6NFI3 1004 aaPredicted RBP14.46□□□□□ -0.09
CLPTM1-207ENST00000587537 PUS7Q96PZ0 661 aaKnown RBP14.46□□□□□ -0.09
CLPTM1-207ENST00000587537 POGKQ9P215 609 aa14.46□□□□□ -0.09
CLPTM1-207ENST00000587537 TMF1P82094 1093 aa14.45□□□□□ -0.1
CLPTM1-207ENST00000587537 PTPRUQ92729 1446 aa14.45□□□□□ -0.1
CLPTM1-207ENST00000587537 STK26Q9P289 416 aa14.45□□□□□ -0.1
CLPTM1-207ENST00000587537 ADGRB2O60241 1585 aa14.44□□□□□ -0.1
CLPTM1-207ENST00000587537 PRAM1Q96QH2 718 aa14.43□□□□□ -0.1
CLPTM1-207ENST00000587537 TESK2Q96S53 571 aa14.43□□□□□ -0.1
CLPTM1-207ENST00000587537 ROBO2Q9HCK4 1378 aa14.42□□□□□ -0.1
CLPTM1-207ENST00000587537 EVC2Q86UK5 1308 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms