RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 LMTK3Q96Q04 1460 aa21.45■■□□□ 1.02
NFIX-208ENST00000587260 RIMS2Q9UQ26 1411 aa21.45■■□□□ 1.02
NFIX-208ENST00000587260 NUTM2DQ5VT03 806 aaPredicted RBP21.44■■□□□ 1.02
NFIX-208ENST00000587260 KDM2AQ9Y2K7 1162 aa21.44■■□□□ 1.02
NFIX-208ENST00000587260 TMEM2Q9UHN6 1383 aa21.44■■□□□ 1.02
NFIX-208ENST00000587260 ZFYVE9O95405 1425 aa21.43■■□□□ 1.02
NFIX-208ENST00000587260 SLIT1O75093 1534 aa21.43■■□□□ 1.02
NFIX-208ENST00000587260 MYOM2P54296 1465 aa21.43■■□□□ 1.02
NFIX-208ENST00000587260 POLR1AO95602 1720 aaPredicted RBP21.42■■□□□ 1.02
NFIX-208ENST00000587260 ARHGAP23Q9P227 1491 aa21.41■■□□□ 1.02
NFIX-208ENST00000587260 THEMISQ8N1K5 641 aaPredicted RBP21.41■■□□□ 1.02
NFIX-208ENST00000587260 RPGRIP1LQ68CZ1 1315 aa21.4■■□□□ 1.02
NFIX-208ENST00000587260 SENP3Q9H4L4 574 aaPredicted RBP21.38■■□□□ 1.01
NFIX-208ENST00000587260 IQGAP1P46940 1657 aa21.38■■□□□ 1.01
NFIX-208ENST00000587260 ADGRF5Q8IZF2 1346 aa21.36■■□□□ 1.01
NFIX-208ENST00000587260 PRAG1Q86YV5 1406 aa21.36■■□□□ 1.01
NFIX-208ENST00000587260 SCAF11Q99590 1463 aaKnown RBP21.36■■□□□ 1.01
NFIX-208ENST00000587260 NRXN1Q9ULB1 1477 aa21.36■■□□□ 1.01
NFIX-208ENST00000587260 HSPA2P54652 639 aa21.35■■□□□ 1.01
NFIX-208ENST00000587260 STAC3Q96MF2 364 aa21.35■■□□□ 1.01
NFIX-208ENST00000587260 TRPM1Q7Z4N2 1603 aa21.35■■□□□ 1.01
NFIX-208ENST00000587260 NRXN3Q9Y4C0 1643 aa21.34■■□□□ 1.01
NFIX-208ENST00000587260 LTKP29376 864 aa21.34■■□□□ 1.01
NFIX-208ENST00000587260 PIK3C2GO75747 1445 aa21.33■■□□□ 1.01
NFIX-208ENST00000587260 TXNDC2Q86VQ3 553 aa21.33■■□□□ 1
NFIX-208ENST00000587260 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.33■■□□□ 1
NFIX-208ENST00000587260 EID1Q9Y6B2 187 aa21.33■■□□□ 1
NFIX-208ENST00000587260 VGFO15240 615 aaPredicted RBP21.32■■□□□ 1
NFIX-208ENST00000587260 LAMC1P11047 1609 aa21.31■■□□□ 1
NFIX-208ENST00000587260 NBPF8Q3BBV2 869 aa21.31■■□□□ 1
NFIX-208ENST00000587260 SETBP1Q9Y6X0 1596 aa21.3■■□□□ 1
NFIX-208ENST00000587260 SETD1AO15047 1707 aaKnown RBP21.3■■□□□ 1
NFIX-208ENST00000587260 KIAA1210Q9ULL0 1709 aa21.3■■□□□ 1
NFIX-208ENST00000587260 HDGFP51858 240 aaKnown RBP21.29■■□□□ 1
NFIX-208ENST00000587260 STRCQ7RTU9 1775 aa21.29■■□□□ 1
NFIX-208ENST00000587260 PLEKHG1Q9ULL1 1385 aa21.28■■□□□ 1
NFIX-208ENST00000587260 ANKLE2Q86XL3 938 aa21.28■■□□□ 1
NFIX-208ENST00000587260 NCKAP5LQ9HCH0 1330 aa21.27■■□□□ 1
NFIX-208ENST00000587260 BCANQ96GW7 911 aa21.27■■□□□ 1
NFIX-208ENST00000587260 RALGAPBQ86X10 1494 aa21.27■■□□□ 1
NFIX-208ENST00000587260 ALKQ9UM73 1620 aa21.27■■□□□ 1
NFIX-208ENST00000587260 NPHP4O75161 1426 aaPredicted RBP21.24■□□□□ 0.99
NFIX-208ENST00000587260 CFAP70Q5T0N1 1121 aa21.24■□□□□ 0.99
NFIX-208ENST00000587260 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
NFIX-208ENST00000587260 ADAMTS13Q76LX8 1427 aa21.23■□□□□ 0.99
NFIX-208ENST00000587260 MED14O60244 1454 aa21.23■□□□□ 0.99
NFIX-208ENST00000587260 DIP2AQ14689 1571 aa21.22■□□□□ 0.99
NFIX-208ENST00000587260 ROCK2O75116 1388 aaKnown RBP21.21■□□□□ 0.99
NFIX-208ENST00000587260 ADGRB1O14514 1584 aa21.2■□□□□ 0.98
NFIX-208ENST00000587260 SLC26A8Q96RN1 970 aa21.19■□□□□ 0.98
NFIX-208ENST00000587260 NBPF1Q3BBV0 1214 aa21.19■□□□□ 0.98
NFIX-208ENST00000587260 C14orf93Q9H972 538 aaKnown RBP21.19■□□□□ 0.98
NFIX-208ENST00000587260 TMEM132EQ6IEE7 984 aa21.15■□□□□ 0.98
NFIX-208ENST00000587260 METP08581 1390 aa21.15■□□□□ 0.98
NFIX-208ENST00000587260 GPRASP1Q5JY77 1395 aa21.13■□□□□ 0.97
NFIX-208ENST00000587260 CARD11Q9BXL7 1154 aa21.13■□□□□ 0.97
NFIX-208ENST00000587260 KNDC1Q76NI1 1749 aa21.12■□□□□ 0.97
NFIX-208ENST00000587260 ARHGEF28Q8N1W1 1705 aaKnown RBP21.12■□□□□ 0.97
NFIX-208ENST00000587260 CHD2O14647 1828 aaKnown RBP21.11■□□□□ 0.97
NFIX-208ENST00000587260 XRN1Q8IZH2 1706 aaKnown RBP21.1■□□□□ 0.97
NFIX-208ENST00000587260 YTHDC2Q9H6S0 1430 aaKnown RBP21.1■□□□□ 0.97
NFIX-208ENST00000587260 TBX22Q9Y458 520 aa21.1■□□□□ 0.97
NFIX-208ENST00000587260 PTPRUQ92729 1446 aa21.09■□□□□ 0.97
NFIX-208ENST00000587260 STK26Q9P289 416 aa21.09■□□□□ 0.97
NFIX-208ENST00000587260 USP47Q96K76 1375 aa21.07■□□□□ 0.96
NFIX-208ENST00000587260 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
NFIX-208ENST00000587260 LRPPRCP42704 1394 aaKnown RBP21.06■□□□□ 0.96
NFIX-208ENST00000587260 NWD1Q149M9 1564 aa21.06■□□□□ 0.96
NFIX-208ENST00000587260 STRCP1A6NGW2 1772 aa21.06■□□□□ 0.96
NFIX-208ENST00000587260 CPS1P31327 1500 aa21.06■□□□□ 0.96
NFIX-208ENST00000587260 EIF4G2P78344 907 aaKnown RBP eCLIP21.05■□□□□ 0.96
NFIX-208ENST00000587260 TRAK1Q9UPV9 953 aa21.05■□□□□ 0.96
NFIX-208ENST00000587260 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
NFIX-208ENST00000587260 QRICH2Q9H0J4 1663 aa21.05■□□□□ 0.96
NFIX-208ENST00000587260 DLC1Q96QB1 1528 aa21.03■□□□□ 0.96
NFIX-208ENST00000587260 TECPR2O15040 1411 aa21.02■□□□□ 0.96
NFIX-208ENST00000587260 EIF3AQ14152 1382 aaKnown RBP21.02■□□□□ 0.96
NFIX-208ENST00000587260 AMOTL2Q9Y2J4 779 aa21.01■□□□□ 0.95
NFIX-208ENST00000587260 DMRT2Q9Y5R5 561 aa21.01■□□□□ 0.95
NFIX-208ENST00000587260 HSPA5P11021 654 aaKnown RBP21■□□□□ 0.95
NFIX-208ENST00000587260 HIRIP3Q9BW71 556 aaPredicted RBP21■□□□□ 0.95
NFIX-208ENST00000587260 ABCC11Q96J66 1382 aa20.99■□□□□ 0.95
NFIX-208ENST00000587260 PTCH1Q13635 1447 aa20.99■□□□□ 0.95
NFIX-208ENST00000587260 ROBO2Q9HCK4 1378 aa20.99■□□□□ 0.95
NFIX-208ENST00000587260 KCNA6P17658 529 aa20.99■□□□□ 0.95
NFIX-208ENST00000587260 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
NFIX-208ENST00000587260 ZNF335Q9H4Z2 1342 aaPredicted RBP20.97■□□□□ 0.95
NFIX-208ENST00000587260 NKTRP30414 1462 aaKnown RBP20.97■□□□□ 0.95
NFIX-208ENST00000587260 ST20-MTHFSA0A0A6YYL1 179 aa20.96■□□□□ 0.95
NFIX-208ENST00000587260 SAFB2Q14151 953 aaKnown RBP eCLIP20.96■□□□□ 0.95
NFIX-208ENST00000587260 PRAM1Q96QH2 718 aa20.96■□□□□ 0.95
NFIX-208ENST00000587260 CENPJQ9HC77 1338 aaPredicted RBP20.95■□□□□ 0.94
NFIX-208ENST00000587260 FAM135BQ49AJ0 1406 aa20.95■□□□□ 0.94
NFIX-208ENST00000587260 WAPLQ7Z5K2 1190 aa20.94■□□□□ 0.94
NFIX-208ENST00000587260 POGKQ9P215 609 aa20.94■□□□□ 0.94
NFIX-208ENST00000587260 NALCNQ8IZF0 1738 aa20.94■□□□□ 0.94
NFIX-208ENST00000587260 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.94■□□□□ 0.94
NFIX-208ENST00000587260 XIRP1Q702N8 1843 aaKnown RBP20.91■□□□□ 0.94
NFIX-208ENST00000587260 RBM33Q96EV2 1170 aaKnown RBP20.91■□□□□ 0.94
NFIX-208ENST00000587260 MINK1Q8N4C8 1332 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms