RNA–Protein interactions for RNA: ENST00000587235.5

TCF3-210, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-210ENST00000587235 IQGAP3Q86VI3 1631 aa38.45■■■■□ 3.75
TCF3-210ENST00000587235 SENP3Q9H4L4 574 aaPredicted RBP38.44■■■■□ 3.74
TCF3-210ENST00000587235 ZFYVE9O95405 1425 aa38.42■■■■□ 3.74
TCF3-210ENST00000587235 RIMS2Q9UQ26 1411 aa38.42■■■■□ 3.74
TCF3-210ENST00000587235 MYO5BQ9ULV0 1848 aa38.41■■■■□ 3.74
TCF3-210ENST00000587235 PPP1R15AO75807 674 aaPredicted RBP38.41■■■■□ 3.74
TCF3-210ENST00000587235 TMEM131LA2VDJ0 1609 aa38.41■■■■□ 3.74
TCF3-210ENST00000587235 PROSER2Q86WR7 435 aaPredicted RBP38.39■■■■□ 3.74
TCF3-210ENST00000587235 RRBP1Q9P2E9 1410 aaKnown RBP38.38■■■■□ 3.74
TCF3-210ENST00000587235 TMEM94Q12767 1356 aa38.37■■■■□ 3.73
TCF3-210ENST00000587235 PLEKHG1Q9ULL1 1385 aa38.37■■■■□ 3.73
TCF3-210ENST00000587235 XIRP1Q702N8 1843 aaKnown RBP38.37■■■■□ 3.73
TCF3-210ENST00000587235 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.35■■■■□ 3.732e-9■□□□□ 11.3
TCF3-210ENST00000587235 RBM33Q96EV2 1170 aaKnown RBP38.33■■■■□ 3.73
TCF3-210ENST00000587235 NUTM2DQ5VT03 806 aaPredicted RBP38.31■■■■□ 3.72
TCF3-210ENST00000587235 TBX22Q9Y458 520 aa38.28■■■■□ 3.72
TCF3-210ENST00000587235 SOCS7O14512 581 aa38.26■■■■□ 3.72
TCF3-210ENST00000587235 NWD1Q149M9 1564 aa38.23■■■■□ 3.71
TCF3-210ENST00000587235 NKTRP30414 1462 aaKnown RBP38.23■■■■□ 3.71
TCF3-210ENST00000587235 NAIPQ13075 1403 aa38.22■■■■□ 3.71
TCF3-210ENST00000587235 MED1Q15648 1581 aaPredicted RBP38.21■■■■□ 3.71
TCF3-210ENST00000587235 FAM135BQ49AJ0 1406 aa38.18■■■■□ 3.7
TCF3-210ENST00000587235 CHD2O14647 1828 aaKnown RBP38.17■■■■□ 3.7
TCF3-210ENST00000587235 ADAMTS13Q76LX8 1427 aa38.17■■■■□ 3.7
TCF3-210ENST00000587235 MSH6P52701 1360 aa38.14■■■■□ 3.7
TCF3-210ENST00000587235 SPHKAPQ2M3C7 1700 aa38.12■■■■□ 3.69
TCF3-210ENST00000587235 ZNF326Q5BKZ1 582 aaKnown RBP38.11■■■■□ 3.69
TCF3-210ENST00000587235 TRIM52Q96A61 297 aa38.11■■■■□ 3.69
TCF3-210ENST00000587235 PIK3R4Q99570 1358 aa38.07■■■■□ 3.69
TCF3-210ENST00000587235 HFM1A2PYH4 1435 aa38.06■■■■□ 3.68
TCF3-210ENST00000587235 PHF23Q9BUL5 403 aaPredicted RBP38.06■■■■□ 3.68
TCF3-210ENST00000587235 SLAIN2Q9P270 581 aa38.06■■■■□ 3.68
TCF3-210ENST00000587235 DIP2AQ14689 1571 aa38.06■■■■□ 3.68
TCF3-210ENST00000587235 C14orf37Q86TY3 774 aa38.02■■■■□ 3.68
TCF3-210ENST00000587235 AMOTL2Q9Y2J4 779 aa38.02■■■■□ 3.68
TCF3-210ENST00000587235 NCOA3Q9Y6Q9 1424 aa38.02■■■■□ 3.68
TCF3-210ENST00000587235 ROBO1Q9Y6N7 1651 aa38.01■■■■□ 3.67
TCF3-210ENST00000587235 TRPM2O94759 1503 aa37.98■■■■□ 3.67
TCF3-210ENST00000587235 CLTCL1P53675 1640 aa37.98■■■■□ 3.67
TCF3-210ENST00000587235 SLC4A1APQ9BWU0 796 aaKnown RBP37.97■■■■□ 3.67
TCF3-210ENST00000587235 PTPRUQ92729 1446 aa37.96■■■■□ 3.67
TCF3-210ENST00000587235 C19orf44Q9H6X5 657 aa37.95■■■■□ 3.67
TCF3-210ENST00000587235 SETBP1Q9Y6X0 1596 aa37.92■■■■□ 3.66
TCF3-210ENST00000587235 NRXN3Q9Y4C0 1643 aa37.9■■■■□ 3.66
TCF3-210ENST00000587235 CADPS2Q86UW7 1296 aa37.9■■■■□ 3.66
TCF3-210ENST00000587235 ATF3P18847 181 aa37.89■■■■□ 3.66
TCF3-210ENST00000587235 METP08581 1390 aa37.87■■■■□ 3.65
TCF3-210ENST00000587235 KIF1BO60333 1816 aa37.87■■■■□ 3.65
TCF3-210ENST00000587235 NEXMIFQ5QGS0 1516 aa37.87■■■■□ 3.65
TCF3-210ENST00000587235 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.84■■■■□ 3.65
TCF3-210ENST00000587235 VGFO15240 615 aaPredicted RBP37.81■■■■□ 3.64
TCF3-210ENST00000587235 RGS17Q9UGC6 210 aaPredicted RBP37.81■■■■□ 3.64
TCF3-210ENST00000587235 FOXD1Q16676 465 aa37.8■■■■□ 3.64
TCF3-210ENST00000587235 PHLPP1O60346 1717 aa37.78■■■■□ 3.64
TCF3-210ENST00000587235 XRN1Q8IZH2 1706 aaKnown RBP37.78■■■■□ 3.64
TCF3-210ENST00000587235 RPGRIP1LQ68CZ1 1315 aa37.77■■■■□ 3.64
TCF3-210ENST00000587235 JCADQ9P266 1359 aa37.73■■■■□ 3.63
TCF3-210ENST00000587235 MPHOSPH9Q99550 1183 aa37.72■■■■□ 3.63
TCF3-210ENST00000587235 DCCP43146 1447 aa37.7■■■■□ 3.62
TCF3-210ENST00000587235 BRINP3Q76B58 766 aa37.68■■■■□ 3.62
TCF3-210ENST00000587235 COL16A1Q07092 1604 aaPredicted RBP37.65■■■■□ 3.62
TCF3-210ENST00000587235 ACIN1Q9UKV3 1341 aaKnown RBP37.65■■■■□ 3.62
TCF3-210ENST00000587235 CCDC144AA2RUR9 1427 aa37.61■■■■□ 3.61
TCF3-210ENST00000587235 AHDC1Q5TGY3 1603 aaPredicted RBP37.61■■■■□ 3.61
TCF3-210ENST00000587235 RGL3Q3MIN7 710 aa37.6■■■■□ 3.61
TCF3-210ENST00000587235 POTEAQ6S8J7 498 aa37.6■■■■□ 3.61
TCF3-210ENST00000587235 MST1RQ04912 1400 aa37.6■■■■□ 3.61
TCF3-210ENST00000587235 ADGRL3Q9HAR2 1447 aa37.6■■■■□ 3.61
TCF3-210ENST00000587235 PPLO60437 1756 aa37.58■■■■□ 3.61
TCF3-210ENST00000587235 SPATA31A6Q5VVP1 1343 aa37.56■■■■□ 3.6
TCF3-210ENST00000587235 SETD1AO15047 1707 aaKnown RBP37.56■■■■□ 3.6
TCF3-210ENST00000587235 ROBO2Q9HCK4 1378 aa37.55■■■■□ 3.6
TCF3-210ENST00000587235 SETD5Q9C0A6 1442 aa37.55■■■■□ 3.6
TCF3-210ENST00000587235 ADGRF5Q8IZF2 1346 aa37.54■■■■□ 3.6
TCF3-210ENST00000587235 PTCH1Q13635 1447 aa37.53■■■■□ 3.6
TCF3-210ENST00000587235 ASXL1Q8IXJ9 1541 aa37.52■■■■□ 3.6
TCF3-210ENST00000587235 SPATA31E1Q6ZUB1 1445 aa37.52■■■■□ 3.6
TCF3-210ENST00000587235 NALCNQ8IZF0 1738 aa37.5■■■■□ 3.59
TCF3-210ENST00000587235 ANKRD30BQ9BXX2 1392 aa37.46■■■■□ 3.59
TCF3-210ENST00000587235 MEX3CQ5U5Q3 659 aaKnown RBP37.46■■■■□ 3.59
TCF3-210ENST00000587235 PRAG1Q86YV5 1406 aa37.45■■■■□ 3.59
TCF3-210ENST00000587235 DDX17Q92841 729 aaKnown RBP37.45■■■■□ 3.59
TCF3-210ENST00000587235 LRP6O75581 1613 aa37.45■■■■□ 3.59
TCF3-210ENST00000587235 SHPRHQ149N8 1683 aa37.44■■■■□ 3.58
TCF3-210ENST00000587235 LRRC59Q96AG4 307 aaKnown RBP37.43■■■■□ 3.58
TCF3-210ENST00000587235 C1orf167Q5SNV9 1468 aa37.42■■■■□ 3.58
TCF3-210ENST00000587235 NUTM2BA6NNL0 878 aaPredicted RBP37.41■■■■□ 3.58
TCF3-210ENST00000587235 NUTM2EB1AL46 878 aaPredicted RBP37.41■■■■□ 3.58
TCF3-210ENST00000587235 NUTM2AQ8IVF1 878 aaPredicted RBP37.41■■■■□ 3.58
TCF3-210ENST00000587235 RAB3GAP2Q9H2M9 1393 aa37.4■■■■□ 3.58
TCF3-210ENST00000587235 NHSL1Q5SYE7 1610 aa37.39■■■■□ 3.58
TCF3-210ENST00000587235 STK26Q9P289 416 aa37.39■■■■□ 3.58
TCF3-210ENST00000587235 ORAI2Q96SN7 254 aa37.37■■■■□ 3.57
TCF3-210ENST00000587235 TMEM132EQ6IEE7 984 aa37.36■■■■□ 3.57
TCF3-210ENST00000587235 IFT172Q9UG01 1749 aa37.35■■■■□ 3.57
TCF3-210ENST00000587235 ZNF772Q68DY9 489 aaPredicted RBP37.33■■■■□ 3.57
TCF3-210ENST00000587235 WAPLQ7Z5K2 1190 aa37.32■■■■□ 3.56
TCF3-210ENST00000587235 LRPPRCP42704 1394 aaKnown RBP37.31■■■■□ 3.56
TCF3-210ENST00000587235 PIK3C2GO75747 1445 aa37.3■■■■□ 3.56
TCF3-210ENST00000587235 ABCC11Q96J66 1382 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms