RNA–Protein interactions for RNA: ENST00000586988.5

DNMT1-211, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-211ENST00000586988 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
DNMT1-211ENST00000586988 NEXMIFQ5QGS0 1516 aa16.96■□□□□ 0.3
DNMT1-211ENST00000586988 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
DNMT1-211ENST00000586988 DCAF11Q8TEB1 546 aa16.92■□□□□ 0.3
DNMT1-211ENST00000586988 SLIT1O75093 1534 aa16.91■□□□□ 0.3
DNMT1-211ENST00000586988 TMEM2Q9UHN6 1383 aa16.9■□□□□ 0.3
DNMT1-211ENST00000586988 ZFYVE9O95405 1425 aa16.9■□□□□ 0.3
DNMT1-211ENST00000586988 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
DNMT1-211ENST00000586988 PRAG1Q86YV5 1406 aa16.89■□□□□ 0.29
DNMT1-211ENST00000586988 ARHGAP23Q9P227 1491 aa16.89■□□□□ 0.29
DNMT1-211ENST00000586988 NRXN1Q9ULB1 1477 aa16.89■□□□□ 0.29
DNMT1-211ENST00000586988 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
DNMT1-211ENST00000586988 HDGFP51858 240 aaKnown RBP16.89■□□□□ 0.29
DNMT1-211ENST00000586988 THEMISQ8N1K5 641 aaPredicted RBP16.89■□□□□ 0.29
DNMT1-211ENST00000586988 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.88■□□□□ 0.29
DNMT1-211ENST00000586988 LAMC1P11047 1609 aa16.88■□□□□ 0.29
DNMT1-211ENST00000586988 VGFO15240 615 aaPredicted RBP16.87■□□□□ 0.29
DNMT1-211ENST00000586988 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
DNMT1-211ENST00000586988 KIAA1210Q9ULL0 1709 aa16.86■□□□□ 0.29
DNMT1-211ENST00000586988 PIK3C2GO75747 1445 aa16.86■□□□□ 0.29
DNMT1-211ENST00000586988 RALGAPBQ86X10 1494 aa16.86■□□□□ 0.29
DNMT1-211ENST00000586988 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
DNMT1-211ENST00000586988 SCAF11Q99590 1463 aaKnown RBP16.84■□□□□ 0.29
DNMT1-211ENST00000586988 POLR1AO95602 1720 aaPredicted RBP16.83■□□□□ 0.28
DNMT1-211ENST00000586988 LMTK3Q96Q04 1460 aa16.83■□□□□ 0.28
DNMT1-211ENST00000586988 EID1Q9Y6B2 187 aa16.83■□□□□ 0.28
DNMT1-211ENST00000586988 SETBP1Q9Y6X0 1596 aa16.83■□□□□ 0.28
DNMT1-211ENST00000586988 ADGRF5Q8IZF2 1346 aa16.81■□□□□ 0.28
DNMT1-211ENST00000586988 PLEKHG1Q9ULL1 1385 aa16.8■□□□□ 0.28
DNMT1-211ENST00000586988 IQGAP1P46940 1657 aa16.79■□□□□ 0.28
DNMT1-211ENST00000586988 NBPF8Q3BBV2 869 aa16.79■□□□□ 0.28
DNMT1-211ENST00000586988 DIP2AQ14689 1571 aa16.79■□□□□ 0.28
DNMT1-211ENST00000586988 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
DNMT1-211ENST00000586988 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
DNMT1-211ENST00000586988 TXNDC2Q86VQ3 553 aa16.78■□□□□ 0.28
DNMT1-211ENST00000586988 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
DNMT1-211ENST00000586988 ANKLE2Q86XL3 938 aa16.77■□□□□ 0.28
DNMT1-211ENST00000586988 GPRASP1Q5JY77 1395 aa16.77■□□□□ 0.27
DNMT1-211ENST00000586988 ALKQ9UM73 1620 aa16.76■□□□□ 0.27
DNMT1-211ENST00000586988 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
DNMT1-211ENST00000586988 MED14O60244 1454 aa16.75■□□□□ 0.27
DNMT1-211ENST00000586988 LTKP29376 864 aa16.74■□□□□ 0.27
DNMT1-211ENST00000586988 C14orf93Q9H972 538 aaKnown RBP16.74■□□□□ 0.27
DNMT1-211ENST00000586988 ADGRB1O14514 1584 aa16.73■□□□□ 0.27
DNMT1-211ENST00000586988 NPHP4O75161 1426 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-211ENST00000586988 BCANQ96GW7 911 aa16.72■□□□□ 0.27
DNMT1-211ENST00000586988 ADAMTS13Q76LX8 1427 aa16.71■□□□□ 0.27
DNMT1-211ENST00000586988 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.27
DNMT1-211ENST00000586988 CFAP70Q5T0N1 1121 aa16.71■□□□□ 0.27
DNMT1-211ENST00000586988 CARD11Q9BXL7 1154 aa16.71■□□□□ 0.27
DNMT1-211ENST00000586988 EIF3AQ14152 1382 aaKnown RBP16.7■□□□□ 0.26
DNMT1-211ENST00000586988 KNDC1Q76NI1 1749 aa16.68■□□□□ 0.26
DNMT1-211ENST00000586988 USP47Q96K76 1375 aa16.68■□□□□ 0.26
DNMT1-211ENST00000586988 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
DNMT1-211ENST00000586988 HSPA2P54652 639 aa16.67■□□□□ 0.26
DNMT1-211ENST00000586988 NBPF1Q3BBV0 1214 aa16.67■□□□□ 0.26
DNMT1-211ENST00000586988 TBX22Q9Y458 520 aa16.66■□□□□ 0.26
DNMT1-211ENST00000586988 STRCQ7RTU9 1775 aa16.66■□□□□ 0.26
DNMT1-211ENST00000586988 NCKAP5LQ9HCH0 1330 aa16.66■□□□□ 0.26
DNMT1-211ENST00000586988 YTHDC2Q9H6S0 1430 aaKnown RBP16.65■□□□□ 0.26
DNMT1-211ENST00000586988 ADRA2BP18089 450 aa16.65■□□□□ 0.26
DNMT1-211ENST00000586988 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
DNMT1-211ENST00000586988 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
DNMT1-211ENST00000586988 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
DNMT1-211ENST00000586988 CPS1P31327 1500 aa16.64■□□□□ 0.25
DNMT1-211ENST00000586988 METP08581 1390 aa16.64■□□□□ 0.25
DNMT1-211ENST00000586988 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
DNMT1-211ENST00000586988 TECPR2O15040 1411 aa16.62■□□□□ 0.25
DNMT1-211ENST00000586988 XRN1Q8IZH2 1706 aaKnown RBP16.62■□□□□ 0.25
DNMT1-211ENST00000586988 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
DNMT1-211ENST00000586988 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
DNMT1-211ENST00000586988 NWD1Q149M9 1564 aa16.61■□□□□ 0.25
DNMT1-211ENST00000586988 ABCC11Q96J66 1382 aa16.61■□□□□ 0.25
DNMT1-211ENST00000586988 PTCH1Q13635 1447 aa16.6■□□□□ 0.25
DNMT1-211ENST00000586988 CHD2O14647 1828 aaKnown RBP16.59■□□□□ 0.25
DNMT1-211ENST00000586988 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
DNMT1-211ENST00000586988 QRICH2Q9H0J4 1663 aa16.59■□□□□ 0.25
DNMT1-211ENST00000586988 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
DNMT1-211ENST00000586988 NKTRP30414 1462 aaKnown RBP16.57■□□□□ 0.24
DNMT1-211ENST00000586988 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
DNMT1-211ENST00000586988 SBNO2Q9Y2G9 1366 aa16.57■□□□□ 0.24
DNMT1-211ENST00000586988 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
DNMT1-211ENST00000586988 PTPRUQ92729 1446 aa16.56■□□□□ 0.24
DNMT1-211ENST00000586988 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-211ENST00000586988 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
DNMT1-211ENST00000586988 STK26Q9P289 416 aa16.56■□□□□ 0.24
DNMT1-211ENST00000586988 SLC24A1O60721 1099 aa16.55■□□□□ 0.24
DNMT1-211ENST00000586988 ST20-MTHFSA0A0A6YYL1 179 aa16.54■□□□□ 0.24
DNMT1-211ENST00000586988 SIRT1Q96EB6 747 aa16.54■□□□□ 0.24
DNMT1-211ENST00000586988 AMOTL2Q9Y2J4 779 aa16.53■□□□□ 0.24
DNMT1-211ENST00000586988 KCNA6P17658 529 aa16.52■□□□□ 0.24
DNMT1-211ENST00000586988 POGKQ9P215 609 aa16.52■□□□□ 0.24
DNMT1-211ENST00000586988 ROBO2Q9HCK4 1378 aa16.51■□□□□ 0.23
DNMT1-211ENST00000586988 ZNF316A6NFI3 1004 aaPredicted RBP16.51■□□□□ 0.23
DNMT1-211ENST00000586988 PRAM1Q96QH2 718 aa16.51■□□□□ 0.23
DNMT1-211ENST00000586988 ADGRB2O60241 1585 aa16.51■□□□□ 0.23
DNMT1-211ENST00000586988 TMF1P82094 1093 aa16.49■□□□□ 0.23
DNMT1-211ENST00000586988 TESK2Q96S53 571 aa16.49■□□□□ 0.23
DNMT1-211ENST00000586988 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
DNMT1-211ENST00000586988 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms