RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 ROCK2O75116 1388 aaKnown RBP12.07□□□□□ -0.48
NPC1-204ENST00000586718 ZNF142P52746 1687 aaPredicted RBP12.07□□□□□ -0.48
NPC1-204ENST00000586718 NBPF8Q3BBV2 869 aa12.07□□□□□ -0.48
NPC1-204ENST00000586718 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
NPC1-204ENST00000586718 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
NPC1-204ENST00000586718 IDI1Q13907 227 aa12.06□□□□□ -0.48
NPC1-204ENST00000586718 A2ML1A8K2U0 1454 aa12.06□□□□□ -0.48
NPC1-204ENST00000586718 IQGAP1P46940 1657 aa12.05□□□□□ -0.48
NPC1-204ENST00000586718 CEP170BQ9Y4F5 1589 aaPredicted RBP12.05□□□□□ -0.48
NPC1-204ENST00000586718 SETBP1Q9Y6X0 1596 aa12.05□□□□□ -0.48
NPC1-204ENST00000586718 GPRASP1Q5JY77 1395 aa12.05□□□□□ -0.48
NPC1-204ENST00000586718 PIK3C2GO75747 1445 aa12.04□□□□□ -0.48
NPC1-204ENST00000586718 ZFYVE9O95405 1425 aa12.04□□□□□ -0.48
NPC1-204ENST00000586718 EIF4G2P78344 907 aaKnown RBP eCLIP12.04□□□□□ -0.48
NPC1-204ENST00000586718 USP47Q96K76 1375 aa12.04□□□□□ -0.48
NPC1-204ENST00000586718 CARD11Q9BXL7 1154 aa12.03□□□□□ -0.48
NPC1-204ENST00000586718 RIMS2Q9UQ26 1411 aa12.03□□□□□ -0.48
NPC1-204ENST00000586718 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
NPC1-204ENST00000586718 PLPPR3Q6T4P5 718 aa12.02□□□□□ -0.49
NPC1-204ENST00000586718 EIF3AQ14152 1382 aaKnown RBP12.02□□□□□ -0.49
NPC1-204ENST00000586718 PTPRMP28827 1452 aa12.01□□□□□ -0.49
NPC1-204ENST00000586718 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
NPC1-204ENST00000586718 ABCF1Q8NE71 845 aaKnown RBP eCLIP12□□□□□ -0.49
NPC1-204ENST00000586718 SCAF11Q99590 1463 aaKnown RBP12□□□□□ -0.49
NPC1-204ENST00000586718 HSPA5P11021 654 aaKnown RBP11.99□□□□□ -0.49
NPC1-204ENST00000586718 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
NPC1-204ENST00000586718 ADGRF5Q8IZF2 1346 aa11.99□□□□□ -0.49
NPC1-204ENST00000586718 SLIT1O75093 1534 aa11.99□□□□□ -0.49
NPC1-204ENST00000586718 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
NPC1-204ENST00000586718 TMEM2Q9UHN6 1383 aa11.98□□□□□ -0.49
NPC1-204ENST00000586718 SETD1AO15047 1707 aaKnown RBP11.97□□□□□ -0.49
NPC1-204ENST00000586718 ADGRB1O14514 1584 aa11.96□□□□□ -0.49
NPC1-204ENST00000586718 ARHGAP23Q9P227 1491 aa11.96□□□□□ -0.49
NPC1-204ENST00000586718 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
NPC1-204ENST00000586718 NRXN3Q9Y4C0 1643 aa11.96□□□□□ -0.5
NPC1-204ENST00000586718 DIP2AQ14689 1571 aa11.96□□□□□ -0.5
NPC1-204ENST00000586718 ARHGEF28Q8N1W1 1705 aaKnown RBP11.95□□□□□ -0.5
NPC1-204ENST00000586718 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
NPC1-204ENST00000586718 QRICH2Q9H0J4 1663 aa11.94□□□□□ -0.5
NPC1-204ENST00000586718 THEMISQ8N1K5 641 aaPredicted RBP11.94□□□□□ -0.5
NPC1-204ENST00000586718 EID1Q9Y6B2 187 aa11.94□□□□□ -0.5
NPC1-204ENST00000586718 ASXL1Q8IXJ9 1541 aa11.94□□□□□ -0.5
NPC1-204ENST00000586718 NBPF1Q3BBV0 1214 aa11.93□□□□□ -0.5
NPC1-204ENST00000586718 CFAP70Q5T0N1 1121 aa11.93□□□□□ -0.5
NPC1-204ENST00000586718 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
NPC1-204ENST00000586718 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
NPC1-204ENST00000586718 PLEKHG1Q9ULL1 1385 aa11.92□□□□□ -0.5
NPC1-204ENST00000586718 HIRIP3Q9BW71 556 aaPredicted RBP11.92□□□□□ -0.5
NPC1-204ENST00000586718 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
NPC1-204ENST00000586718 BCANQ96GW7 911 aa11.9□□□□□ -0.5
NPC1-204ENST00000586718 DLC1Q96QB1 1528 aa11.9□□□□□ -0.5
NPC1-204ENST00000586718 CCDC7Q96M83 1385 aa11.9□□□□□ -0.5
NPC1-204ENST00000586718 YTHDC2Q9H6S0 1430 aaKnown RBP11.89□□□□□ -0.51
NPC1-204ENST00000586718 ST20-MTHFSA0A0A6YYL1 179 aa11.89□□□□□ -0.51
NPC1-204ENST00000586718 SLC24A1O60721 1099 aa11.89□□□□□ -0.51
NPC1-204ENST00000586718 CPS1P31327 1500 aa11.88□□□□□ -0.51
NPC1-204ENST00000586718 TXNDC2Q86VQ3 553 aa11.88□□□□□ -0.51
NPC1-204ENST00000586718 SBNO2Q9Y2G9 1366 aa11.88□□□□□ -0.51
NPC1-204ENST00000586718 CENPJQ9HC77 1338 aaPredicted RBP11.87□□□□□ -0.51
NPC1-204ENST00000586718 WASHC2AQ641Q2 1341 aa11.86□□□□□ -0.51
NPC1-204ENST00000586718 TMF1P82094 1093 aa11.86□□□□□ -0.51
NPC1-204ENST00000586718 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
NPC1-204ENST00000586718 LRPPRCP42704 1394 aaKnown RBP11.86□□□□□ -0.51
NPC1-204ENST00000586718 ADAMTS13Q76LX8 1427 aa11.86□□□□□ -0.51
NPC1-204ENST00000586718 KIF7Q2M1P5 1343 aa11.86□□□□□ -0.51
NPC1-204ENST00000586718 TMEM132EQ6IEE7 984 aa11.85□□□□□ -0.51
NPC1-204ENST00000586718 TRAK1Q9UPV9 953 aa11.85□□□□□ -0.51
NPC1-204ENST00000586718 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
NPC1-204ENST00000586718 POLR3GLQ9BT43 218 aa11.84□□□□□ -0.51
NPC1-204ENST00000586718 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
NPC1-204ENST00000586718 TECPR2O15040 1411 aa11.84□□□□□ -0.51
NPC1-204ENST00000586718 MED14O60244 1454 aa11.83□□□□□ -0.52
NPC1-204ENST00000586718 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
NPC1-204ENST00000586718 LTKP29376 864 aa11.83□□□□□ -0.52
NPC1-204ENST00000586718 PIK3R4Q99570 1358 aa11.82□□□□□ -0.52
NPC1-204ENST00000586718 DISP3Q9P2K9 1392 aa11.82□□□□□ -0.52
NPC1-204ENST00000586718 DDX10Q13206 875 aaKnown RBP11.82□□□□□ -0.52
NPC1-204ENST00000586718 TESK2Q96S53 571 aa11.82□□□□□ -0.52
NPC1-204ENST00000586718 STK26Q9P289 416 aa11.82□□□□□ -0.52
NPC1-204ENST00000586718 NPHP4O75161 1426 aaPredicted RBP11.82□□□□□ -0.52
NPC1-204ENST00000586718 MYOM1P52179 1685 aa11.81□□□□□ -0.52
NPC1-204ENST00000586718 ABCC11Q96J66 1382 aa11.81□□□□□ -0.52
NPC1-204ENST00000586718 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
NPC1-204ENST00000586718 FAM135BQ49AJ0 1406 aa11.81□□□□□ -0.52
NPC1-204ENST00000586718 KDM4FA0A1W2PPD8 638 aa11.81□□□□□ -0.52
NPC1-204ENST00000586718 POGKQ9P215 609 aa11.81□□□□□ -0.52
NPC1-204ENST00000586718 METP08581 1390 aa11.8□□□□□ -0.52
NPC1-204ENST00000586718 TULP4Q9NRJ4 1543 aa11.8□□□□□ -0.52
NPC1-204ENST00000586718 ADGRB2O60241 1585 aa11.79□□□□□ -0.52
NPC1-204ENST00000586718 LMTK3Q96Q04 1460 aa11.79□□□□□ -0.52
NPC1-204ENST00000586718 TBX22Q9Y458 520 aa11.79□□□□□ -0.52
NPC1-204ENST00000586718 NWD1Q149M9 1564 aa11.79□□□□□ -0.52
NPC1-204ENST00000586718 CHD2O14647 1828 aaKnown RBP11.79□□□□□ -0.52
NPC1-204ENST00000586718 C11orf95C9JLR9 678 aaPredicted RBP11.78□□□□□ -0.52
NPC1-204ENST00000586718 PRAM1Q96QH2 718 aa11.78□□□□□ -0.52
NPC1-204ENST00000586718 EVC2Q86UK5 1308 aa11.78□□□□□ -0.52
NPC1-204ENST00000586718 SLC26A8Q96RN1 970 aa11.77□□□□□ -0.53
NPC1-204ENST00000586718 SIRT1Q96EB6 747 aa11.76□□□□□ -0.53
NPC1-204ENST00000586718 ANP32CO43423 234 aa11.75□□□□□ -0.53
NPC1-204ENST00000586718 NINLQ9Y2I6 1382 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms