RNA–Protein interactions for RNA: ENST00000586680.1

COA3-202, Transcript of cytochrome c oxidase assembly factor 3, humanhuman

TSL 2

Gene COA3, Length 1,374 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA3-202ENST00000586680 CCDC144AA2RUR9 1427 aa28.47■■■□□ 2.15
COA3-202ENST00000586680 IQGAP1P46940 1657 aa28.47■■■□□ 2.15
COA3-202ENST00000586680 KIF1BO60333 1816 aa28.46■■■□□ 2.15
COA3-202ENST00000586680 SPATA31E1Q6ZUB1 1445 aa28.45■■■□□ 2.14
COA3-202ENST00000586680 SENP3Q9H4L4 574 aaPredicted RBP28.45■■■□□ 2.14
COA3-202ENST00000586680 PCGF6Q9BYE7 350 aa28.44■■■□□ 2.14
COA3-202ENST00000586680 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
COA3-202ENST00000586680 ZNF335Q9H4Z2 1342 aaPredicted RBP28.43■■■□□ 2.14
COA3-202ENST00000586680 NEXMIFQ5QGS0 1516 aa28.42■■■□□ 2.14
COA3-202ENST00000586680 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
COA3-202ENST00000586680 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.14
COA3-202ENST00000586680 LTBP4Q8N2S1 1624 aa28.38■■■□□ 2.13
COA3-202ENST00000586680 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.37■■■□□ 2.13
COA3-202ENST00000586680 RGL3Q3MIN7 710 aa28.37■■■□□ 2.13
COA3-202ENST00000586680 SLC26A8Q96RN1 970 aa28.37■■■□□ 2.13
COA3-202ENST00000586680 PPP1R15AO75807 674 aaPredicted RBP28.36■■■□□ 2.13
COA3-202ENST00000586680 HDGFP51858 240 aaKnown RBP28.35■■■□□ 2.13
COA3-202ENST00000586680 ADAMTS13Q76LX8 1427 aa28.34■■■□□ 2.13
COA3-202ENST00000586680 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
COA3-202ENST00000586680 NRXN3Q9Y4C0 1643 aa28.31■■■□□ 2.12
COA3-202ENST00000586680 PPLO60437 1756 aa28.31■■■□□ 2.12
COA3-202ENST00000586680 STRCP1A6NGW2 1772 aa28.3■■■□□ 2.12
COA3-202ENST00000586680 BCANQ96GW7 911 aa28.28■■■□□ 2.12
COA3-202ENST00000586680 ADGRF5Q8IZF2 1346 aa28.27■■■□□ 2.12
COA3-202ENST00000586680 IFT172Q9UG01 1749 aa28.26■■■□□ 2.12
COA3-202ENST00000586680 SETBP1Q9Y6X0 1596 aa28.26■■■□□ 2.11
COA3-202ENST00000586680 SIN3AQ96ST3 1273 aa28.24■■■□□ 2.11
COA3-202ENST00000586680 TBX22Q9Y458 520 aa28.24■■■□□ 2.11
COA3-202ENST00000586680 CERKQ8TCT0 537 aa28.24■■■□□ 2.11
COA3-202ENST00000586680 VGFO15240 615 aaPredicted RBP28.23■■■□□ 2.11
COA3-202ENST00000586680 PTPRUQ92729 1446 aa28.19■■■□□ 2.1
COA3-202ENST00000586680 METP08581 1390 aa28.19■■■□□ 2.1
COA3-202ENST00000586680 KCNA6P17658 529 aa28.18■■■□□ 2.1
COA3-202ENST00000586680 DIP2AQ14689 1571 aa28.18■■■□□ 2.1
COA3-202ENST00000586680 CPS1P31327 1500 aa28.16■■■□□ 2.1
COA3-202ENST00000586680 SETD1AO15047 1707 aaKnown RBP28.16■■■□□ 2.1
COA3-202ENST00000586680 NRXN1Q9ULB1 1477 aa28.15■■■□□ 2.1
COA3-202ENST00000586680 NWD1Q149M9 1564 aa28.15■■■□□ 2.1
COA3-202ENST00000586680 ALKQ9UM73 1620 aa28.15■■■□□ 2.1
COA3-202ENST00000586680 CHD2O14647 1828 aaKnown RBP28.15■■■□□ 2.1
COA3-202ENST00000586680 MYOM2P54296 1465 aa28.14■■■□□ 2.1
COA3-202ENST00000586680 LRRC7Q96NW7 1537 aa28.14■■■□□ 2.1
COA3-202ENST00000586680 PIK3C2GO75747 1445 aa28.13■■■□□ 2.09
COA3-202ENST00000586680 DCAF11Q8TEB1 546 aa28.11■■■□□ 2.09
COA3-202ENST00000586680 PIK3R4Q99570 1358 aa28.11■■■□□ 2.09
COA3-202ENST00000586680 NEUROD1Q13562 356 aa28.11■■■□□ 2.09
COA3-202ENST00000586680 KDM2AQ9Y2K7 1162 aa28.11■■■□□ 2.09
COA3-202ENST00000586680 RBM33Q96EV2 1170 aaKnown RBP28.1■■■□□ 2.09
COA3-202ENST00000586680 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
COA3-202ENST00000586680 ASXL1Q8IXJ9 1541 aa28.06■■■□□ 2.08
COA3-202ENST00000586680 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
COA3-202ENST00000586680 CFAP70Q5T0N1 1121 aa28.05■■■□□ 2.08
COA3-202ENST00000586680 NKTRP30414 1462 aaKnown RBP28.05■■■□□ 2.08
COA3-202ENST00000586680 IQSEC2Q5JU85 1478 aa28.05■■■□□ 2.08
COA3-202ENST00000586680 XRN1Q8IZH2 1706 aaKnown RBP28.05■■■□□ 2.08
COA3-202ENST00000586680 L3MBTL2Q969R5 705 aa28.04■■■□□ 2.08
COA3-202ENST00000586680 C14orf93Q9H972 538 aaKnown RBP28.04■■■□□ 2.08
COA3-202ENST00000586680 PROSER2Q86WR7 435 aaPredicted RBP28.03■■■□□ 2.08
COA3-202ENST00000586680 TMEM94Q12767 1356 aa28.03■■■□□ 2.08
COA3-202ENST00000586680 TMEM132EQ6IEE7 984 aa28.02■■■□□ 2.08
COA3-202ENST00000586680 STAC3Q96MF2 364 aa27.97■■■□□ 2.07
COA3-202ENST00000586680 ROBO2Q9HCK4 1378 aa27.95■■■□□ 2.07
COA3-202ENST00000586680 FBXO41Q8TF61 875 aa27.94■■■□□ 2.06
COA3-202ENST00000586680 PRAG1Q86YV5 1406 aa27.93■■■□□ 2.06
COA3-202ENST00000586680 ADGRB1O14514 1584 aa27.93■■■□□ 2.06
COA3-202ENST00000586680 LRPPRCP42704 1394 aaKnown RBP27.93■■■□□ 2.06
COA3-202ENST00000586680 STK26Q9P289 416 aa27.92■■■□□ 2.06
COA3-202ENST00000586680 ILDR1Q86SU0 546 aaPredicted RBP27.91■■■□□ 2.06
COA3-202ENST00000586680 LAMC1P11047 1609 aa27.9■■■□□ 2.06
COA3-202ENST00000586680 YTHDC2Q9H6S0 1430 aaKnown RBP27.9■■■□□ 2.06
COA3-202ENST00000586680 PTCH1Q13635 1447 aa27.89■■■□□ 2.06
COA3-202ENST00000586680 UBAP1LF5GYI3 381 aa27.89■■■□□ 2.06
COA3-202ENST00000586680 TECPR2O15040 1411 aa27.89■■■□□ 2.05
COA3-202ENST00000586680 ABCC11Q96J66 1382 aa27.88■■■□□ 2.05
COA3-202ENST00000586680 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
COA3-202ENST00000586680 NBPF8Q3BBV2 869 aa27.86■■■□□ 2.05
COA3-202ENST00000586680 NCOA3Q9Y6Q9 1424 aa27.86■■■□□ 2.05
COA3-202ENST00000586680 PLEKHH1Q9ULM0 1364 aa27.85■■■□□ 2.05
COA3-202ENST00000586680 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
COA3-202ENST00000586680 CCER1Q8TC90 406 aaPredicted RBP27.84■■■□□ 2.05
COA3-202ENST00000586680 TONSLQ96HA7 1378 aa27.83■■■□□ 2.05
COA3-202ENST00000586680 CLSPNQ9HAW4 1339 aa27.83■■■□□ 2.05
COA3-202ENST00000586680 KNDC1Q76NI1 1749 aa27.83■■■□□ 2.05
COA3-202ENST00000586680 KIAA1210Q9ULL0 1709 aa27.81■■■□□ 2.04
COA3-202ENST00000586680 TOM1O60784 492 aa27.8■■■□□ 2.04
COA3-202ENST00000586680 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.8■■■□□ 2.04
COA3-202ENST00000586680 MSH6P52701 1360 aa27.8■■■□□ 2.04
COA3-202ENST00000586680 NALCNQ8IZF0 1738 aa27.79■■■□□ 2.04
COA3-202ENST00000586680 C19orf44Q9H6X5 657 aa27.79■■■□□ 2.04
COA3-202ENST00000586680 C14orf37Q86TY3 774 aa27.78■■■□□ 2.04
COA3-202ENST00000586680 TRAK1Q9UPV9 953 aa27.78■■■□□ 2.04
COA3-202ENST00000586680 ADGRL3Q9HAR2 1447 aa27.78■■■□□ 2.04
COA3-202ENST00000586680 PIP4K2BP78356 416 aa27.77■■■□□ 2.04
COA3-202ENST00000586680 SIRT1Q96EB6 747 aa27.77■■■□□ 2.04
COA3-202ENST00000586680 TRPM1Q7Z4N2 1603 aa27.76■■■□□ 2.03
COA3-202ENST00000586680 FAM135BQ49AJ0 1406 aa27.75■■■□□ 2.03
COA3-202ENST00000586680 DLC1Q96QB1 1528 aa27.75■■■□□ 2.03
COA3-202ENST00000586680 PRAM1Q96QH2 718 aa27.73■■■□□ 2.03
COA3-202ENST00000586680 SAFB2Q14151 953 aaKnown RBP eCLIP27.7■■■□□ 2.02
COA3-202ENST00000586680 SLAIN2Q9P270 581 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms